Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0405 ATGGAAGGTATTTCGCTTCACGGAACGCTTCACGCCACAATTTATGAAGTCGACAATTTGCATCATGGTGGTGGATCCAATGTCTTCAGCAAGTTAATGCAAAACTTTGAGGAGGCTGTTGGAATTGGAAAAGGAGTTACCAAACTATATGCGACTATAGATTTAGAAAAGGCTAGAGTTGGTAGGACACGAATTTTGGAAACTGAACCCAATAACCCCAGATGGTATGAATCTTTCCACATCTATTGTGCCCATAGGGCATCAAATGTTATCTTCACTGTGAAGGATGATAATCCCATTGGTGCAAGTTTGATTGGACGTGCATACGTACCTGTGGAAGACCTCATAGATGGGGAGGAAGTTGACAGGTGGGTTCCAATCTTAGATGAAGAAAAAAATCCAGTTGAAGGAGAATCTAAGATTCACGTCAAGCTTCAATACTTCAGTGTTACTAAAGATCGCAATTGGGGTCGTGGTATAAGAAGCCGCAAATTTCCTGGAGTCCCCTACACATATTACTCACAGAGACAAGGTTGTAGGGTCTCTTTGTATCAAGATGCTCATATCCCTGATAATTTTATTCCTAAAATACCTCTTGCTGGAGGAAAGAATTATGCTCCCGCCAGATGTTGGGAAGATATTTTTGATGCCATACACAATGCAAAACACATGATCTACATCACAGGATGGTCTGTTTATACAGAAATTGCCTTGATAAGGGACTCGAGGAGACCAAAGCCCGGAGGAGACACCATGCTTGGTGAGCTTCTTAAGAAGAAAGCAAGTGAAGGCGTCAGAGTTCTTATGCTTGTCTGGGATGACAGAACATCAGTCGGTTTACTTAAAAAAGATGGTCTGATGGCTACTCATGATGAAGAAACTGAACTTTACTTTCGAGATACTGATGTGCAGTGTGTCTTGTGCCCTCGTAATCCTGACGATGGTGGAAGTATTGTTCAAGATCTACAAATCTCTACCATGTTCACTCATCATCAGAAGATTGTTGTGGTGGATAGCCCAATGCCAAGTGGAGAGTCGGACAAGAGGAGAATTGTGAGTTTCGTTGGTGGCCTTGATCTCTGTGATGGCAGGTATGACACACCCTTCCATTCCCTTTTCAGGACATTGGATACTGCACATCACGACGATTTCCATCAACCAAATTTTCCTGGTGCATTAATAACAAAAGGTGGACCAAGGGAACCTTGGCACGACATCCATTCCCGGCTTGAAGGGCCCATTGCGTGGGATGTCTTATTCAATTTTGAGCAAAGGTGGAAGAAACAAGGTGGGAAGGATGTACTTGTGCAGCTTCGGGAGCTTGATGAAATAATTATTCCTCCATCTCCTGTTATGTACCCTGATGACCATGAAACCTGGAATGTTCAATTGTTTAGATCTATAGACGGTGGGGCAGCTTTTGGCTTTCCCGAGACCCCCGAAGATGCTGCTAGAGCTGGACTAGTCAGTGGGAAGGATAACATTATTGATCGAAGCATTCAAGACGCTTACATTAATGCTATTCGGCGGGCTAAGGATTTTATTTATATTGAAAACCAATATTTCCTTGGGAGTTGTTTTGGATGGTCTCCTGATGATATCAAGCCTGAGGATATTGGTGCCTTGCACTGTATCCCAAGAGAGCTTTCCCTTAAGATCGTAAGTAAGATTGCAGCAGGGGAAAGGTTCACTGTCTATGTAGTTGTCCCAATGTGGCCAGAAGGAATACCAGAAAGCGGATCGGTTCAGGCAATATTAGATTGGCAGAGGAGGACATTTGAAATGATGTATAAAGACGTGATTCAGGCTCTTAGAGATCAAGGTATCGAGGAAGACCCTCGTAACTACTTGACATTCTTCTGTCTTGGCAACCGGGAAGTCAAGAGGTCTGGAGAATATCAACCTCCAGAATCACCGGATGAAGATTCTGATTATTTGAAAGCCCAGCAGGCCAGGCGTTTCATGATTTATGTTCACACCAAGATGATGATCGTTGATGATGAGTACATAATTGTCGGATCGGCCAATATCAACCAGAGATCCATGGATGGTGCAAGGGACTCTGAAATAGCAATGGGCGCTTATCAGCCATATCATCTGTCAACCCATGAACCTGCACGTGGTCAAGTTCACGGATTCCGTATGGCCCTATGGTATGAACATCTTGGTATGCTTGACGAATGTTTCCTTCGGCCAGAAAGCGAAGAATGTGTCTCAAAGGTTAACAGAATTGCTGATAAATATTGGGATCTGTATTCAAGTGAAACACTTGAGAGAGACTTGCCCGGTCACCTCCTCCGCTATCCTGTCGGCATAAGCAGTGAAGGAGATGTCACAGAGCTCCCAGGATTTGAGTTCTTCCCCGACACCAAAGCTCGTATACTCGGAACCAAATCTGACTACCTCCCTCCCATCCTCACTACTTAG 2427 44.05 