Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0291 ATGGACACCGTTGATAACTATTTGATTTTTTGTTTTTGCAATTCCAATTTCCAAACCTTCTTAGCCCTTTTAATCCCACCGCCATTCATGGCCGTTGTCATTTCCGACAACCGCCCACCTCGCCGTGTTATTATGAATGTTCCTTCTTCTCCGGCTCTCTCTCTCACCCTTGCTGGGGTTTTTGGGAATGCGGCGGCGGCGGATGAGGGGGTGGACGCGCCGGCGAGGAGAGACGACAGCTGCAGTGACAACTCCGAGCCGGCAGGGTCGAGGTCGGCGGAGGATTTGGGCGCCGACCCTGATGATGAAGATGAAGATAAGTTACAAGGGAATAGAAAAAAGAGGAAGAATCGTCATAGTTCAGAGCAAATCAGAGAAATGGAGAAGGTGTTTAAAGAGTCACCTCATCCAGATGAGAAACAGCGGCAGCAACTCAGTGAGAAACTTGGTCTTCATTCTAAGCAAATCAAGTTCTGGTTTCAGAATCGTAGAACCCAAATCAAGGCCAGTCTCGAGCGTCAGGAAATGGAGAAATTGCGAAAGGAAAACCAAGCCATGAAGGAAATGATCAACAAATCTTCTTGCCCTAACTGTTGCTCTTCGGCTAATTCCATGGCTATTTCCATGGATTCCATTTTCACCAGTTCTGACCAACAACAACAACAATTAGTAACTGAAATCGTTCGACTCAATGCTGAGGTGGAGAGATTGCGAACGGCTCTGGAAAAATACGCTCCTGGTGGGACATCGACGTCGCGATCGGGGGAGAACGAGGAGGGGATTGAGGGGAGGAAGAATTTGGAGAAATCGAAGAGCATTTTGGGACTGGAGAAAGCTAGGGTTATGGAGATAGCGAAGCGAGCGATTGAGGAGGTCGTGAAAATGGCGGATTCAGGTGAGCCGCTTTGGGTTCGAAGCTTTGAAACAGGACGAGAACTACTGAATTACGATGAGTATATGAAGGAATTCGCGGCCGGAAACGAGCGGCCGAAGAGAGAAATCGAAGCGTCGAGAGAATCTGGCATCGTGTTCGTCGATCTTCACCGATTGGTTCAGAGCTTCATGGATGTGGTTCAATGGAAGGAAATGTTTCCATCGATAATCTCGAAGGCGTCGACTATGGAGGTCGTCTGCAATGGCGACGGGACCACCAGAAATGGCGCCGTTCAACTGATGTTTGCGGAACTCCAAATGCTGACTCCCACTGTCCCTCCAAGAGAGGTGTATTTCATTCGAAGTTGCAAGCAACTAAGCCCTGAAAAGTGGGTCGTCTCTGATGTCTCCATCGACAAAGTCAGAGATAGTATAGACTTATCCTCCACCCTTTGCAGGAAACGCCCCTCAGGTTGTATTATTGAGGACACATCTAACGGTCATTGTAAGGTCACATGGATAGAGCATTGGGAATGCCAGAAGATCGGACTTCGCACGATATATCGAACCATTGTGAATAGCGGTTTGATATTCGGGGCGAGGCATTGGATGGCGACGCTGCAAATCCATTGTGAGTGGCAGGTTTTCTTCATGGCCACCAACGTTCCCATGAAGGATTCCACTGGAATCACCACTCTTGGTGGGAGAAAAAGTGTTCTTCGATTGGCGCAGAGAATGACGTCTAGTATTTATCAAGCCATTGGTGCTTCGACTAGCCATACATGGACAAAGGTCCAGAGCAAAATAGGTGAAAACATAAGGGTTGCTTCAAGGAAGAACTTGAATGATCCACGAGAACCTCTTGGTTTGATCTTGTGTGCAGTTGCTTCTGTGTGGCTACCTGTTCCCCCTAAAGTCTTGTTTGAGTTCTTGATCGATGAATCTCGACGAATCGAGTGGGATGTGATGTTGAACAGTCCCGTTGAAACGCTAGCAACCTTTGCCAAAGGACAGAATCGAGGCAATGCTGTTACTATCCAAGCAATAAAATCAGATGAAACCAACCGGTGGATTATACAAGACAGTCTAACAAACGAATACGAATCAACAGTGGTCTATGCTCAAGTTGACATGACGAGCATTCAGGCTGTGATGGCAGGGCGTGACCCGAGCAACATCACGACGTTACCGATGGGGTTCTCGATCCTCCCTGATGGGCACCCACCAAGGCCATCGGTTATCAGCTCAAGCAAAGAGGAGAGGGAAACAGAAGGAGGTTCATTACTAACAATAGCATCTCAAATTCCAGTTAGTTCCTCCCCCACAGCTGAAACGACGTCGCAGTCTGTTGAGTATGTAAACGATTTTATATCACATACGTTAGAAAATATTAAAGCAAGCTTGCAAGGCGAGGATGATTGA 2295 47.58 