Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan06g0273 | ATGGCTTGGTTCACCATTGGAAGCTTTCAAGATTCCTTCAGCTTGCGCTCTTGCAAGGCTTATCTTGCTGAGTTCATCTCCACCTTGCTCTTCGTTTTCGCCGGTGTCGGCTCCGCCGTTGCCTACAATAAAATAACGTCGTCTGCAGCTCTAGATCCAGCGGGGCTAGTGGCGGTGGCGGTTTGCCATGGATTTGCTCTGTTTGTTGCAGTCTCTGTCGGAGCTAACATCTCCGGTGGCCATGTCAACCCGGCGGTGACGTTCGGGCTTCTTCTTGGAGATCAAATCAGCCTAATTACGACAATATTTTACTGGATCGCTCAGCTTCTTGGCTCCATTGTCGCCTGCTACCTTCTTAAATATGTCACCGGCGGCCTGGCGGTTCCGGTCCACAGTGTGGCGGCCGGTGTTGGGGCGGCGGAAGGAGTTGTAATGGAAATTGTCATCACCTTCGGTCTGGTTTACACTGTCTATGCGACGGCGGCCGACCCAAAGAAGGGATCTTTGGGAACAATTGCGCCAATTGCCATCGGTTTTATCGTCGGAGCAAACATATTGGCGGCCGGACCGTTTTCCGGTGGATCGATGAACCCGGCTCGGTCCTTTGGACCGGCGGTGGTCAGTGGGGACTTTCACGACAACTGGATTTACTGGGTTGGGCCGCTCGTTGGTGGTGGCTTAGCTGGGCTTATCTACTTTTACGCCTTTATGGCCTATGGGCCCAGCCCAATTCCAACCGATTACTAA | 747 | 53.82 | MAWFTIGSFQDSFSLRSCKAYLAEFISTLLFVFAGVGSAVAYNKITSSAALDPAGLVAVAVCHGFALFVAVSVGANISGGHVNPAVTFGLLLGDQISLITTIFYWIAQLLGSIVACYLLKYVTGGLAVPVHSVAAGVGAAEGVVMEIVITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFHDNWIYWVGPLVGGGLAGLIYFYAFMAYGPSPIPTDY | 248 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 2170720 | 2172878 | - | Tan0004598.1 | Tan06g0273 | 754977 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan06g0273 | 248 | Pfam | Major intrinsic protein | 15 | 232 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan06g0273 | 248 | Gene3D | Glycerol uptake facilitator protein. | 2 | 240 | IPR023271 | - | |
Tan06g0273 | 248 | PANTHER | AQUAPORIN-8 | 5 | 238 | IPR034294 | GO:0006833(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER) | |
Tan06g0273 | 248 | SUPERFAMILY | Aquaporin-like | 14 | 243 | IPR023271 | - | |
Tan06g0273 | 248 | CDD | MIP | 19 | 232 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan06g0273 | 248 | ProSitePatterns | MIP family signature. | 81 | 89 | IPR022357 | - | |
Tan06g0273 | 248 | NCBIfam | MIP family channel protein | 23 | 232 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan06g0273 | 248 | FunFam | Probable aquaporin TIP1-1 | 2 | 248 | - | - | |
Tan06g0273 | 248 | PRINTS | Major intrinsic protein family signature | 178 | 200 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan06g0273 | 248 | PRINTS | Major intrinsic protein family signature | 100 | 119 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan06g0273 | 248 | PRINTS | Major intrinsic protein family signature | 63 | 87 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan06g0273 | 248 | PRINTS | Major intrinsic protein family signature | 145 | 163 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan06g0273 | 248 | PRINTS | Major intrinsic protein family signature | 215 | 235 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan06g0273 | 248 | PRINTS | Major intrinsic protein family signature | 19 | 38 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g0273 | Tan-Chr6:2170720 | Tan08g1843 | Tan-Chr8:70567235 | 1.00E-72 | dispersed | |
Tan04g2514 | Tan-Chr4:84183998 | Tan06g0273 | Tan-Chr6:2170720 | 1.20E-25 | transposed | |
Tan07g0226 | Tan-Chr7:4883317 | Tan06g0273 | Tan-Chr6:2170720 | 1.10E-53 | transposed | |
Tan07g1804 | Tan-Chr7:69590827 | Tan06g0273 | Tan-Chr6:2170720 | 8.50E-99 | transposed | |
Tan10g0883 | Tan-Chr10:7392038 | Tan06g0273 | Tan-Chr6:2170720 | 9.50E-18 | transposed | |
Tan02g2564 | Tan-Chr2:94226151 | Tan06g0273 | Tan-Chr6:2170720 | 7.20E-58 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan06g0273 | K09873 | - | csv:101218611 | 441.425 |