Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0407 ATGTCGCACTTGTTTACCCAACTTTTGCTTTTCTGTCATTCAATTGGCTTACTGGAGAAACATTTATTGCAGTTAATGCAAAACTTTGAGGAGGCTGTTGGAATTGGAAAAGGAGTTACCAAACTATATGCGACTATAGATTTAGAAAAGGCTAGAGTTGGTAGGACACGAATTTTGGAAACTGAACCCAATAACCCCAGATGGTATGAATCTTTCCACATCTATTGTGCCCATAGGGCATCAAATGTTATCTTCACTGTGAAGGATGATAATCCCATTGGTGCAAGTTTGATTGGACGTGCATACGTACCTGTGGAAGACCTCATAGATGGGGAGGAAGTTGACAGGTGGGTTCCAATCTTAGATGAAGAAAAAAATCCAGTTGAAGGAGAATCTAAGATTCACGTCAAGCTTCAATACTTCAGTGTTACTAAAGATCGCAATTGGGGTCGTGGTATAAGAAGCCGCAAATTTCCTGGAGTCCCCTACACATATTACTCACAGAGACAAGGTTGTAGGGTCTCTTTGTATCAAGATGCTCATATCCCTGATAATTTTATTCCTAAAATACCTCTTGCTGGAGGAAAGAATTATGCTCCCGCCAGATGTTGGGAAGATATTTTTGATGCCATACACAATGCAAAACACATGATCTACATCACAGGATGGTCTGTTTATACAGAAATTGCCTTGATAAGGGACTCGAGGAGACCAAAGCCCGGAGGAGACACCATGCTTGGTGAGCTTCTTAAGAAGAAAGCAAGTGAAGGCGTCAGAGTTCTTATGCTTGTCTGGGATGACAGAACATCAGTCGGTTTACTTAAAAAAGATGGTCTGATGGCTACTCATGATGAAGAAACTGAACTTTACTTTCGAGATACTGATGTGCAGTGTGTCTTGTGCCCTCGTAATCCTGACGATGGTGGAAGTATTGTTCAAGATCTACAAATCTCTACCATGTTCACTCATCATCAGAAGATTGTTGTGGTGGATAGCCCAATGCCAAGTGGAGAGTCGGACAAGAGGAGAATTGTGAGTTTCGTTGGTGGCCTTGATCTCTGTGATGGCAGGTATGACACACCCTTCCATTCCCTTTTCAGGACATTGGATACTGCACATCACGACGATTTCCATCAACCAAATTTTCCTGGTGCATTAATAACAAAAGGTGGACCAAGGGAACCTTGGCACGACATCCATTCCCGGCTTGAAGGGCCCATTGCGTGGGATGTCTTATTCAATTTTGAGCAAAGGTGGAAGAAACAAGGTGGGAAGGATGTACTTGTGCAGCTTCGGGAGCTTGATGAAATAATTATTCCTCCATCTCCTGTTATGTACCCTGATGACCATGAAACCTGGAATGTTCAATTGTTTAGATCTATAGACGGTGGGGCAGCTTTTGGCTTTCCCGAGACCCCCGAAGATGCTGCTAGAGCTGGACTAGTCAGTGGGAAGGATAACATTATTGATCGAAGCATTCAAGACGCTTACATTAATGCTATTCGGCGGGCTAAGGATTTTATTTATATTGAAAACCAATATTTCCTTGGGAGTTGTTTTGGATGGTCTCCTGATGATATCAAGCCTGAGGATATTGGTGCCTTGCACTGTATCCCAAGAGAGCTTTCCCTTAAGATCGTAAGTAAGATTGCAGCAGGGGAAAGGTTCACTGTCTATGTAGTTGTCCCAATGTGGCCAGAAGGAATACCAGAAAGCGGATCGGTTCAGGCAATATTAGATTGGCAGAGGAGGACATTTGAAATGATGTATAAAGACGTGATTCAGGCTCTTAGAGATCAAGGTATCGAGGAAGACCCTCGTAACTACTTGACATTCTTCTGTCTTGGCAACCGGGAAGTCAAGAGGTCTGGAGAATATCAACCTCCAGAATCACCGGATGAAGATTCTGATTATTTGAAAGCCCAGCAGGCCAGGCGTTTCATGATTTATGTTCACACCAAGATGATGATCGTTGATGATGAGTACATAATTGTCGGATCGGCCAATATCAACCAGAGATCCATGGATGGTGCAAGGGACTCTGAAATAGCAATGGGCGCTTATCAGCCATATCATCTGTCAACCCATGAACCTGCACGTGGTCAAGTTCACGGATTCCGTATGGCCCTATGGTATGAACATCTTGGTATGCTTGACGAATGTTTCCTTCGGCCAGAAAGCGAAGAATGTGTCTCAAAGGTTAACAGAATTGCTGATAAATATTGGGATCTGTATTCAAGTGAAACACTTGAGAGAGACTTGCCCGGTCACCTCCTCCGCTATCCTGTCGGCATAAGCAGTGAAGGAGATGTCACAGAGCTCCCAGGATTTGAGTTCTTCCCCGACACCAAAGCTCGTATACTCGGAACCAAATCTGACTACCTCCCTCCCATCCTCACTACTTAG 2406 43.81 