Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan06g0202 | ATGACTCAGTGTAATATGTTTCAGGGATTTGAACTGATAATGGATCATTTGAACTGGGATGGATATGGATATGGAAATGGATCGAGACTTGCGACGAACATCGCGTCGTCGTCGTCGTCGTTTTGGAGCAATTACCAACAAGGAGTTGAAGAAAGGTTCATGATATCCAACTCAAATTCCCACTTCTTCAACTCAGTTCAAGACCTCCCAATTAAAGAAGCTGCAACTTCTTCAACAGATCTGGTTTCAAAAACAGGGAAGCCTCTGGTTATGAGCCCTCCATTGACAAGCTTTGCAGCAACATCTAAAGACATGGATGTTGCTGGCTATGAATCACAGCAGCTCCTCACTGGCTTCAATGGCGAAAAATCGACGACGGTCACGACATGCTCTCTCGAGTCATTGGACTGCTTGCTTTCAGCTACAAACAGCAACACAGACACATCAGTTGAAGATGATGGATCAGTGTCAATGATCCTAACAGATTACACCAATTTATGGAACTTTGGAGGCAATGCAGCAACTTCAAAAGAATCTGACAAGAATCTCTCAAATTCGACAAAGAGAAGCCATGATCAAACTCAATTCAAACCTGCAGATTACTCTGTTTTTTCTAATACCATCATAAATCTCTCTGATTCCACTTCAGATAGTGGAGGGTTTAGAATCATAACAGATGAAAATCTGCCAAAACAAAAGAAACCCAGATCAGAAAAGCCACCAAGTTCATCAAACATCAACTTTCAACAATCATGTTCATCAGGATCATCTTGTATTGATCAAGAGCCTGATCCAGAAGCCATTGCACAAATGAAGGAAATGATCTACAGAGCAGCAGCTTTTAGGCCAGTGAATTTGGGGCTAGAAGTGATAGAAAAGCCTAAAAGAAAGAATGTGAGAATCTCAACAGACCCACAAACTGTAGCAGCAAGACAAAGGAGAGAGAGAATCAGTGAAAGAATTAGGGTTTTGCAAAGGCTTGTTCCTGGTGGGAGCAAAATGGATACAGCATCAATGCTTGATGAAGCTGCAAATTATCTAAAGTTCTTGAAGTCTCAGATCAAAGCATTGGAGAATCTTGGGCAAAAGCTTGAGTCTTTGAATTGCCCTCCAACTACCATAGCTTTTTCTTTCAACCCATCTTTTCCCATACAAACATCTTCTTCATCATCCCATTCCCATAACCATCTTATTAACCAATATCCCCAAAACTAG | 1215 | 40.74 | MTQCNMFQGFELIMDHLNWDGYGYGNGSRLATNIASSSSSFWSNYQQGVEERFMISNSNSHFFNSVQDLPIKEAATSSTDLVSKTGKPLVMSPPLTSFAATSKDMDVAGYESQQLLTGFNGEKSTTVTTCSLESLDCLLSATNSNTDTSVEDDGSVSMILTDYTNLWNFGGNAATSKESDKNLSNSTKRSHDQTQFKPADYSVFSNTIINLSDSTSDSGGFRIITDENLPKQKKPRSEKPPSSSNINFQQSCSSGSSCIDQEPDPEAIAQMKEMIYRAAAFRPVNLGLEVIEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLKSQIKALENLGQKLESLNCPPTTIAFSFNPSFPIQTSSSSSHSHNHLINQYPQN | 404 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1768502 | 1769759 | + | Tan0008325.1 | Tan06g0202 | 754906 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan06g0202 | 404 | MobiDBLite | consensus disorder prediction | 174 | 194 | - | - | |
Tan06g0202 | 404 | MobiDBLite | consensus disorder prediction | 220 | 262 | - | - | |
Tan06g0202 | 404 | MobiDBLite | consensus disorder prediction | 385 | 404 | - | - | |
Tan06g0202 | 404 | FunFam | BHLH transcription factor | 304 | 368 | - | - | |
Tan06g0202 | 404 | SMART | finulus | 307 | 356 | IPR011598 | GO:0046983(InterPro) | |
Tan06g0202 | 404 | Gene3D | - | 306 | 369 | IPR036638 | GO:0046983(InterPro) | |
Tan06g0202 | 404 | MobiDBLite | consensus disorder prediction | 239 | 260 | - | - | |
Tan06g0202 | 404 | Coils | Coil | 340 | 367 | - | - | |
Tan06g0202 | 404 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 106 | 397 | IPR045843 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan06g0202 | 404 | Pfam | Helix-loop-helix DNA-binding domain | 310 | 351 | IPR011598 | GO:0046983(InterPro) | |
Tan06g0202 | 404 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 306 | 366 | IPR036638 | GO:0046983(InterPro) | |
Tan06g0202 | 404 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 301 | 350 | IPR011598 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g1685 | Tan-Chr5:49618688 | Tan06g0202 | Tan-Chr6:1768502 | 1.60E-29 | dispersed | |
Tan05g1754 | Tan-Chr5:54874455 | Tan06g0202 | Tan-Chr6:1768502 | 2.30E-25 | dispersed | |
Tan06g0202 | Tan-Chr6:1768502 | Tan11g1396 | Tan-Chr11:12413439 | 2.00E-12 | dispersed | |
Tan04g2726 | Tan-Chr4:86745543 | Tan06g0202 | Tan-Chr6:1768502 | 3.50E-37 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27681 | PF00010 | HLH | 7.50E-06 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan06g0202 | - | - | - | 0.0 |