Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0366 ATGGCGACTGGGAATGAAATTGCCTTTGATTGCTTTATCCTGCTTTTGCTTGTGGTGTTTTCAAACGCCCAATCTGACGTATTGGCACAAGGCAAAGAACTAACTCTTGGGTCTTGGCTAATTTCAGCCACAGGGACTTTTTCCCTCGGGTTTTACAGTCCTAGTCTTTTGAACAACAGTCACATAGCCATTTGGTACAAAGGAGATCCACAGAACCCAGTGTGGATTGCCAATCCAAATTCAGCATTTCCCAGAAATTTTGGGACGCCCTGTCTCACAATCGACAGCAACGGCAGCTTGAAGATTGTCCCTAAAGAAAGAAATGGGCATCCCTATAATTTCTATCTCTTTGAAGCTAAAGAACAGACCAACAGCAGCGCCATTCTTCTAGGCAATGGCAACTTTGTATTGAGTGTGCTGAATCCGGATGGGTCCATTAAGAAACAGCTATGGCAGAGCTTTGATCATCCAACAGACACTCTTCTTCCCGGGATGAAACTTGGGATAAACCACAAAACTGGAACCAATTGGTCTATAACATCCCAAAGAGGTGATTATTCTGTTCTATCAGGATCTTTCACCCTCACAATCAATCCCAACAATACAAACCAGTTGCTGATATTACTTAGAGGAGCCATTTTCTGGACTAGTGGAAACTGGCGGGATGGACGATTTGAATTCTCTGAAGAACTTTCCAACATCAACAATCAAGAATTCGTGTTCAATCGATTTTCAAATGAGAATGAGACCTTTTTCAACTACTCAACCTCCAATTTGAACAATGGATTGGTTGAAGTTCAACCCCGGTTGAGATTGGAAAACGATGGGAAATTGGTGGGGAGTAATTGGGATTTGAAAGTTGAATGTCCTTATTTTGAAAACGAGTTGTTTGAGGCTCCTAAGGATGTTTCTGAAGATGGGTGTGTGGGGAAAAAGCAGCACAAAGTACCCGAGTGCCGAAATCCGCCAAAACAATTTTCGACTACACAGAGATTTGGTAACATGGAGAGAAATGGATTAAGGTATAGAGAAAGTGAGAATCTGACAATTTATGATTGTGAAAAGATTTGCATTTCAAGCTGTGGTTGCATTGGCTTTAGTTCTACGAATGAAGAAGGGACTGGCTGTGAGATATGGAATATGGGAGATACATTTGTTCCAGTGGAGGGAGGCAAGCGAATTATTTGGTCCATTCAGGAGACTGAAGGGAAAGCTATTCGAAAAATAAGGAGGAAAGATTCAGAGAATCAAAATTTTCTACAAGAAATGGGAGCCAAATCTAAAAGTTTTAACATTTTAAAGATGAAGAACGAGCAGAGAAGTGACATAAAGAAATCCGAATTGCAGTTTTACACCTTTGAAAGTGTAGTTTCTGCAACAAACGATTTCGCTGACAATTGTAAGCTCGGAGAAGGTGGTTTTGGGCCAGTTTATAAGGGAAGTTTGGCTGATGGCCAAGAAGTAGCCATTAAAAGACTGTCAAAGAATTCTGGACAAGGACTAGAGGAGTTCAAGAATGAAGCCATGTTGATTGCTAAACTGCAACACACTAATCTGGTTAGGCTTATTGGTTGCTGCATTTATAAAGAAGAGAGGTTATTGGTGTATGAGTACATGCCCAACAAAAGCCTTGACTCCTTCCTCTTTGATCCAGTAAGAAAGCTAATGCTAGATTGGGACAAACGCCTGCACATAATCCAAGGGATAATTCAAGGACTACTCTACCTTCACAACTACTCAAGACTACGAATAGTTCATCGAGATTTAAAAGTTAGCAACATCTTGCTCGATGATGAGATGAATGCAAAAATATCAGATTTTGGCATGGCCAGAATCTTTAAGCCCACAGAGCAAGAAGCAAATACTAGTCACATTGTTGGTACATATGGTTATATATCACCTGAATATGCAATGGGAGGCATTTTCTCAATAAAATCAGATGTTTACAGCTTTGGAGTTTTGTTACTAGAGATCATAACAGCTCAAAAAAACTACAACAATTATGATGTGGGGCGACCTATCAATCTCATGGGATACGCATGGGAATTGTGGGTGAATGACAGAGGAGAAGAACTGATCGATTCGACTTTGTACACCTCCGATCAAAAACCAAAAGCTCTAAGATGCATCCATGTTAGTCTTCTGTGCGTCCAACAAGTACCAGCAGATAGACCTACCATGCTTGATGTTTATTCCATGATTCATAATGATTCTACTCAACTTCCATTGCCAAAACAACCTCCATTTTTCATCACCCAGAACTCCAAATTGGAAGAGGTGACAGATGGCACAGAGCTCAAATCGGAACCAGCAACAGAAAAACATTCTTTGAATAACATGTCGATCTCTGTGATGGTTGCTAGATGA 2367 40.6 