MSHLFTQLLLFCHSIGLLEKHLLQLMQNFEEAVGIGKGVTKLYATIDLEKARVGRTRILETEPNNPRWYESFHIYCAHRASNVIFTVKDDNPIGASLIGRAYVPVEDLIDGEEVDRWVPILDEEKNPVEGESKIHVKLQYFSVTKDRNWGRGIRSRKFPGVPYTYYSQRQGCRVSLYQDAHIPDNFIPKIPLAGGKNYAPARCWEDIFDAIHNAKHMIYITGWSVYTEIALIRDSRRPKPGGDTMLGELLKKKASEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETELYFRDTDVQCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSPMPSGESDKRRIVSFVGGLDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGALITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWKKQGGKDVLVQLRELDEIIIPPSPVMYPDDHETWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYINAIRRAKDFIYIENQYFLGSCFGWSPDDIKPEDIGALHCIPRELSLKIVSKIAAGERFTVYVVVPMWPEGIPESGSVQAILDWQRRTFEMMYKDVIQALRDQGIEEDPRNYLTFFCLGNREVKRSGEYQPPESPDEDSDYLKAQQARRFMIYVHTKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLSTHEPARGQVHGFRMALWYEHLGMLDECFLRPESEECVSKVNRIADKYWDLYSSETLERDLPGHLLRYPVGISSEGDVTELPGFEFFPDTKARILGTKSDYLPPILTT 801
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3041041 3045970 + Tan0006188.3 Tan06g0407 755111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0407 801 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 319 357 IPR001736 GO:0003824(InterPro)
Tan06g0407 801 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 647 674 IPR001736 GO:0003824(InterPro)
Tan06g0407 801 FunFam Phospholipase D 460 693 - -
Tan06g0407 801 SMART C2_3c 24 117 IPR000008 -
Tan06g0407 801 ProSiteProfiles C2 domain profile. 1 118 IPR000008 -
Tan06g0407 801 Pfam Phospholipase D C terminal 719 791 IPR024632 -
Tan06g0407 801 Pfam C2 domain 37 119 IPR000008 -
Tan06g0407 801 Gene3D C2 domain 21 150 IPR035892 -
Tan06g0407 801 SMART pld_4 647 674 IPR001736 GO:0003824(InterPro)
Tan06g0407 801 SMART pld_4 319 357 IPR001736 GO:0003824(InterPro)
Tan06g0407 801 Gene3D Endonuclease Chain A 473 692 - -
Tan06g0407 801 SUPERFAMILY Phospholipase D/nuclease 436 731 - -
Tan06g0407 801 FunFam Phospholipase D delta 194 437 - -
Tan06g0407 801 Gene3D Endonuclease Chain A 193 435 - -
Tan06g0407 801 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 35 142 IPR035892 -
Tan06g0407 801 CDD PLDc_pPLDalpha_2 485 694 - -
Tan06g0407 801 Pfam Phospholipase D Active site motif 320 357 IPR001736 GO:0003824(InterPro)
Tan06g0407 801 Pfam Phospholipase D Active site motif 649 674 IPR001736 GO:0003824(InterPro)
Tan06g0407 801 PIRSF PLD_plant 10 801 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Tan06g0407 801 SUPERFAMILY Phospholipase D/nuclease 144 434 - -
Tan06g0407 801 CDD C2_plant_PLD 32 141 - -
Tan06g0407 801 PANTHER PHOSPHOLIPASE D 12 788 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0405 Tan-Chr6:3041041 Tan06g0407 Tan-Chr6:3041041 0.00E+00 dispersed
Tan06g0407 Tan-Chr6:3041041 Tan06g2132 Tan-Chr6:70585955 1.40E-203 dispersed
Tan06g0406 Tan-Chr6:3041041 Tan06g0407 Tan-Chr6:3041041 0.00E+00 tandem
Tan06g0407 Tan-Chr6:3041041 Tan06g0408 Tan-Chr6:3041041 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0407 K01115 - csv:101206113 1524.99