Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0330 ATGGAGATCAAAGAAAAGAAGAGAAATTCAAGTATCTCCTCTCCATTAATGTCATCTTCTTTGATGGCTTTCCTCCTGGTTTTCCTCTGTTTCATCTCTTATGGCCCGAACGTGGGCGCTTCCTTCATTCCCAAAGATAATTTTCTCATTGACTGTGGTGCCAATAAGGATCTTGGTGCACTCCCTGATGGAAGAGTGTTCAAATCTGATCAGCAATCCAAGCAGTACCTGGATGCCAAGGATGATATCATAGCGGCCGCCCCACCAGAGACGAACGCACCGTCCCCGGTCGATTTGACGGCGAGAGTCTTCCTCCAAGAAGCTACTTACATTTTTCAGATGGCTGAGCCTGGATGGCATTGGCTGCGCCTCCATTTCCTGCCAATTAAAAGCAACGACTTTGATCTGTTGCAGGCCAAATTTTCAGTAACCACTGAAAAATATGTGTTGCTTCACAGCTTCAACATCAACAATGAATCCACATTTGTTCTCAAGGAGTTTCTGCTTAACATCACTGAACCAAAACTCTCAATCAAGTTCTTCCCAATGAGGAATTCAGCTGCTTACATCAATGCCATCGAGGTCGTCTCCGCTCCGGCGGACTTGATCGCTGACTCCAACATGGAGCTGTCTCCGGTCGGGATGGTCGAGGGCCTCAGCAAATATGCATTTCAGACATTGTATAGGCTAAACATGGGAGGACCTATAATCACTCCAAGAAATGACACTCTTGGAAGGACATGGGATCCAGATGAAGTTTACAGAACACCTTTAGCTGCTGGTAAGAGTGTGGTTGTTGAGACCAACAGCATCAAATACATAGATGGCTTGAAAGAAAAGGGCATGTTAATTGCTCCTCCAATTGTTTATGCAAGTGCAGTTAAAATGGGAGAGGCTAAAGTCAATACACCAAATTTCAATATCACATGGAAATTTGAGGCAGATCCCTCATTTGGCTACCTAATTCGTTTCCATTTCTGTGATATTATCAGCAAAGTTCTCAATACTCTGTATTTCAATGTTTATGTAAATGGGAAGCCTGCCATAACCAACTTGGATTTGTCACACAAGCTAGGAAGTTTGGCAACTGCATACTACAAGGATGTTGTGCTTAATGCTTCCTTGATTGTAGATGGATTGATAATTCAAATTAGTCCGGCGAACGTTGACACGGGCGATGTGAATGCCATTCTAAATGGCTTAGAGGTAATGAAAATAAGCAATTCTGTTAATAGTCTGGATGGAGAGTTTGGAGTGGATGGTAAGTCTGCCAATGGGTCAAACCGGGGCACAGTTGCTGCCGTTGGGTTTGCGATGATGTTCGGAGCGTTTGTCGGGCTTGGGGCCATGGTGATGAAATGGCACAAGAGGCCTCAAGATTGGCAGAAGAGGAACAGTTTCTCTTCCTGGTTGCTTCCTGTGCATGCTGGTGATTCAAGCTTTATGACAAGCAAGACCTCATATGGCTCACACAAGACCAACATTTACTCCTCTACTTTAGGCCTTGGCAGGTTCTTCACTTTGGCAGAGCTGCAAGAAGCCACCAAGAACTTTGATTCCAATTCAATAATTGGTGTTGGTGGGTTTGGAAATGTGTACCTTGGAGTGATTGATGAAGGAACTAAAGTTGCAGTTAAGAGAGGAAATCCGCAATCTGAACAAGGCATAACAGAATTCCAAACAGAAATTCAAATGCTTTCAAAACTCAGACACAGGCATTTGGTTTCTTTGATTGGATACTGTGATGAAAACTCTGAAATGATCTTGGTATATGAGTTCATGTCAAATGGCCCATTCAGAGATCACTTGTATGGAAAGGACTTGCCTCCATTGTCATGGAAGCAAAGGCTAGAGATCTGTATCGGAGCGGCTCGAGGTCTTCATTACCTTCACACAGGAACAGCACAAGGAATCATTCACCGTGATGTCAAAACAACCAACATTTTGCTCGATGAAAACTTCACCGCAAAAGTCGCCGATTTCGGGCTGTCAAAGGATGCTCCAATGGGGCAGGGACATGTTAGTACTGCTGTGAAGGGAAGTTTTGGATATTTGGATCCAGAGTACTTTAGGAGGCAACAGTTGACAGAAAAATCAGATGTTTATTCCTTTGGAGTTGTTTTACTTGAGGCTTTGTGTGTAAGGCCAGCAATCAACCCATCTTTGACAAGGGAACAAGTGAACTTGGCTGATTGGGCAATGCAGAATAAGAGAAAAGGGACTTTGGAAAAGATCATGGATCCTCTTCTAGTTGGAGCCATAAATCCTGAGTCCATGAAGAAGTTTGCAGAAGCAGCAGAGAAGTGTCTTGCTGAACATGGTGTTGATAGGCCAAGCATGGGAGATGTACTGTGGAATTTGGAGTATGCATTACAACTTCAAGAAGCATTCTCACAAGGCAAGGCTGAAGAAGAAAGCAAAGCTGCAGGCACAGCAGCTGTCGCCCCCGCTACTCCTACCGCTGTCGACGCTTCAACAAATGCAGCCGACTCCGACAACCTCCCTGTCGTGCAGCCAGAACAGAATAGGCAACCAGCAGAGGTCCAAACCATTGATGATCACTCAGGAAGTGCAATGTTTGCTCATTTTTCTAATCTCAATGGTAGATGA 2610 44.41 MEIKEKKRNSSISSPLMSSSLMAFLLVFLCFISYGPNVGASFIPKDNFLIDCGANKDLGALPDGRVFKSDQQSKQYLDAKDDIIAAAPPETNAPSPVDLTARVFLQEATYIFQMAEPGWHWLRLHFLPIKSNDFDLLQAKFSVTTEKYVLLHSFNINNESTFVLKEFLLNITEPKLSIKFFPMRNSAAYINAIEVVSAPADLIADSNMELSPVGMVEGLSKYAFQTLYRLNMGGPIITPRNDTLGRTWDPDEVYRTPLAAGKSVVVETNSIKYIDGLKEKGMLIAPPIVYASAVKMGEAKVNTPNFNITWKFEADPSFGYLIRFHFCDIISKVLNTLYFNVYVNGKPAITNLDLSHKLGSLATAYYKDVVLNASLIVDGLIIQISPANVDTGDVNAILNGLEVMKISNSVNSLDGEFGVDGKSANGSNRGTVAAVGFAMMFGAFVGLGAMVMKWHKRPQDWQKRNSFSSWLLPVHAGDSSFMTSKTSYGSHKTNIYSSTLGLGRFFTLAELQEATKNFDSNSIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGKDLPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVADFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCVRPAINPSLTREQVNLADWAMQNKRKGTLEKIMDPLLVGAINPESMKKFAEAAEKCLAEHGVDRPSMGDVLWNLEYALQLQEAFSQGKAEEESKAAGTAAVAPATPTAVDASTNAADSDNLPVVQPEQNRQPAEVQTIDDHSGSAMFAHFSNLNGR 869
