Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan06g0344 | ATGAGAAAAGAAGAAAATCACGTCAGGGCTAATATTGGAGAATTCCCTGGTAGAATTACACGTGCTCGGGCTGCTGCATTTAGTGCATCAGCACAACTGCCTCCAAAAGTTCCTGCACATCAACAGGAGAGGCGGGTTGCACGAGCTAATCTGAAAAGAGCTGCTTCAGAAGAAAATAGCTGCCATTCTATTGCTAAATCATCACGACCATATAAGAGGAGGGCAGTGCTTCAGGATGTCAGCAATATATGCTGTGAACCTTCATACTCGAAATGTTTTAATGCAGCTAAAATTCAGGCTGATAGCAGTAACCGTCTCAAGAAATCGAAAGGAGCCTCATCAGTTGGCGTGGCTAACTCCAAGGTTCCTCTTGACCGTAGAACCAAAGGAGCCTCATCAGTTGGTGTGGCTTACTCCAAGGTCCCTCTTGATCTTAGAACGCAAGGCATACAAAAAAATGTCAAATCGAAAGCTAAGTTGAAAGTTGAACATTCAACTAATTCTGAAGACCACGAGACACATCATCGGGTAGGTGGTGGTATAAAGGAAGAGGTCACAAGTGATCTTCGGGATGATAATTGGAGGTCTCAAAGTCCTTCAGAGTCTCAAAATTTTCAAAATAAAGAGAACGTGTTGCTTCTGGGGACAAGAAGCAACCTGGACATTACAGACATTGATTGTAATGACAGAGATGCTCAACTGTGCACCATCTATGCCCATGATATCTACAACAATTTACGTGTTGCTGAGCTAACCAGAAGGCCACGCCCCAATTTCATGGAAACAGTGCAGACTGATATTACCCAAAGCATGCGGGGTATATTGGTTGATTGGCTTGTAGAGGTATCGGAGGAATACAAGTTAGTACCAGACACACTCTACCTAACTGTATTTTTCATTGATTGGTTTCTCTCCCAAAATTACATCGAGAGACAAAAGCTTCAACTGTTGGGTATCACTTGCATGTTAATTGCCTCGAAGTATGAAGAAATTTGTGCCCCACGTGTTGAAGACTTTTGTTTCATCACTGACAGCACCTACACAAAAGAGGAGGTATTGAATATGGAAGGTCAGATATTGAAGCATATGGGCTTTCAACTTTCTGCACCAACTGCAAAATCTTTCCTCAGGAGATATGTTCGAGCTGCACAAACGACTTATAAGACCACTAGTCTTGAACTCGAGTGTCTCGCCAACTATCTAGCCGAACTAACACTGGTTGATTATGGTTTCTTGAATTTTCTTCCCTCGGTTATAGCTGCATCAGCTGTATTTCTTTCCAAATGGACGTTGGATCAGTCGACTCACCCATGGAATTCAACACTGGAATATTATACCTCGTATAAAGCATCGGATCTGAAACAAACTGTTCTTGCTTTACAAGATTTACAGTTGAACACAAATGGTTGTCCTCTCAGTTCGATTCGCGTCAAGTATCGGCAAGAAAAGTTCAAAGCCGTCGCAACTTTGTCTCCTCCGAAATTACTTGATACGCTATTCTGA | 1503 | 42.45 | MRKEENHVRANIGEFPGRITRARAAAFSASAQLPPKVPAHQQERRVARANLKRAASEENSCHSIAKSSRPYKRRAVLQDVSNICCEPSYSKCFNAAKIQADSSNRLKKSKGASSVGVANSKVPLDRRTKGASSVGVAYSKVPLDLRTQGIQKNVKSKAKLKVEHSTNSEDHETHHRVGGGIKEEVTSDLRDDNWRSQSPSESQNFQNKENVLLLGTRSNLDITDIDCNDRDAQLCTIYAHDIYNNLRVAELTRRPRPNFMETVQTDITQSMRGILVDWLVEVSEEYKLVPDTLYLTVFFIDWFLSQNYIERQKLQLLGITCMLIASKYEEICAPRVEDFCFITDSTYTKEEVLNMEGQILKHMGFQLSAPTAKSFLRRYVRAAQTTYKTTSLELECLANYLAELTLVDYGFLNFLPSVIAASAVFLSKWTLDQSTHPWNSTLEYYTSYKASDLKQTVLALQDLQLNTNGCPLSSIRVKYRQEKFKAVATLSPPKLLDTLF | 500 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 2682305 | 2688799 | + | Tan0000748.1 | Tan06g0344 | 755048 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan06g0344 | 500 | MobiDBLite | consensus disorder prediction | 161 | 205 | - | - | |
Tan06g0344 | 500 | Gene3D | - | 241 | 489 | - | - | |
Tan06g0344 | 500 | Pfam | Cyclin, C-terminal domain | 370 | 493 | IPR004367 | - | |
Tan06g0344 | 500 | MobiDBLite | consensus disorder prediction | 161 | 195 | - | - | |
Tan06g0344 | 500 | CDD | CYCLIN_AtCycA-like_rpt2 | 370 | 484 | - | - | |
Tan06g0344 | 500 | FunFam | Cyclin A1 | 357 | 489 | - | - | |
Tan06g0344 | 500 | Coils | Coil | 39 | 59 | - | - | |
Tan06g0344 | 500 | FunFam | Mitotic cyclin 6 | 255 | 355 | - | - | |
Tan06g0344 | 500 | SUPERFAMILY | Cyclin-like | 370 | 495 | IPR036915 | - | |
Tan06g0344 | 500 | SMART | Cyclin_C_2 | 370 | 493 | IPR004367 | - | |
Tan06g0344 | 500 | Gene3D | - | 255 | 368 | - | - | |
Tan06g0344 | 500 | PANTHER | CYCLINS | 223 | 480 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Tan06g0344 | 500 | PIRSF | Cyclin_A_B_D_E | 34 | 499 | IPR046965 | GO:0016538(InterPro)|GO:0044772(InterPro) | |
Tan06g0344 | 500 | Pfam | Cyclin, N-terminal domain | 241 | 368 | IPR006671 | - | |
Tan06g0344 | 500 | SUPERFAMILY | Cyclin-like | 231 | 367 | IPR036915 | - | |
Tan06g0344 | 500 | CDD | CYCLIN_AtCycA_like_rpt1 | 231 | 366 | - | - | |
Tan06g0344 | 500 | SMART | cyclin_7 | 374 | 462 | IPR013763 | - | |
Tan06g0344 | 500 | SMART | cyclin_7 | 277 | 361 | IPR013763 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g2673 | Tan-Chr2:95034803 | Tan06g0344 | Tan-Chr6:2682305 | 7.70E-95 | dispersed | |
Tan06g0344 | Tan-Chr6:2682305 | Tan11g1250 | Tan-Chr11:10640351 | 4.10E-84 | dispersed | |
Tan06g0344 | Tan-Chr6:2682305 | Tan01g3680 | Tan-Chr1:101634757 | 4.20E-113 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan06g0344 | K06627 | - | csv:101222299 | 879.782 |