Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0233 ATGGGGAAAGCTACCAGATGGTTGAAGGGTCTATTGGGGATCAAGAAAGATAAGGACCCATCTGGGAATTCTAATTCAAATCCAACGCCGGCTGCCGCCGACAGAAAGGAGAAGAAAAGATGGAGTTTTGCTAAGTCCACCAGAGATTCCGGCCAGACGCCGCCGCCTGCGGCGGCAGAGTCTGCTTGGTTCAGATCCTACATTTCTGATTCGGAGAAAGAGCAGAACAAGCACGCAATTGCCGTGGCTGCTGCCACTGCCGCCGCTGCTGACGCTGCCGTCGCCGCGGCTCAGGCGGCGGTTGCCGTCGTGCGTCTGACTAGTCAAGGAAGAGGGTCTCTGTATATCACTGGAAGAGATAGATGGGCTGCTGTGAAAATTCAAACAGTTTTTAGGGGCTATTTGGCTAGAAAGGCCCTGAGAGCTCTCAAAGGGCTTGTAAAATTGCAGGCTGTTGTTAGAGGATTTCTTGTGAGAAAAAGAGCTGCTGCAACTCTTCACAGTATGCAGGCTCTTTTTAGAGCTCAAACTGCAGTTAGGACTCAAAGGGCTCGTCGATCTTTCAATAAAGAGAACAGGTTTATCCCCGAGATTCGGCCCCGAAAATCTGCGGAACGGTTTGATGAAACAAGAAGTGAATTCCATAGTAAGAGGTTGTCTATAGCATCATCCTATGAAACCTGCATCAACTCATTGGATGAGAGCCCGAAAATTGTCGAAATCGACACCTACCGAACCCGATCGAGGTCTCGTAGGTACATCTCTGCATTGTCCGAATGCGGAGGAGATGATGTACCTCTTCAAGCAATCTCATCGCCATTGCCATGTCCGAATCGACCTCGCGTGTCTACGCCCGATTGCCACAATGTGCTTCGAGACTTCGAGTGGTGCTTGATGGGTGAAGACTGCAAGTTCCCTACAGCTCACAGCACACCCCGGCTATCGAATTCATTCGCCTCCGCTAACGTGCCAGTCACCCCGTCGAAGAGCGTCTGTGGTGACAGCTTCTTTAGGCCATACATGAACTGCCCGAATTATATGGCGAACACGCAGTCGTTCAAGGCGAAACTGAGGTCTCAAAGTGCCCCAAAGCAAAGGCCAGAACCAGGATCCAAGAAGAAGCTCTCATTGAATGAAATAATGGCAGCAAGAAACAGCTTAAGCAGTGTAAGAATGCAGAGACCAAGTAATCAAATGCTGCAAGAAGAAGGAGAAGAAGAAGAAGAAGATGAAGAAACATCATATGGATTTTGA 1254 49.36 MGKATRWLKGLLGIKKDKDPSGNSNSNPTPAAADRKEKKRWSFAKSTRDSGQTPPPAAAESAWFRSYISDSEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGSLYITGRDRWAAVKIQTVFRGYLARKALRALKGLVKLQAVVRGFLVRKRAAATLHSMQALFRAQTAVRTQRARRSFNKENRFIPEIRPRKSAERFDETRSEFHSKRLSIASSYETCINSLDESPKIVEIDTYRTRSRSRRYISALSECGGDDVPLQAISSPLPCPNRPRVSTPDCHNVLRDFEWCLMGEDCKFPTAHSTPRLSNSFASANVPVTPSKSVCGDSFFRPYMNCPNYMANTQSFKAKLRSQSAPKQRPEPGSKKKLSLNEIMAARNSLSSVRMQRPSNQMLQEEGEEEEEDEETSYGF 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1916509 1919060 - Tan0010989.1 Tan06g0233 754937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0233 417 Gene3D - 62 145 - -
Tan06g0233 417 ProSiteProfiles IQ motif profile. 120 148 - -
Tan06g0233 417 Pfam IQ calmodulin-binding motif 147 161 IPR000048 GO:0005515(InterPro)
Tan06g0233 417 Pfam IQ calmodulin-binding motif 121 141 IPR000048 GO:0005515(InterPro)
Tan06g0233 417 SMART iq_5 142 163 IPR000048 GO:0005515(InterPro)
Tan06g0233 417 SMART iq_5 119 141 IPR000048 GO:0005515(InterPro)
Tan06g0233 417 MobiDBLite consensus disorder prediction 356 417 - -
Tan06g0233 417 Pfam Protein of unknown function (DUF4005) 312 392 IPR025064 -
Tan06g0233 417 MobiDBLite consensus disorder prediction 381 399 - -
Tan06g0233 417 MobiDBLite consensus disorder prediction 402 417 - -
Tan06g0233 417 ProSiteProfiles IQ motif profile. 144 171 - -
Tan06g0233 417 ProSiteProfiles Zinc finger C3H1-type profile. 281 312 IPR000571 GO:0046872(InterPro)
Tan06g0233 417 MobiDBLite consensus disorder prediction 12 58 - -
Tan06g0233 417 PANTHER IQ-DOMAIN 5-RELATED 6 394 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0233 Tan-Chr6:1916509 Tan09g1205 Tan-Chr9:64343511 4.00E-93 dispersed
Tan04g2691 Tan-Chr4:86410449 Tan06g0233 Tan-Chr6:1916509 2.50E-65 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0233 - - - 0.0