Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0306 ATGGATTTCTGGCCAGAGTTCCTTGCAAGCAGTTGGGGTAGAGAATTTGTCGCCGGTGGATTTGGTGGCATCGCCGGCATAATCTCCGGCTACCCACTTGATACTCTTCGAGTCAGGCAACAGCAATCGATTTCTGGTTCTGCTTTGAAAATCTTTCGCAATATTATCGCCAACGATGGCCCTGCTGGTCTTTACAGAGGCATGGCTGCTCCCTTGGCTTCTGTCACTTTCCAGAACGCCGCCGTGTTTCAGATCTACGCCGTTCTTTCTCGGGCATTCAACTCCTCTCGATCCAACGGTGACCCTCCAAGCTATAAGGCTGTGGCTTTTGGAGGATTTGGCACCGGAGCTCTTCAGAGCTTCATCCTGTCACCGGTGGAGCTGGTGAAGATCCGCCTGCAATTGCAAAGTTCAAGCCATTCAGTATCACAACAAAAATTAATTTCTTCTTCTCACAGAGGCCCTGTGAGCGTAGCCAAAAGCATCTACAAAACAGAAGGATTGAGAGGGATTTACAGAGGACTTACCATAACCATGCTCAGAGATGCACCGGCACATGGCATCTATTTCTGGACATATGAATGCATGAGAGAGAAGTTTCATCCAGGCTGCCGGAAGACCGGCCAAGAGAGCGTCAGCACAATGCTGGTTGCCGGAGGGCTCGCCGGAGTTGCCAGCTGGGTTTTTTGTTATCCCTTGGATGTGTTGAAGACAAGAATTCAGGGCCAGACACAAAGTTCATCTCGAAAGTACAATGGAATTGTTGATTGTCTTAGCAAGAGTGTGAGAGAAGAAGGTTACAGAGTGCTGTGGCGAGGGCTGGGCACTGCGGTTGCTAGAGCATTTGTGGTTAATGGGGCCATTTTTGCTGCTTATGAGATAAGTTTGAGGTATTTGTTTAGCAATGGAAACAATCAGACACAACAATGA 930 48.6 MDFWPEFLASSWGREFVAGGFGGIAGIISGYPLDTLRVRQQQSISGSALKIFRNIIANDGPAGLYRGMAAPLASVTFQNAAVFQIYAVLSRAFNSSRSNGDPPSYKAVAFGGFGTGALQSFILSPVELVKIRLQLQSSSHSVSQQKLISSSHRGPVSVAKSIYKTEGLRGIYRGLTITMLRDAPAHGIYFWTYECMREKFHPGCRKTGQESVSTMLVAGGLAGVASWVFCYPLDVLKTRIQGQTQSSSRKYNGIVDCLSKSVREEGYRVLWRGLGTAVARAFVVNGAIFAAYEISLRYLFSNGNNQTQQ 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2379756 2381540 - Tan0011821.2 Tan06g0306 755010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0306 309 Gene3D Mitochondrial carrier domain 111 309 IPR023395 -
Tan06g0306 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 199 IPR018108 -
Tan06g0306 309 Pfam Mitochondrial carrier protein 109 201 IPR018108 -
Tan06g0306 309 Pfam Mitochondrial carrier protein 11 95 IPR018108 -
Tan06g0306 309 Pfam Mitochondrial carrier protein 210 301 IPR018108 -
Tan06g0306 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 298 IPR018108 -
Tan06g0306 309 PRINTS Mitochondrial carrier protein signature 219 241 IPR002067 GO:0055085(InterPro)
Tan06g0306 309 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085(InterPro)
Tan06g0306 309 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085(InterPro)
Tan06g0306 309 PRINTS Mitochondrial carrier protein signature 172 190 IPR002067 GO:0055085(InterPro)
Tan06g0306 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 92 IPR018108 -
Tan06g0306 309 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 8 299 IPR050567 GO:0006810(PANTHER)|GO:0022857(PANTHER)
Tan06g0306 309 Gene3D Mitochondrial carrier domain 5 110 IPR023395 -
Tan06g0306 309 SUPERFAMILY Mitochondrial carrier 12 293 IPR023395 -
Tan06g0306 309 FunFam Mitochondrial arginine transporter BAC2 11 309 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2657 Tan-Chr4:85947083 Tan06g0306 Tan-Chr6:2379756 1.20E-129 dispersed
Tan06g0306 Tan-Chr6:2379756 Tan08g2161 Tan-Chr8:73440873 3.90E-21 dispersed
Tan06g0305 Tan-Chr6:2379756 Tan06g0306 Tan-Chr6:2379756 6.20E-176 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0306 K15109 - csv:101222165 532.717