Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0215 ATGGGATTATCAGGGCTCCATTTCCTCTTTGGTTTTCTGCTATGCTGTCTAACTCTTCTACTTCTTGTTCAAGCCCAGGATCAGTCAGGCTTCATTAGTTTAGACTGTGGAACACCAGAGAGTACGAGTTACACTGAAACGACAACCAACATTAACTATGTTTCTGATGCACCCTACATAAACAGTGGTGTAAGTGGGAGCGTAGCTTCGATTTATGGAGACACCTACCAAAGGCAAATGAGGAAACTTAGAAGCTTCCCTCAAGGAATCAGAAATTGTTACAATGTAAGCGTGAAAAAGGATACCAAGTACTTGATTCGAGGGAATTTCTTATATGGGAATTACGATGGCCTGAATTCACTACCGAAGTTTGATCTCTATGTTGGGAATAGCTTATGGGAGACAGTAAACTTCACTGACGTTGGCATTGACGTTTTCAAAGATCTCATACATACTACCTCCTCAAATGAAGTTCACATCTGTTTGATCAATACAGGAAATGGGGTGCCGTTTATTTCAGCATTAGAGTTTAGACCTTTACCAAACGTCACTTATCAGACAGCATCGAGATCCTTATCACTAAACTTCCGGTTGGACATTGGTTCAACAGACAATCGATCGTACAGATTCCCGTTCGATATTTATGATCGCATCTGGTCACCATTTAACTTCAATGAGTGGACACAAGTGAGCACCAATCAAACTGTAGATGCTACTGATCACAACAATCACCAACCGCCATCCGTTGTCATGAAAACTGCTTCCACCCCATTAAATGCAAGCAAACCACTGGAACTTTGGTGGGATACAGTAGATTCATCTCAATATTATGTATTTATCCACTTTGCCGAAGTTGTAAAGCTTCAAGCCAACCAGAGTAGAGGATTCAATGTCATGCACAACGGGAATAACTTTTACGGACCTCTAATTCCAAGTTATTTGTCCACGCTGACCATTTTTAGCCAAAAACCATTGGATGCAGCAGCTAAACACACGTTTTCTTTAATTCCAATTGAGAATGCAACGCTTCCACCAATCATTAATGCTTTCGAGATATATATAGTCAAAGATATATCAGAGTTAGAAGCAGATAAAGGAGATGTGGATGCAATTACCAATATCAAGACAACCTATGGGGTAAAGAAGGATTGGCAAGGAGATCCATGTGTGCCAATGGGATATCCCTGGAGTGGATTAAATTGTGGCAATGAAGCAGCACCACGAATCATATCCTTGAACCTATCTGCAAGTGGACTGAACGGTGAAATATCTTCTTACATATCCAGTCTAACAATGTTGCAAACTTTGGACTTGTCAAACAATAATTTGACAGGGAAAGTGCCTGATTTCCTGTCTAGTTTATCACAACTCAAAATCCTGAACCTGGGTAACAACAAGCTCTCAGGTGAAATTCCGGTTGATCTTTTGAAAAGATCCAATGATGGCTCACTATCCTTAAGTGTGGGGGGTAACGAAAATCTTGATGGATGTGCATCAGATCCATGTCCTAAGAATAAAGAGAAGAAGAACATCATCATTCCAATTGTGGCATCAATTGGCGGATTCCTAGTTGTACTCACAATTGCTGCAATAACCTTTTGGATCATCAAATCTCGAAAGAAACAACAAAAAAGTAAAAATGTTGTCTCAGTGGCGGGTAAGTCAGAAACCAACAGTCAATTTGGCACTTCATTGGAGATGAGAAGACAATTTACATACTCTGAGGTGGTGCAAATGACGAACAATTTCAAAAAAGTTCTGGGTAAAGGAGGTTTTGGGGAGGTCTATTATGGTGTCATTGACGACATTCAAGTGGCTGTGAAGATGTTGTCTTTATCATCATCTCAAGGATATCAGCAATTTCAAGCAGAGGTTACCCTTCTTATGAGAGTTCACCATAAAAACTTGACAAGCCTTGTTGGATATTTGAATGAAGGAAAGCACCTCGGCCTCATTTATGAATATATGGCCAATGGAGATTTGGCAGAACACCTCTCAGAGAGGAGTCGACGCGTTTTAAGCTGGGAAGATAGACTTCGAATAGCAATGGATGCGGCTCAAGGACTGGAGTACCTGCATTATGGTTGTAAGCCACCCATAGTCCACAGAGACGTGAAAACAACAAACATCTTGTTGACAGAGAATTTTCAAGGAAAACTTGCAGATTTTGGTCTTTCCAAAACCTTCCCCACAGATGGCAACACTCACATGTCCACAGTTGTTGCTGGCACTCCTGGTTACCTTGATCCAGAGTACTTCGTATCAAACAGGCTGACAGAGAAAAGCGATGTGTACAGCTTTGGGATAGCTTTATTAGAGATAATCAGTTGCAAACCAGTAATATCAAGAACAGGAGATACACCTTATATAGGTCAATGGGTTACCTCTTTGGTGGCGCAAGGAGATATTCAGAGTATAATCGATCCAAGATTACAAGGGCAATATGAAACTAACTCTGTTTGGAAGACGGTGGAAGTGGCAATGGCTTGTCTAGCGGCAAATTCCAGCAGAAGGCCAACGATGAGCGACGTTGTGGCGGAACTCAAAGATTGCTTAGCCACAGAATTGAGTCGAGATTCAAGAAATTCCTTTGAAATGAGGTCCATCTCTGTTGGGGTTGGTGCTTCTGATTCTAGTCCAATGGCGAGGTGA 2652 41.33 MGLSGLHFLFGFLLCCLTLLLLVQAQDQSGFISLDCGTPESTSYTETTTNINYVSDAPYINSGVSGSVASIYGDTYQRQMRKLRSFPQGIRNCYNVSVKKDTKYLIRGNFLYGNYDGLNSLPKFDLYVGNSLWETVNFTDVGIDVFKDLIHTTSSNEVHICLINTGNGVPFISALEFRPLPNVTYQTASRSLSLNFRLDIGSTDNRSYRFPFDIYDRIWSPFNFNEWTQVSTNQTVDATDHNNHQPPSVVMKTASTPLNASKPLELWWDTVDSSQYYVFIHFAEVVKLQANQSRGFNVMHNGNNFYGPLIPSYLSTLTIFSQKPLDAAAKHTFSLIPIENATLPPIINAFEIYIVKDISELEADKGDVDAITNIKTTYGVKKDWQGDPCVPMGYPWSGLNCGNEAAPRIISLNLSASGLNGEISSYISSLTMLQTLDLSNNNLTGKVPDFLSSLSQLKILNLGNNKLSGEIPVDLLKRSNDGSLSLSVGGNENLDGCASDPCPKNKEKKNIIIPIVASIGGFLVVLTIAAITFWIIKSRKKQQKSKNVVSVAGKSETNSQFGTSLEMRRQFTYSEVVQMTNNFKKVLGKGGFGEVYYGVIDDIQVAVKMLSLSSSQGYQQFQAEVTLLMRVHHKNLTSLVGYLNEGKHLGLIYEYMANGDLAEHLSERSRRVLSWEDRLRIAMDAAQGLEYLHYGCKPPIVHRDVKTTNILLTENFQGKLADFGLSKTFPTDGNTHMSTVVAGTPGYLDPEYFVSNRLTEKSDVYSFGIALLEIISCKPVISRTGDTPYIGQWVTSLVAQGDIQSIIDPRLQGQYETNSVWKTVEVAMACLAANSSRRPTMSDVVAELKDCLATELSRDSRNSFEMRSISVGVGASDSSPMAR 883
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1814721 1818905 - Tan0000281.1 Tan06g0215 754919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0215 883 CDD STKc_IRAK 587 849 - -
Tan06g0215 883 SUPERFAMILY L domain-like 392 477 - -
Tan06g0215 883 Gene3D Transferase(Phosphotransferase) domain 1 656 871 - -
Tan06g0215 883 PANTHER OS07G0107800 PROTEIN-RELATED 22 857 - -
Tan06g0215 883 Gene3D Phosphorylase Kinase; domain 1 568 655 - -
Tan06g0215 883 Pfam Malectin-like domain 34 354 IPR024788 -
Tan06g0215 883 ProSitePatterns Protein kinases ATP-binding region signature. 587 608 IPR017441 GO:0005524(InterPro)
Tan06g0215 883 FunFam Leucine-rich repeat receptor-like protein kinase 554 655 - -
