Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0255 ATGGCTATGTCCTGCAAGGATGGTAACAAACATGGTATCGACAACGGCAAATACGTTCGGTACACACCGGAGCAGGTTGAAGCCCTTGAGCGGCTCTATCACGAATGCCCAAAACCCAGTTCCATTCGTCGTCAGCAGCTCATCAGAGAGTGCCCCATTCTCTCCAATATCGAGCCTAAGCAAATCAAAGTTTGGTTTCAAAATAGAAGATGTCGTGAAAAACAGAGGAAAGAGGCGTCTCGGCTTCAAGCTGTGAACAGGAAGCTTACGGCCATGAATAAGCTTTTAATGGAGGAGAATGATAGGCTGCAGAAGCAGGTTTCGCAGCTGGTGTATGAGAATGGCTATTTCCGCCAGCATACACAGAGTACGACGCTTGGAGCTAAAGATACAAGTTGTGAACCGGTGGTAACTAGCGGTCAACACAATTTGACATCTCAGCATCCTCCAAGGGATGCTAGCCCTGCAGGACTTTTGTCCATTGCAGAAGAGACTTTAACAGAGTTTCTTTCAAAGGCCACTGGAACTGCCGTGGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCCCTGGCGTGGCTGCACGTGCCTGTGGCCTGGTGGGTCTAGAGCCTACTAGAGTTGCTGAAATCCTCAAGGATCAGCCATCGTGGTTTCGCGATTGCCGAGCTGTGGATGTTCTAAATGTGCTGCCAACAGCAAATGGTGGAACCATTGAGCTGCTTTATATGCAGCTCTATGCGCCTACAACATTGGCGCCTGCTAGGGACTTCTGGTTGTTACGCTACACTTCTGTTTTGGAAGATGGTAGCCTTGTGATCTGTGAGAGATCACTTAAGAACACCCAGAATGGTCCAACCATGCCTCCAGTGCAGCATTTTGTTAGAGCAGAGATGTTGCCGAGTGGATATCTTATAAGGCCATGTGAAGGAGGTGGTTCTATCATTCATATTGTTGATCATATGGATCTGGAGCCATGGAGTGTTCCAGAAGTATTGCGTCCGTTGTATGAATCATCCACTGTTCTGGCTCAAAAGATGACTATGGCGGCTCTACGCCAGTTGAGGCTGATAGCTCATGAAGTGTCACAGTCGAATGTAACAGGATGGGGTAGACGCCCTGCAGCCTTACGTGCACTTGGTCAAAGGCTAACCCGGGGTTTTAATGAGGCACTTAATGGGTTTAACGACGAAGGGTGGTCCGTGATGGGAAATGATGGCATGGATGATGTAACCATTCTCATAAATTCGTCTCCTGACAAGCTAATGGGATTGAACATTTCATTTGCAAATGGATTTTCTTCAATCAGTAATGCAGTTTTATGTGCTAGAGCATCAATGTTGTTGCAGAATGTGCCTCCTGCAATTCTACTGAGGTTCCTGCGGGAGCACAGATCAGAATGGGCAGACAACAACATTGATGCTTATTCAGCTGCTGCTGTTAAGGTTGGCCCTTGGAGTTTACCAGGGTCCAGAGTTGGAAGTTTTGGGAATCAAGTAATACTTCCACTGGCTCACAACATTGAGCATGAAGAGTTTCTAGAAGTGATTAAACTGGAAGGCGTTGGGCATACTCCTGAAGATGCAATGATGCCTAGAGAAATGTTTCTTCTGCAACTCTGCAGTGGAATGGATGAAAATGCCATTGGCACATGTGCTGAACTAATATTTGCTCCAATTGATGCCTCTTTTGCTGATGACGCACCTCTTTTACCCTCAGGGTTTCGGATCATACCACTTGATTCCGGAAAGGAAGCATCCAGCCCAAATCGCACACTTGATCTCGCTTCTGCTCTAGAAATTGGGCCTGCTGGAAATAGAGCACCAAATGACTCGGTAAATTCTGGCTGTACGAGGTCTGTAATGACGATTGCATTTGAATTTGCATTTGAGAGCCATATGCAAGAACATGTGGCTTCAATGGCTCGACAATATGTCCGTAGTATTATATCGTCAGTCCAGAGGGTTGCGTTAGCTCTCTCACCTTCCCATTTAAGTTCACACGCTGGACTACGATCTCCACTTGGTACTCCTGAAGCACAGACACTTGCTCGTTGGATCTGCAACAGTTACAGGTGCTACTTGGGAGTGGAGCTGTTAAAATCTGGAAACGAAGGAGGAGGGGAGCTTGTCCTTAAAACATTGTGGCATCACTCGGATGCAATCATGTGCTGCTCTCTAAAGGCATTGCCAGTGTTCACCTTTGCAAATCAGGCAGGCCTTGACATGCTCGAGACAACCTTAGTTGCACTACAAGACATAACTTTGGAGAAGATATTTGACGACCATGGAAAAAAGACGCTCTGCTCAGAATTTCCACAGATAATGCAACAGGGATTTGCCTGTCTTCAAGGAGGCATATGCCTATCGAGCATGGGCCGACCTGTCTCGTATGAAAGAGCTGTGGCTTGGAAGGTACTGAATGAGGAGGAAAATGCACACTGCATCTGCTTTATGTTTGTGAACTGGTCTTTTGTCTGA 2517 46.84 MAMSCKDGNKHGIDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSTTLGAKDTSCEPVVTSGQHNLTSQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPTRVAEILKDQPSWFRDCRAVDVLNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTMAALRQLRLIAHEVSQSNVTGWGRRPAALRALGQRLTRGFNEALNGFNDEGWSVMGNDGMDDVTILINSSPDKLMGLNISFANGFSSISNAVLCARASMLLQNVPPAILLRFLREHRSEWADNNIDAYSAAAVKVGPWSLPGSRVGSFGNQVILPLAHNIEHEEFLEVIKLEGVGHTPEDAMMPREMFLLQLCSGMDENAIGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASSPNRTLDLASALEIGPAGNRAPNDSVNSGCTRSVMTIAFEFAFESHMQEHVASMARQYVRSIISSVQRVALALSPSHLSSHAGLRSPLGTPEAQTLARWICNSYRCYLGVELLKSGNEGGGELVLKTLWHHSDAIMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGKKTLCSEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFMFVNWSFV 838
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2072907 2080135 - Tan0002136.1 Tan06g0255 754959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0255 838 ProSiteProfiles START domain profile. 151 366 IPR002913 GO:0008289(InterPro)
Tan06g0255 838 SMART HOX_1 14 80 IPR001356 GO:0003677(InterPro)
Tan06g0255 838 Coils Coil 72 113 - -
Tan06g0255 838 FunFam homeobox-leucine zipper protein ATHB-15 196 377 - -
Tan06g0255 838 CDD homeodomain 17 77 IPR001356 GO:0003677(InterPro)
Tan06g0255 838 MobiDBLite consensus disorder prediction 128 154 - -
Tan06g0255 838 Gene3D - 195 371 IPR023393 -
Tan06g0255 838 CDD START_ArGLABRA2_like 155 368 - -
Tan06g0255 838 Pfam MEKHLA domain 694 837 IPR013978 -
Tan06g0255 838 SUPERFAMILY Homeodomain-like 16 80 IPR009057 -
Tan06g0255 838 CDD bZIP 69 108 - -
Tan06g0255 838 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 10 838 IPR044830 GO:0003700(InterPro)
Tan06g0255 838 Pfam START domain 161 368 IPR002913 GO:0008289(InterPro)
Tan06g0255 838 Gene3D - 10 83 - -
Tan06g0255 838 ProSiteProfiles 'Homeobox' domain profile. 12 76 IPR001356 GO:0003677(InterPro)
Tan06g0255 838 MobiDBLite consensus disorder prediction 128 150 - -
Tan06g0255 838 SMART START_1 160 370 IPR002913 GO:0008289(InterPro)
Tan06g0255 838 SUPERFAMILY Bet v1-like 160 367 - -
Tan06g0255 838 FunFam Homeobox-leucine zipper protein REVOLUTA 17 72 - -
Tan06g0255 838 Pfam Homeodomain 17 75 IPR001356 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3928 Tan-Chr1:104166355 Tan06g0255 Tan-Chr6:2072907 0.00E+00 dispersed
Tan05g2703 Tan-Chr5:78865713 Tan06g0255 Tan-Chr6:2072907 0.00E+00 dispersed
Tan06g0255 Tan-Chr6:2072907 Tan08g1178 Tan-Chr8:27536019 0.00E+00 dispersed
Tan06g0255 Tan-Chr6:2072907 Tan06g0256 Tan-Chr6:2072907 0.00E+00 tandem
Tan01g3927 Tan-Chr1:104165390 Tan06g0255 Tan-Chr6:2072907 0.00E+00 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27683 PF01852 START 5.00E-54 CL0209 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0255 K09338 - csv:101213106 1669.44