Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0210 ATGATTATGGAAATATTAAGGCCTCTCCTCTTTGGTTTTCTGGGTTGTCTAGCTGCACTTCAAGTTCTCGTTCAAGCTCAAGATCAATCAGGCTTCTTAAGCCTAGATTGTGGATTACCAGCAAATTCTAGCTATGAAGAATCGACCACAGGCATCAACTATATTTCAGATGCAGCTTATATAACTAGTGGTGAAAGTCAAGATTTACCCTCCCAATACAAAGATATATATCAACGACAGATGTGGAAGGTTCGATACTTTTCAAATGGGACCAGGAACTGCTACAACATAAGCATTAATAGAGGTACCAAATATTTGATCCGAGTAAGTTTCTTGTACGGAAATTATGATGGTCTCAATAGGCTTCCCAAATTCAATCTCTACGTTGGACAAAGTTTGTGGGACGCAGTGGAGTTCACCAAGGTAGAGACTAGTGTATTGAAAGAAATCATACACATCACTTCAACAGATAATATATATATTTGTCTCATAAGCACAAACCAAGGAACACCATTCATCTCTGCATTGGAGTTCAGGCCTTTGCCCAACACTACTTATACAACTACAGCTGGATCGTTATCACTTATTTCTCGAGCTAATTTTGGTACAAATCAAACATACAGGTTTGGATATGATGTTTTTGATCGCATATGGACACCTTTTACCTACTACGAATGGACAAATATAAGTACATCAAACACGGTAGATTTCTCAAACCATGATATATATGAAGTACCATCTATTGTGATGAGTACTGCAGCAACTCCAACAAATTCTAGCAGTTCCTTGGAATTCAAGTGGAATCCAAATGAAGTAACTTCCCAATACTATGCTTACATGTACTCTGCTGAAATTGTAAAGCTTCAAGCGAACCAGACCAGAGTCTTTAATGTCAACCTAAATGGGCAGCACTTGTTTGGACCTTTATCTCCTATATACTTGGCCACCAGAACTTTTTATTCTGAAACAGCTCTGTATGAACCTAATGGCAAATACATAATCTCGTTAGCATCAACTGAGAATTCAACTCTTCCTCCTCTCATCAATGCATTTGAGGTTTATGAAGTGATATATCTCTCAGATTTACAAACAGACCCAGCAGATGTAAATGCCATTATGAGCATTAAGCTGACATATGGAGTAAACAAAGATTGGCAAGCAGACCCATGTCTTCCAAAAGCATATCCGTGGAGTGGCTTAATTTGTAACAATGACACTACTCCTAGAATCATATCGTTGGACTTGTCATCAAGTGACCTGACGGGTGAGATATCTCCTTATATAATCAATTTATCCATGTTACAAGCTTTAGACTTGTCAAATAATAGCTTATCAGGAAAGGTACCTGATTTCTTGGCCAGTATGTCAAGCCTCAAAGTGATAAAATTAGACAAAAACAACCTCACAGGTCCACTTCCACCCGAACTCCTAAAAAGAGTGAACAATGATTCGCTAGAACTAAGTGTGGAAGATAATCCAAATCTTGATGGTGCATGTGCCTCAGACTCGTGCACAGAGGAGAAGAAGAAAAGTTCTGGTGTACCTATAGTAGCATCAGTTGGTGGATTGCTTGTCATCCTCACAGTGGCAGCACCACGAGATCAAACTACAGTCCCAGTCCCAAGGGTGAAAGATACCAAACCCAGAAATGACTCATTAGAGGTAAGAAGACGACAATTTACATATGCTGAGGTAGTGAGAATGACAGATAATTTTTCAAGGCAACTGGGAGAAGGAGGTTCTGGAACAGTTTACCTTGGTCACATAGATAATGTACAAGTAGCTGTAAAGATGCTATCTACATTATCGGCCCATGGTTATCAGCAATTTCAAACAGAGGTGAAACTTCTCATGAGAGTTTACCATGGAAACTTGACAAGCCTTGTCGGGTATTTAAATGAAAATGGCCACTTTGGACTTATTTATGAGTATATGGCAAAGGGTAACTTAGCACAGGTCCTTTCAGAAAGTCCAGTTCTCTTAACCTGGGAAGATAGACTTCGGATAGCAATAGATGCAGCACAAGGACTGGAGTACCTGCATCATGGTTGTAAGCCACCCATAGTCCACAGAGATGTCAAAACAACAAACATCTTGCTGACAGAAAATTTCCAAGCCAAGCTTGCTGATTTCGGACTCTCCAAGAGTTTTCCAAACGATGGTAGCAAGACTCACATGTCCACAATGGTGGCTGGCACTCCTGGTTACTTTGATCCAGAATACTACACCTCGAACAGACTGACCGAGAAAAGTGATGTTTATAGCTTTGGAGTAGTATTGTTGGAGATAATTGCTTGTAGGCCAGTGATTTCCAGAGCTCAAGAGAAGGTTCACATAATTCAATGGGTGACCACCATGATTGAGCAAGGGGACATCAGGAAGGTGAGCGACCAAAGATTAAAAGGGGAATTCGATTCCAACTCTGCTTGGAAATCGGTGGAAATAGCATTGGCTTGTGTGTCTTCAAATTCAAGCAGTAGGCCGACGATGAACCAGGTGGTAACAGAACTGAAAAATTGCCTGGCCATGGAAATGAGTCGGAAGACACAGAATCGCTCTCTTGATTCAAGGGATTCCATTGAAACGTTCTCCATCTCCATTACCTTGCCAACATCCAGTCCCGAGGCAAGATGA 2634 40.62 