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2602063 2604817 + Tan0022326.1 Tan06g0330 755034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0330 869 MobiDBLite consensus disorder prediction 821 844 - -
Tan06g0330 869 Gene3D - 47 200 - -
Tan06g0330 869 Gene3D - 222 408 - -
Tan06g0330 869 FunFam Receptor-like protein kinase FERONIA 223 408 - -
Tan06g0330 869 CDD STKc_IRAK 524 788 - -
Tan06g0330 869 FunFam receptor-like protein kinase FERONIA 482 593 - -
Tan06g0330 869 Gene3D Transferase(Phosphotransferase) domain 1 594 814 - -
Tan06g0330 869 Gene3D Phosphorylase Kinase; domain 1 479 593 - -
Tan06g0330 869 Pfam Protein tyrosine and serine/threonine kinase 522 731 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g0330 869 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g0330 869 ProSiteProfiles Protein kinase domain profile. 518 790 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g0330 869 Pfam Malectin-like domain 50 406 IPR024788 -
Tan06g0330 869 FunFam Receptor-like protein kinase FERONIA 594 808 - -
Tan06g0330 869 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524(InterPro)
Tan06g0330 869 FunFam Putative receptor-like protein kinase 47 199 - -
Tan06g0330 869 SMART serkin_6 518 790 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g0330 869 PANTHER OS07G0166700 PROTEIN 506 795 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Tan06g0330 869 SUPERFAMILY Protein kinase-like (PK-like) 492 788 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0330 Tan-Chr6:2602063 Tan08g0410 Tan-Chr8:3814332 3.80E-162 dispersed
Tan01g0205 Tan-Chr1:1832129 Tan06g0330 Tan-Chr6:2602063 4.40E-176 transposed
Tan01g4444 Tan-Chr1:109800869 Tan06g0330 Tan-Chr6:2602063 8.00E-226 transposed
Tan03g2126 Tan-Chr3:76032288 Tan06g0330 Tan-Chr6:2602063 1.00E-56 transposed
Tan03g2791 Tan-Chr3:80902975 Tan06g0330 Tan-Chr6:2602063 1.50E-168 transposed
Tan04g0002 Tan-Chr4:110126 Tan06g0330 Tan-Chr6:2602063 3.40E-152 transposed
Tan04g0353 Tan-Chr4:2992192 Tan06g0330 Tan-Chr6:2602063 2.10E-170 transposed
Tan04g1108 Tan-Chr4:10102141 Tan06g0330 Tan-Chr6:2602063 5.20E-40 transposed
Tan05g0329 Tan-Chr5:2469201 Tan06g0330 Tan-Chr6:2602063 2.30E-196 transposed
Tan05g0446 Tan-Chr5:3081320 Tan06g0330 Tan-Chr6:2602063 3.20E-54 transposed
Tan05g1580 Tan-Chr5:37014496 Tan06g0330 Tan-Chr6:2602063 2.20E-119 transposed
Tan06g1418 Tan-Chr6:18473021 Tan06g0330 Tan-Chr6:2602063 1.60E-70 transposed
Tan06g1999 Tan-Chr6:64088227 Tan06g0330 Tan-Chr6:2602063 1.00E-57 transposed
Tan09g2091 Tan-Chr9:71283374 Tan06g0330 Tan-Chr6:2602063 1.20E-261 transposed
Tan11g0168 Tan-Chr11:1478072 Tan06g0330 Tan-Chr6:2602063 2.70E-42 transposed
Tan06g0330 Tan-Chr6:2602063 Tan08g0167 Tan-Chr8:1415873 2.40E-63 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67749 PF12819 Malectin_like 9.70E-37 CL0202 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0330 - - - 0.0