Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0459 ATGAATCTTCTTGGTATTTTACTCCCCATGTGGGTTTTCTATTCCTTGTTCCCAATAATTGATGCCAGACCAGAGCTTGCTGGGTTTTCAATTTCTAGGACTGTTTTTGCTTCTCAGAGAGAATCCATTTCTCACATTGTGGCCAAAATGGAAGCTCAATCCCCAGGAGTTGCAGAGGTTAGAGTAGTTCATCACCAAGATTTGAACAAGAGAATTCTTATAGCATTGATTGTTTCTTCCACACTTCTTGGAGCTATATTGTTGTTCCTTTTGTGTTTTTGGATATATCGTCGAAAAGCGTCAAAGCTTGATGATGGAGAATGTCAAAAGAATTTGGAGGCTTCGAAAGGGATGACGATAAATCCCATCATATCCAGATTTAACTCCTTGAGGTTGGCTAATTTTAAAGGTTCAGTTTCCACGATTGATTATAAACTGTTGGAAGCAGCAACTGATAACTTCAGCAAAAGCAATGTTTTGGGCGAAGGCGGTACGGCGCATGTTTACAAAGCTCGATTCAATGATAAAATGCTGGCAGCTGTGAAGAGAATAGACTATGGAGGACCGGATGCCGAAAGAGAATTTGAGAATGAGGTGAACTGGCTGTGTAAAATACGACATCAAAATGTTATCAAACTCTTGGGGCACTGCATTCATGGCGAAACACGGTTTCTTGTTTACGAGATGATGCAGAATGGATCTTTGGAGTCTCAATTGCATGGACCTTCTCATGGATCGGCTTTAACTTGGCATCTCCGAATGAAGATCGCTGTCGATGTTGCAAGAGGATTGGAGTATCTTCACGAGCACCGAAGTCCTCCTGTCGTTCATCGGGATTTGAAATCGTCGAATATCCTTCTAGATTCAGACTTCAATGCCAAGCTCTCTGACTTTGGCCTTACTGTAAACTTGGGAGCTCAAAATAAACACATAAAGCTCTCCGGAACTTTGGGATATGTCGCTCCGGAGTATCTTTTAGACGGTAAACTAACAGATAAAAGCGATGTCTACGCTTTCGGAGTTGTTCTTTTGGAGCTTCTGACCGGGAAAGAGCCCGTCGAGAAGATGGGACCTACTCAATCCCAATCTCTAGTTTCATGGGCAATCCCACAGCTTAGCGACAGATCGAAGCTACCGAAAGTTGTCGATCCCGTGATAAGGGACACGATGGACTTGAAGCACTTATACCAAGTTGCTGCTGTAGCTGTGTTATGTGTACAATCCGAACCGAGCTATCGACCGTTGGTTACCGATGTTCTGCATTCCCTCATCCCTCTTGTACCTGTAGAGCTTGGAGGATCACTAAGAATTACAGAACCACTGCTTCCGAAGGTGCCTTCATCGACCCGCTAA 1353 43.61 MNLLGILLPMWVFYSLFPIIDARPELAGFSISRTVFASQRESISHIVAKMEAQSPGVAEVRVVHHQDLNKRILIALIVSSTLLGAILLFLLCFWIYRRKASKLDDGECQKNLEASKGMTINPIISRFNSLRLANFKGSVSTIDYKLLEAATDNFSKSNVLGEGGTAHVYKARFNDKMLAAVKRIDYGGPDAEREFENEVNWLCKIRHQNVIKLLGHCIHGETRFLVYEMMQNGSLESQLHGPSHGSALTWHLRMKIAVDVARGLEYLHEHRSPPVVHRDLKSSNILLDSDFNAKLSDFGLTVNLGAQNKHIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLTGKEPVEKMGPTQSQSLVSWAIPQLSDRSKLPKVVDPVIRDTMDLKHLYQVAAVAVLCVQSEPSYRPLVTDVLHSLIPLVPVELGGSLRITEPLLPKVPSSTR 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3328473 3331491 + Tan0001402.1 Tan06g0459 755163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0459 450 ProSitePatterns Protein kinases ATP-binding region signature. 160 182 IPR017441 GO:0005524(InterPro)
Tan06g0459 450 PANTHER OS01G0750732 PROTEIN 54 427 IPR050885 -
Tan06g0459 450 SUPERFAMILY Protein kinase-like (PK-like) 131 423 IPR011009 -
Tan06g0459 450 SMART serkin_6 154 424 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g0459 450 FunFam probable receptor-like protein kinase At1g80640 230 428 - -
Tan06g0459 450 Pfam Protein tyrosine and serine/threonine kinase 157 382 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g0459 450 Gene3D Phosphorylase Kinase; domain 1 118 229 - -
Tan06g0459 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g0459 450 ProSiteProfiles Protein kinase domain profile. 154 424 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g0459 450 Gene3D Transferase(Phosphotransferase) domain 1 230 428 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0459 Tan-Chr6:3328473 Tan09g0259 Tan-Chr9:22595957 5.50E-72 dispersed
Tan06g0459 Tan-Chr6:3328473 Tan06g0460 Tan-Chr6:3328473 6.60E-211 tandem
Tan01g3592 Tan-Chr1:100957228 Tan06g0459 Tan-Chr6:3328473 1.00E-124 wgd
Tan02g2747 Tan-Chr2:95739734 Tan06g0459 Tan-Chr6:3328473 2.60E-133 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67751 PF07714 PK_Tyr_Ser-Thr 2.40E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0459 - - - 0.0