MIMEILRPLLFGFLGCLAALQVLVQAQDQSGFLSLDCGLPANSSYEESTTGINYISDAAYITSGESQDLPSQYKDIYQRQMWKVRYFSNGTRNCYNISINRGTKYLIRVSFLYGNYDGLNRLPKFNLYVGQSLWDAVEFTKVETSVLKEIIHITSTDNIYICLISTNQGTPFISALEFRPLPNTTYTTTAGSLSLISRANFGTNQTYRFGYDVFDRIWTPFTYYEWTNISTSNTVDFSNHDIYEVPSIVMSTAATPTNSSSSLEFKWNPNEVTSQYYAYMYSAEIVKLQANQTRVFNVNLNGQHLFGPLSPIYLATRTFYSETALYEPNGKYIISLASTENSTLPPLINAFEVYEVIYLSDLQTDPADVNAIMSIKLTYGVNKDWQADPCLPKAYPWSGLICNNDTTPRIISLDLSSSDLTGEISPYIINLSMLQALDLSNNSLSGKVPDFLASMSSLKVIKLDKNNLTGPLPPELLKRVNNDSLELSVEDNPNLDGACASDSCTEEKKKSSGVPIVASVGGLLVILTVAAPRDQTTVPVPRVKDTKPRNDSLEVRRRQFTYAEVVRMTDNFSRQLGEGGSGTVYLGHIDNVQVAVKMLSTLSAHGYQQFQTEVKLLMRVYHGNLTSLVGYLNENGHFGLIYEYMAKGNLAQVLSESPVLLTWEDRLRIAIDAAQGLEYLHHGCKPPIVHRDVKTTNILLTENFQAKLADFGLSKSFPNDGSKTHMSTMVAGTPGYFDPEYYTSNRLTEKSDVYSFGVVLLEIIACRPVISRAQEKVHIIQWVTTMIEQGDIRKVSDQRLKGEFDSNSAWKSVEIALACVSSNSSSRPTMNQVVTELKNCLAMEMSRKTQNRSLDSRDSIETFSISITLPTSSPEAR 877
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1787537 1791353 - Tan0017962.1 Tan06g0210 754914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0210 877 ProSiteProfiles Protein kinase domain profile. 570 841 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g0210 877 CDD STKc_IRAK 576 839 - -
Tan06g0210 877 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 645 850 - -
Tan06g0210 877 SMART serkin_6 570 841 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g0210 877 SUPERFAMILY Protein kinase-like (PK-like) 554 837 IPR011009 -
Tan06g0210 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 688 700 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g0210 877 Gene3D Phosphorylase Kinase; domain 1 557 644 - -
Tan06g0210 877 Pfam Leucine Rich Repeat 434 455 IPR001611 GO:0005515(InterPro)
Tan06g0210 877 SUPERFAMILY L domain-like 394 481 - -
Tan06g0210 877 Gene3D Ribonuclease Inhibitor 370 490 IPR032675 -
Tan06g0210 877 Pfam Malectin-like domain 35 356 IPR024788 -
Tan06g0210 877 PANTHER OS07G0107800 PROTEIN-RELATED 23 847 - -
Tan06g0210 877 Pfam Protein tyrosine and serine/threonine kinase 572 837 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g0210 877 Gene3D Transferase(Phosphotransferase) domain 1 645 863 - -
Tan06g0210 877 ProSitePatterns Protein kinases ATP-binding region signature. 576 597 IPR017441 GO:0005524(InterPro)
Tan06g0210 877 FunFam Leucine-rich repeat receptor-like kinase 367 498 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0210 Tan-Chr6:1787537 Tan06g0215 Tan-Chr6:1814721 1.90E-278 dispersed
Tan06g0216 Tan-Chr6:1821698 Tan06g0210 Tan-Chr6:1787537 1.50E-47 dispersed
Tan06g0209 Tan-Chr6:1780850 Tan06g0210 Tan-Chr6:1787537 1.70E-136 tandem
Tan06g0210 Tan-Chr6:1787537 Tan06g0211 Tan-Chr6:1791895 3.50E-147 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67733 PF12819 Malectin_like 1.60E-109 CL0202 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0210 - - - 0.0