Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0165 ATGACCTCCATCCACCACCACCACCACCACCACCACCTTTCCTCCAAATCCACCTCCACCTCCACCGTCTCCTCCTCCTCCTCCACCACCACCACCCAAGCCTGCGCCGCCTGCAAATACCAACGCCGCAAGTGCGCTCCCGATTGCATCCTTGCCCCCTACTTCCCTCACGATCGCCAACGCCAATTCTTAAACGCTCACAAACTCTTCGGCGTCAGCAACATCACCAAAATCATCAAGAATCTAGATCCTTTCGAGAAGGAAGAGGCAATGCGTACCATTATTTTTCAATCCGATGTCCGATCCCTCGATCCTGTCGGTGGTTGTTACCGCATAATTCGTGACCTTCAGCGCCAGATTGAGTACAGCAAGGCCGAGCTTGAGATTGTGCTTCATCAATTGGCTATTTGTAAGCAGCAGGCCGCCGCCGCTGCCATTCTCGACGCGGATCCCATGTCTGGATACGCCGGAATTGAGCATCAGTTTGTGGACGGATATGAAGGGGAAGGGTTTGTTGTTGGGGAAAATGAGAATGGGGAGAGTTTGGATGACGAAGTCCAGGTTTGGGGGATTCAGGATTCTGGAATGTCCTCGTGTTCTTCCTTGCAGTTGAAACACGGCGGCTCTGTTAATGATTTTCATGATATCAAAAGTGATGATTCTCATCACCACCACCACCATCATCAACAACAACTTCTTCTTAAGTTTCAACAGGATGATCATGACTTTCATCACAGTGAAGAAGCTATGCTGAAGATGGACAATGTAATGTTGAAAGAAGACTCTGGCCCAATACAACAGGCTCAAGATCAAGAGCTTAAAGGTGCAGTAGATACTTTATTTACCTTCCCAACTTGTGATACTTAG 867 48.79 MTSIHHHHHHHHLSSKSTSTSTVSSSSSTTTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKNLDPFEKEEAMRTIIFQSDVRSLDPVGGCYRIIRDLQRQIEYSKAELEIVLHQLAICKQQAAAAAILDADPMSGYAGIEHQFVDGYEGEGFVVGENENGESLDDEVQVWGIQDSGMSSCSSLQLKHGGSVNDFHDIKSDDSHHHHHHHQQQLLLKFQQDDHDFHHSEEAMLKMDNVMLKEDSGPIQQAQDQELKGAVDTLFTFPTCDT 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1515328 1516783 + Tan0008513.1 Tan06g0165 754869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0165 288 MobiDBLite consensus disorder prediction 1 26 - -
Tan06g0165 288 MobiDBLite consensus disorder prediction 1 15 - -
Tan06g0165 288 Pfam Lateral organ boundaries (LOB) domain 34 129 IPR004883 -
Tan06g0165 288 ProSiteProfiles LOB domain profile. 33 134 IPR004883 -
Tan06g0165 288 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 32 230 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0165 Tan-Chr6:1515328 Tan08g0946 Tan-Chr8:13911607 3.00E-23 dispersed
Tan05g0917 Tan-Chr5:7378777 Tan06g0165 Tan-Chr6:1515328 1.20E-19 transposed
Tan11g0550 Tan-Chr11:4815040 Tan06g0165 Tan-Chr6:1515328 2.10E-25 transposed
Tan02g1630 Tan-Chr2:75856632 Tan06g0165 Tan-Chr6:1515328 2.40E-27 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27680 PF03195 LOB 1.50E-35 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0165 - - - 0.0