Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0389 ATGTATGGGAGAAAAGCATGCCAATTGGTGAAAGAGCTAGCAAGCGCCGAGAAAGGACAACTAACACACTTCAATAGCGACCTATTTGAACAGGTCATTTCAGAATGCCAGCAGCATCATCTTGAGCTTCAATCCTTGTTGAGGAAAATACAGGAAGAAGGATTGGATCTACAGACGACTAAGAATGAAGATCATTTTGGCGCGCTCGTTCACCACCTCGCATTAGTTCGCAATAAACGCTGCCTCATGGCTTATGTGTACAATCGAGCTGAGATTATAAGAAGTTTGATATGGAAGATATTAGGACCGCTTCCACCAGGAATACAAGAGAAGCTCAGCAACTCAGAGCAAGAGTACTTTAAGAAGCATTCTGCACGTCTAAAAGAATACATGTCGAAACTCGAGTTGGATTTGACTGTGGATATGGTGCCACCTAAGGATCCATATATCCAAGTAAGAGTACTCGACGACATCGGTGAAGGAATCGTACTGAGTGATGATAAAACAGCAAACTTTGCACGGTTCTCCATACATTTTCTTAAACGAACAGATGCTGAGCAATACATCTCACGGGGTTTAATGGAGGAACTTAGAGACTGA 600 42.67 MYGRKACQLVKELASAEKGQLTHFNSDLFEQVISECQQHHLELQSLLRKIQEEGLDLQTTKNEDHFGALVHHLALVRNKRCLMAYVYNRAEIIRSLIWKILGPLPPGIQEKLSNSEQEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFARFSIHFLKRTDAEQYISRGLMEELRD 199
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2956971 2960901 - Tan0017566.1 Tan06g0389 755093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0389 199 CDD GINS_B_Psf1 148 197 - -
Tan06g0389 199 CDD GINS_A_psf1 3 136 IPR005339 GO:0000811(InterPro)|GO:0006260(InterPro)
Tan06g0389 199 PANTHER PARTNER OF SLD5 1 197 IPR005339 GO:0000811(InterPro)|GO:0000811(PANTHER)|GO:0006260(InterPro)|GO:1902983(PANTHER)
Tan06g0389 199 Pfam GINS complex protein helical bundle domain 46 134 IPR021151 -
Tan06g0389 199 Gene3D - 1 134 - -
Tan06g0389 199 Coils Coil 43 63 - -
Tan06g0389 199 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0389 Tan-Chr6:2956971 Tan06g0390 Tan-Chr6:2956971 1.60E-111 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0389 K10732 - csv:101205409 369.392