MDTVDNYLIFCFCNSNFQTFLALLIPPPFMAVVISDNRPPRRVIMNVPSSPALSLTLAGVFGNAAAADEGVDAPARRDDSCSDNSEPAGSRSAEDLGADPDDEDEDKLQGNRKKRKNRHSSEQIREMEKVFKESPHPDEKQRQQLSEKLGLHSKQIKFWFQNRRTQIKASLERQEMEKLRKENQAMKEMINKSSCPNCCSSANSMAISMDSIFTSSDQQQQQLVTEIVRLNAEVERLRTALEKYAPGGTSTSRSGENEEGIEGRKNLEKSKSILGLEKARVMEIAKRAIEEVVKMADSGEPLWVRSFETGRELLNYDEYMKEFAAGNERPKREIEASRESGIVFVDLHRLVQSFMDVVQWKEMFPSIISKASTMEVVCNGDGTTRNGAVQLMFAELQMLTPTVPPREVYFIRSCKQLSPEKWVVSDVSIDKVRDSIDLSSTLCRKRPSGCIIEDTSNGHCKVTWIEHWECQKIGLRTIYRTIVNSGLIFGARHWMATLQIHCEWQVFFMATNVPMKDSTGITTLGGRKSVLRLAQRMTSSIYQAIGASTSHTWTKVQSKIGENIRVASRKNLNDPREPLGLILCAVASVWLPVPPKVLFEFLIDESRRIEWDVMLNSPVETLATFAKGQNRGNAVTIQAIKSDETNRWIIQDSLTNEYESTVVYAQVDMTSIQAVMAGRDPSNITTLPMGFSILPDGHPPRPSVISSSKEERETEGGSLLTIASQIPVSSSPTAETTSQSVEYVNDFISHTLENIKASLQGEDD 764
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2295997 2304654 + Tan0003008.1 Tan06g0291 754995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0291 764 Coils Coil 162 189 - -
Tan06g0291 764 SUPERFAMILY Bet v1-like 547 753 - -
Tan06g0291 764 SMART HOX_1 112 174 IPR001356 GO:0003677(InterPro)
Tan06g0291 764 ProSiteProfiles START domain profile. 274 507 IPR002913 GO:0008289(InterPro)
Tan06g0291 764 ProSiteProfiles 'Homeobox' domain profile. 110 170 IPR001356 GO:0003677(InterPro)
Tan06g0291 764 SUPERFAMILY Homeodomain-like 103 168 IPR009057 -
Tan06g0291 764 SMART START_1 283 504 IPR002913 GO:0008289(InterPro)
Tan06g0291 764 Pfam START domain 283 503 IPR002913 GO:0008289(InterPro)
Tan06g0291 764 SUPERFAMILY Bet v1-like 277 503 - -
Tan06g0291 764 FunFam Homeobox-leucine zipper protein GLABRA 2 283 503 - -
Tan06g0291 764 MobiDBLite consensus disorder prediction 718 737 - -
Tan06g0291 764 CDD START_ArGLABRA2_like 278 503 - -
Tan06g0291 764 Pfam Homeodomain 113 168 IPR001356 GO:0003677(InterPro)
Tan06g0291 764 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 102 760 IPR042160 -
Tan06g0291 764 Gene3D - 89 169 - -
Tan06g0291 764 MobiDBLite consensus disorder prediction 241 264 - -
Tan06g0291 764 MobiDBLite consensus disorder prediction 71 123 - -
Tan06g0291 764 FunFam Homeobox-leucine zipper protein HDG1 99 186 - -
Tan06g0291 764 CDD homeodomain 113 168 IPR001356 GO:0003677(InterPro)
Tan06g0291 764 Coils Coil 220 240 - -
Tan06g0291 764 MobiDBLite consensus disorder prediction 693 737 - -
Tan06g0291 764 ProSitePatterns 'Homeobox' domain signature. 145 168 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Tan06g0291 764 Gene3D - 282 503 IPR023393 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0291 Tan-Chr6:2295997 Tan06g2109 Tan-Chr6:69929122 1.10E-133 dispersed
Tan04g2664 Tan-Chr4:86005115 Tan06g0291 Tan-Chr6:2295997 1.30E-203 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27688 PF01852 START 5.10E-51 CL0209 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0291 K09338 - csv:101218545 1145.57