Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan06g0291 | ATGGACACCGTTGATAACTATTTGATTTTTTGTTTTTGCAATTCCAATTTCCAAACCTTCTTAGCCCTTTTAATCCCACCGCCATTCATGGCCGTTGTCATTTCCGACAACCGCCCACCTCGCCGTGTTATTATGAATGTTCCTTCTTCTCCGGCTCTCTCTCTCACCCTTGCTGGGGTTTTTGGGAATGCGGCGGCGGCGGATGAGGGGGTGGACGCGCCGGCGAGGAGAGACGACAGCTGCAGTGACAACTCCGAGCCGGCAGGGTCGAGGTCGGCGGAGGATTTGGGCGCCGACCCTGATGATGAAGATGAAGATAAGTTACAAGGGAATAGAAAAAAGAGGAAGAATCGTCATAGTTCAGAGCAAATCAGAGAAATGGAGAAGGTGTTTAAAGAGTCACCTCATCCAGATGAGAAACAGCGGCAGCAACTCAGTGAGAAACTTGGTCTTCATTCTAAGCAAATCAAGTTCTGGTTTCAGAATCGTAGAACCCAAATCAAGGCCAGTCTCGAGCGTCAGGAAATGGAGAAATTGCGAAAGGAAAACCAAGCCATGAAGGAAATGATCAACAAATCTTCTTGCCCTAACTGTTGCTCTTCGGCTAATTCCATGGCTATTTCCATGGATTCCATTTTCACCAGTTCTGACCAACAACAACAACAATTAGTAACTGAAATCGTTCGACTCAATGCTGAGGTGGAGAGATTGCGAACGGCTCTGGAAAAATACGCTCCTGGTGGGACATCGACGTCGCGATCGGGGGAGAACGAGGAGGGGATTGAGGGGAGGAAGAATTTGGAGAAATCGAAGAGCATTTTGGGACTGGAGAAAGCTAGGGTTATGGAGATAGCGAAGCGAGCGATTGAGGAGGTCGTGAAAATGGCGGATTCAGGTGAGCCGCTTTGGGTTCGAAGCTTTGAAACAGGACGAGAACTACTGAATTACGATGAGTATATGAAGGAATTCGCGGCCGGAAACGAGCGGCCGAAGAGAGAAATCGAAGCGTCGAGAGAATCTGGCATCGTGTTCGTCGATCTTCACCGATTGGTTCAGAGCTTCATGGATGTGGTTCAATGGAAGGAAATGTTTCCATCGATAATCTCGAAGGCGTCGACTATGGAGGTCGTCTGCAATGGCGACGGGACCACCAGAAATGGCGCCGTTCAACTGATGTTTGCGGAACTCCAAATGCTGACTCCCACTGTCCCTCCAAGAGAGGTGTATTTCATTCGAAGTTGCAAGCAACTAAGCCCTGAAAAGTGGGTCGTCTCTGATGTCTCCATCGACAAAGTCAGAGATAGTATAGACTTATCCTCCACCCTTTGCAGGAAACGCCCCTCAGGTTGTATTATTGAGGACACATCTAACGGTCATTGTAAGGTCACATGGATAGAGCATTGGGAATGCCAGAAGATCGGACTTCGCACGATATATCGAACCATTGTGAATAGCGGTTTGATATTCGGGGCGAGGCATTGGATGGCGACGCTGCAAATCCATTGTGAGTGGCAGGTTTTCTTCATGGCCACCAACGTTCCCATGAAGGATTCCACTGGAATCACCACTCTTGGTGGGAGAAAAAGTGTTCTTCGATTGGCGCAGAGAATGACGTCTAGTATTTATCAAGCCATTGGTGCTTCGACTAGCCATACATGGACAAAGGTCCAGAGCAAAATAGGTGAAAACATAAGGGTTGCTTCAAGGAAGAACTTGAATGATCCACGAGAACCTCTTGGTTTGATCTTGTGTGCAGTTGCTTCTGTGTGGCTACCTGTTCCCCCTAAAGTCTTGTTTGAGTTCTTGATCGATGAATCTCGACGAATCGAGTGGGATGTGATGTTGAACAGTCCCGTTGAAACGCTAGCAACCTTTGCCAAAGGACAGAATCGAGGCAATGCTGTTACTATCCAAGCAATAAAATCAGATGAAACCAACCGGTGGATTATACAAGACAGTCTAACAAACGAATACGAATCAACAGTGGTCTATGCTCAAGTTGACATGACGAGCATTCAGGCTGTGATGGCAGGGCGTGACCCGAGCAACATCACGACGTTACCGATGGGGTTCTCGATCCTCCCTGATGGGCACCCACCAAGGCCATCGGTTATCAGCTCAAGCAAAGAGGAGAGGGAAACAGAAGGAGGTTCATTACTAACAATAGCATCTCAAATTCCAGTTAGTTCCTCCCCCACAGCTGAAACGACGTCGCAGTCTGTTGAGTATGTAAACGATTTTATATCACATACGTTAGAAAATATTAAAGCAAGCTTGCAAGGCGAGGATGATTGA | 2295 | 47.58 | MDTVDNYLIFCFCNSNFQTFLALLIPPPFMAVVISDNRPPRRVIMNVPSSPALSLTLAGVFGNAAAADEGVDAPARRDDSCSDNSEPAGSRSAEDLGADPDDEDEDKLQGNRKKRKNRHSSEQIREMEKVFKESPHPDEKQRQQLSEKLGLHSKQIKFWFQNRRTQIKASLERQEMEKLRKENQAMKEMINKSSCPNCCSSANSMAISMDSIFTSSDQQQQQLVTEIVRLNAEVERLRTALEKYAPGGTSTSRSGENEEGIEGRKNLEKSKSILGLEKARVMEIAKRAIEEVVKMADSGEPLWVRSFETGRELLNYDEYMKEFAAGNERPKREIEASRESGIVFVDLHRLVQSFMDVVQWKEMFPSIISKASTMEVVCNGDGTTRNGAVQLMFAELQMLTPTVPPREVYFIRSCKQLSPEKWVVSDVSIDKVRDSIDLSSTLCRKRPSGCIIEDTSNGHCKVTWIEHWECQKIGLRTIYRTIVNSGLIFGARHWMATLQIHCEWQVFFMATNVPMKDSTGITTLGGRKSVLRLAQRMTSSIYQAIGASTSHTWTKVQSKIGENIRVASRKNLNDPREPLGLILCAVASVWLPVPPKVLFEFLIDESRRIEWDVMLNSPVETLATFAKGQNRGNAVTIQAIKSDETNRWIIQDSLTNEYESTVVYAQVDMTSIQAVMAGRDPSNITTLPMGFSILPDGHPPRPSVISSSKEERETEGGSLLTIASQIPVSSSPTAETTSQSVEYVNDFISHTLENIKASLQGEDD | 764 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 2295997 | 2304654 | + | Tan0003008.1 | Tan06g0291 | 754995 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan06g0291 | 764 | Coils | Coil | 162 | 189 | - | - | |
Tan06g0291 | 764 | SUPERFAMILY | Bet v1-like | 547 | 753 | - | - | |
Tan06g0291 | 764 | SMART | HOX_1 | 112 | 174 | IPR001356 | GO:0003677(InterPro) | |
Tan06g0291 | 764 | ProSiteProfiles | START domain profile. | 274 | 507 | IPR002913 | GO:0008289(InterPro) | |
Tan06g0291 | 764 | ProSiteProfiles | 'Homeobox' domain profile. | 110 | 170 | IPR001356 | GO:0003677(InterPro) | |
Tan06g0291 | 764 | SUPERFAMILY | Homeodomain-like | 103 | 168 | IPR009057 | - | |
Tan06g0291 | 764 | SMART | START_1 | 283 | 504 | IPR002913 | GO:0008289(InterPro) | |
Tan06g0291 | 764 | Pfam | START domain | 283 | 503 | IPR002913 | GO:0008289(InterPro) | |
Tan06g0291 | 764 | SUPERFAMILY | Bet v1-like | 277 | 503 | - | - | |
Tan06g0291 | 764 | FunFam | Homeobox-leucine zipper protein GLABRA 2 | 283 | 503 | - | - | |
Tan06g0291 | 764 | MobiDBLite | consensus disorder prediction | 718 | 737 | - | - | |
Tan06g0291 | 764 | CDD | START_ArGLABRA2_like | 278 | 503 | - | - | |
Tan06g0291 | 764 | Pfam | Homeodomain | 113 | 168 | IPR001356 | GO:0003677(InterPro) | |
Tan06g0291 | 764 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 | 102 | 760 | IPR042160 | - | |
Tan06g0291 | 764 | Gene3D | - | 89 | 169 | - | - | |
Tan06g0291 | 764 | MobiDBLite | consensus disorder prediction | 241 | 264 | - | - | |
Tan06g0291 | 764 | MobiDBLite | consensus disorder prediction | 71 | 123 | - | - | |
Tan06g0291 | 764 | FunFam | Homeobox-leucine zipper protein HDG1 | 99 | 186 | - | - | |
Tan06g0291 | 764 | CDD | homeodomain | 113 | 168 | IPR001356 | GO:0003677(InterPro) | |
Tan06g0291 | 764 | Coils | Coil | 220 | 240 | - | - | |
Tan06g0291 | 764 | MobiDBLite | consensus disorder prediction | 693 | 737 | - | - | |
Tan06g0291 | 764 | ProSitePatterns | 'Homeobox' domain signature. | 145 | 168 | IPR017970 | GO:0000981(InterPro)|GO:0006355(InterPro) | |
Tan06g0291 | 764 | Gene3D | - | 282 | 503 | IPR023393 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g0291 | Tan-Chr6:2295997 | Tan06g2109 | Tan-Chr6:69929122 | 1.10E-133 | dispersed | |
Tan04g2664 | Tan-Chr4:86005115 | Tan06g0291 | Tan-Chr6:2295997 | 1.30E-203 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27688 | PF01852 | START | 5.10E-51 | CL0209 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan06g0291 | K09338 | - | csv:101218545 | 1145.57 |