MATGNEIAFDCFILLLLVVFSNAQSDVLAQGKELTLGSWLISATGTFSLGFYSPSLLNNSHIAIWYKGDPQNPVWIANPNSAFPRNFGTPCLTIDSNGSLKIVPKERNGHPYNFYLFEAKEQTNSSAILLGNGNFVLSVLNPDGSIKKQLWQSFDHPTDTLLPGMKLGINHKTGTNWSITSQRGDYSVLSGSFTLTINPNNTNQLLILLRGAIFWTSGNWRDGRFEFSEELSNINNQEFVFNRFSNENETFFNYSTSNLNNGLVEVQPRLRLENDGKLVGSNWDLKVECPYFENELFEAPKDVSEDGCVGKKQHKVPECRNPPKQFSTTQRFGNMERNGLRYRESENLTIYDCEKICISSCGCIGFSSTNEEGTGCEIWNMGDTFVPVEGGKRIIWSIQETEGKAIRKIRRKDSENQNFLQEMGAKSKSFNILKMKNEQRSDIKKSELQFYTFESVVSATNDFADNCKLGEGGFGPVYKGSLADGQEVAIKRLSKNSGQGLEEFKNEAMLIAKLQHTNLVRLIGCCIYKEERLLVYEYMPNKSLDSFLFDPVRKLMLDWDKRLHIIQGIIQGLLYLHNYSRLRIVHRDLKVSNILLDDEMNAKISDFGMARIFKPTEQEANTSHIVGTYGYISPEYAMGGIFSIKSDVYSFGVLLLEIITAQKNYNNYDVGRPINLMGYAWELWVNDRGEELIDSTLYTSDQKPKALRCIHVSLLCVQQVPADRPTMLDVYSMIHNDSTQLPLPKQPPFFITQNSKLEEVTDGTELKSEPATEKHSLNNMSISVMVAR 788
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2905665 2909027 - Tan0010396.1 Tan06g0366 755070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0366 788 SMART serkin_6 463 734 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g0366 788 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Tan06g0366 788 Gene3D Phosphorylase Kinase; domain 1 436 538 - -
Tan06g0366 788 Pfam Protein tyrosine and serine/threonine kinase 467 681 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g0366 788 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 428 538 - -
Tan06g0366 788 SUPERFAMILY Protein kinase-like (PK-like) 447 755 IPR011009 -
Tan06g0366 788 ProSiteProfiles Bulb-type lectin domain profile. 25 150 IPR001480 -
Tan06g0366 788 CDD STKc_IRAK 469 734 - -
Tan06g0366 788 PIRSF SRK 5 288 IPR024171 GO:0004674(InterPro)
Tan06g0366 788 PIRSF SRK 286 435 IPR024171 GO:0004674(InterPro)
Tan06g0366 788 PIRSF SRK 394 788 IPR024171 GO:0004674(InterPro)
Tan06g0366 788 SMART blect_4 31 157 IPR001480 -
Tan06g0366 788 Gene3D Transferase(Phosphotransferase) domain 1 539 742 - -
Tan06g0366 788 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 539 742 - -
Tan06g0366 788 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 144 750 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Tan06g0366 788 Pfam D-mannose binding lectin 74 183 IPR001480 -
Tan06g0366 788 Pfam PAN-like domain 346 380 IPR003609 -
Tan06g0366 788 ProSiteProfiles Protein kinase domain profile. 463 750 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g0366 788 Gene3D - 18 155 IPR036426 -
Tan06g0366 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 584 596 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0310 Tan-Chr6:2415931 Tan06g0366 Tan-Chr6:2905665 5.50E-199 dispersed
Tan06g0311 Tan-Chr6:2415931 Tan06g0366 Tan-Chr6:2905665 5.40E-158 dispersed
Tan06g0366 Tan-Chr6:2905665 Tan11g2173 Tan-Chr11:56792933 1.50E-120 dispersed
Tan06g0366 Tan-Chr6:2905665 Tan01g4474 Tan-Chr1:110203536 2.00E-130 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67750 PF07714 PK_Tyr_Ser-Thr 5.50E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0366 - - - 0.0