Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0468 ATGCCAGTCGACGGTTCGTCACCTTCCTCCCCCACCGTCTGCGTCACCGGCGCCGGCGGCTTCATTGCCTCTTGGATCGTCAAACTCCTCCTCCAGAAAGGCTATACAGTAAGAGGAACCGTCAGAAATCCAGACGATCCGAAGAACGTCCATTTGAGAGAGCTCGAAGGAGCGGCGGAACGGCTCAGTTTGCATAAAGCCGATCTTCTCGATTTCGAAAGCCTTAGAGCGGCGATCAATGGCTGCGATGGCGTCTTCCACACGGCGTCGCCTGTTACTGACGATCCGGAGCAAATGGTGGAACCGGCTGTCAACGGCACGAAGAACGTCATAATCGCAGCGGCGGAAGCCAAAGTCCGTCGCGTCGTGTTCACTTCGTCGATTGGTGCAGTCTACATGGACCCCAACCGTGGTCCAGATGAGGTCGTGGACGAGTCTTGTTGGAGCGATCTCGAATTCTGCAAGAACACGAAGAATTGGTACTGCTATGGGAAAGCTGTAGCAGAGCAGGCGGCATGGGAGGTTGCGAAGGAGAAGGGAGTGGATTTGGTGGTGGTGAATCCGGTGCTGGTGTTAGGGCCATTGTTGCAGTCCACCATTAACGCGAGCATAATTCATATTCTGAAGTACTTGACTGGATCGGCGAAGACGTACGCCAATTCGGTTCAGGCGTATGTGGACGTGAAGGATGTGGCTATAGCACATATTCTCGTGTACGAGACTCCCTCCGCCGCCGGCCGGTACCTCTGTGCCGAGAGTGTGCTCCACAGAGCAGAAGTTGTTGAGATTCTGGCCAAATTATTCCCGGAATATCCTATTCCCACCAAGTGCTCAGATGGAGTGAACCCAAGGAAGAAGGCATACAAATTCTCCAACCAGAAGCTCAAGGATTTGGGATTGGAGTTCACTCCAGTGAAGCAGTGTCTATACGACACCGTTAAGAGCCTGCAAGAGAAAGGTCATCTCCCAATCCCCATCACTACTCAACCAGCAGATTCCATTCGAATTCAATCTTAA 1017 52.8 MPVDGSSPSSPTVCVTGAGGFIASWIVKLLLQKGYTVRGTVRNPDDPKNVHLRELEGAAERLSLHKADLLDFESLRAAINGCDGVFHTASPVTDDPEQMVEPAVNGTKNVIIAAAEAKVRRVVFTSSIGAVYMDPNRGPDEVVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKGVDLVVVNPVLVLGPLLQSTINASIIHILKYLTGSAKTYANSVQAYVDVKDVAIAHILVYETPSAAGRYLCAESVLHRAEVVEILAKLFPEYPIPTKCSDGVNPRKKAYKFSNQKLKDLGLEFTPVKQCLYDTVKSLQEKGHLPIPITTQPADSIRIQS 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3411935 3417029 + Tan0020606.1 Tan06g0468 755172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0468 338 CDD FR_SDR_e 13 300 - -
Tan06g0468 338 FunFam Cinnamoyl-CoA reductase 1 4 335 - -
Tan06g0468 338 Gene3D - 4 337 - -
Tan06g0468 338 Pfam NAD dependent epimerase/dehydratase family 13 245 IPR001509 -
Tan06g0468 338 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 317 IPR036291 -
Tan06g0468 338 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 315 IPR050425 GO:0016616(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g5170 Tan-Chr1:116765397 Tan06g0468 Tan-Chr6:3411935 7.30E-79 dispersed
Tan01g5171 Tan-Chr1:116765397 Tan06g0468 Tan-Chr6:3411935 3.00E-59 dispersed
Tan04g2511 Tan-Chr4:84064371 Tan06g0468 Tan-Chr6:3411935 4.80E-150 dispersed
Tan04g2512 Tan-Chr4:84076667 Tan06g0468 Tan-Chr6:3411935 1.40E-144 dispersed
Tan06g0468 Tan-Chr6:3411935 Tan08g2390 Tan-Chr8:75228979 1.00E-75 dispersed
Tan01g1490 Tan-Chr1:15138572 Tan06g0468 Tan-Chr6:3411935 5.60E-66 transposed
Tan04g0859 Tan-Chr4:7377453 Tan06g0468 Tan-Chr6:3411935 3.40E-60 transposed
Tan07g0758 Tan-Chr7:12217134 Tan06g0468 Tan-Chr6:3411935 1.00E-83 transposed
Tan04g2509 Tan-Chr4:84039037 Tan06g0468 Tan-Chr6:3411935 8.70E-152 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0468 K09753 - csv:101213412 611.683