MEGISLHGTLHATIYEVDNLHHGGGSNVFSKLMQNFEEAVGIGKGVTKLYATIDLEKARVGRTRILETEPNNPRWYESFHIYCAHRASNVIFTVKDDNPIGASLIGRAYVPVEDLIDGEEVDRWVPILDEEKNPVEGESKIHVKLQYFSVTKDRNWGRGIRSRKFPGVPYTYYSQRQGCRVSLYQDAHIPDNFIPKIPLAGGKNYAPARCWEDIFDAIHNAKHMIYITGWSVYTEIALIRDSRRPKPGGDTMLGELLKKKASEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETELYFRDTDVQCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSPMPSGESDKRRIVSFVGGLDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGALITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWKKQGGKDVLVQLRELDEIIIPPSPVMYPDDHETWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYINAIRRAKDFIYIENQYFLGSCFGWSPDDIKPEDIGALHCIPRELSLKIVSKIAAGERFTVYVVVPMWPEGIPESGSVQAILDWQRRTFEMMYKDVIQALRDQGIEEDPRNYLTFFCLGNREVKRSGEYQPPESPDEDSDYLKAQQARRFMIYVHTKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLSTHEPARGQVHGFRMALWYEHLGMLDECFLRPESEECVSKVNRIADKYWDLYSSETLERDLPGHLLRYPVGISSEGDVTELPGFEFFPDTKARILGTKSDYLPPILTT 808
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3041041 3045970 + Tan0006188.1 Tan06g0405 755109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0405 808 SMART pld_4 326 364 IPR001736 GO:0003824(InterPro)
Tan06g0405 808 SMART pld_4 654 681 IPR001736 GO:0003824(InterPro)
Tan06g0405 808 CDD C2_plant_PLD 6 148 - -
Tan06g0405 808 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 149 IPR035892 -
Tan06g0405 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 326 364 IPR001736 GO:0003824(InterPro)
Tan06g0405 808 Pfam Phospholipase D Active site motif 656 681 IPR001736 GO:0003824(InterPro)
Tan06g0405 808 Pfam Phospholipase D Active site motif 327 364 IPR001736 GO:0003824(InterPro)
Tan06g0405 808 Pfam C2 domain 44 126 IPR000008 -
Tan06g0405 808 SUPERFAMILY Phospholipase D/nuclease 443 738 - -
Tan06g0405 808 Pfam Phospholipase D C terminal 726 798 IPR024632 -
Tan06g0405 808 CDD PLDc_pPLDalpha_2 492 701 - -
Tan06g0405 808 ProSiteProfiles C2 domain profile. 1 125 IPR000008 -
Tan06g0405 808 Gene3D Endonuclease Chain A 480 699 - -
Tan06g0405 808 Gene3D Endonuclease Chain A 200 442 - -
Tan06g0405 808 FunFam Phospholipase D 467 700 - -
Tan06g0405 808 SUPERFAMILY Phospholipase D/nuclease 151 441 - -
Tan06g0405 808 PIRSF PLD_plant 1 808 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Tan06g0405 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 654 681 IPR001736 GO:0003824(InterPro)
Tan06g0405 808 PANTHER PHOSPHOLIPASE D 11 795 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Tan06g0405 808 SMART C2_3c 9 124 IPR000008 -
Tan06g0405 808 FunFam Phospholipase D delta 201 444 - -
Tan06g0405 808 Gene3D C2 domain 6 157 IPR035892 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2720 Tan-Chr2:95496371 Tan06g0405 Tan-Chr6:3041041 0.00E+00 dispersed
Tan06g0405 Tan-Chr6:3041041 Tan06g0407 Tan-Chr6:3041041 0.00E+00 dispersed
Tan06g0405 Tan-Chr6:3041041 Tan06g0406 Tan-Chr6:3041041 0.00E+00 tandem
Tan01g1948 Tan-Chr1:21422153 Tan06g0405 Tan-Chr6:3041041 6.10E-197 transposed
Tan04g2749 Tan-Chr4:86925706 Tan06g0405 Tan-Chr6:3041041 3.50E-172 transposed
Tan04g2586 Tan-Chr4:85111037 Tan06g0405 Tan-Chr6:3041041 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0405 K01115 - csv:101206113 1576.22