Tan06g0215 883 ProSiteProfiles Protein kinase domain profile. 581 852 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g0215 883 SUPERFAMILY Protein kinase-like (PK-like) 562 848 IPR011009 -
Tan06g0215 883 ProSitePatterns Serine/Threonine protein kinases active-site signature. 700 712 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g0215 883 PRINTS Leucine-rich repeat signature 433 446 - -
Tan06g0215 883 PRINTS Leucine-rich repeat signature 454 467 - -
Tan06g0215 883 Pfam Protein tyrosine and serine/threonine kinase 583 848 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g0215 883 ProSiteProfiles Leucine-rich repeat profile. 432 454 IPR001611 GO:0005515(InterPro)
Tan06g0215 883 Gene3D Ribonuclease Inhibitor 369 486 IPR032675 -
Tan06g0215 883 FunFam Leucine-rich repeat receptor-like kinase 366 496 - -
Tan06g0215 883 Pfam Leucine Rich repeats (2 copies) 432 468 IPR025875 -
Tan06g0215 883 SMART serkin_6 581 852 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g0215 883 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 656 861 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4187 Tan-Chr1:106640172 Tan06g0215 Tan-Chr6:1814721 5.50E-211 dispersed
Tan04g2707 Tan-Chr4:86538387 Tan06g0215 Tan-Chr6:1814721 5.60E-83 dispersed
Tan04g2708 Tan-Chr4:86564050 Tan06g0215 Tan-Chr6:1814721 9.70E-85 dispersed
Tan06g0208 Tan-Chr6:1780850 Tan06g0215 Tan-Chr6:1814721 1.40E-148 dispersed
Tan06g0209 Tan-Chr6:1780850 Tan06g0215 Tan-Chr6:1814721 2.40E-159 dispersed
Tan06g0210 Tan-Chr6:1787537 Tan06g0215 Tan-Chr6:1814721 1.90E-278 dispersed
Tan06g0211 Tan-Chr6:1791895 Tan06g0215 Tan-Chr6:1814721 1.80E-177 dispersed
Tan06g0212 Tan-Chr6:1801596 Tan06g0215 Tan-Chr6:1814721 7.80E-238 dispersed
Tan06g0213 Tan-Chr6:1810051 Tan06g0215 Tan-Chr6:1814721 7.30E-14 dispersed
Tan06g0215 Tan-Chr6:1814721 Tan06g0222 Tan-Chr6:1869574 9.50E-278 dispersed
Tan10g1869 Tan-Chr10:59311680 Tan06g0215 Tan-Chr6:1814721 1.20E-24 dispersed
Tan06g0214 Tan-Chr6:1810302 Tan06g0215 Tan-Chr6:1814721 2.80E-170 tandem
Tan06g0215 Tan-Chr6:1814721 Tan06g0216 Tan-Chr6:1821698 2.60E-47 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67736 PF12819 Malectin_like 2.50E-111 CL0202 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0215 - - - 0.0