Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan06g0477 | ATGGGGATATATCTGAGCTCCCCCAAAACAGAAAAGGCCTCGGATGATGGTGACAACGAAAGACTTCGGTACGGCCTATCCTCTATGCAAGGGTGGCGTGCAACCATGGAAGATGCTCATGCAGCCTGTCTAGATTTGGACACTTCAACGTCTTTCTTTGGCGTTTATGATGGCCATGGAGGTAAAGCAGTTTCTAAGTTCTGTGCCAAGTATCTTCACCGACAGGTGCTCAAGCATGAGTCATACATGGCTGGAGATTTGGGAACTTCATTACAGAAGGCCTTTCTCAGAATGGATGAGATGATGCGTGGGCAAAGAGGATGGAGAGAATTAGCTATTTTGGGAGACAAAATGGACAAGATTTCTGGTATGATAGAAGGATTTATATGGTCACCCAAGAGTAGCGAAGCTAACAACCAACTGGACGATTGGCCTCCGGAGGAGGGACCTCACTCTGACTTTCATGGACCAAATGCTGGAAGCACAGCTTGTGTTGCAATCATACGAAATAACCAACTTGTGGTGGCAAATGCTGGTGATTCTCGCTGTGTCATTTCCAGAAAGGGCCAGGCATATAATCTATCTAAAGATCACAAGCCTGATCTTGAGGTTGAGAAGGACAGGATTCTGAAAGCTGGTGGTTTCATCCGAGTTGGTCGTGTCAATGGAAGTCTCAACTTGGCACGGGCTATAGGAGACATGGAATTTAAGCAGAATAAAAGTATGCCTGCAGAAAAGCAGATTGTAACGGCCAATCCAGATGTAACAACTGTTGAGCTTTGTGAGGATGACGAGTTTCTTGTTATTGCCTGTGATGGGATCTGGGATTGCATGTCCAGCCAGCAACTGGTCGACTACATTGGAGATCAACTAAAAACAGAGAGTAAACTCTCAGTTATTTGTGAGAGAGTATTTGATAGATGCTTGGCACCCACAGCTGGTGGTGAAGGATGTGACAACATGACTATGATCTTGGTTCAGTTTAAGAAACCCTTTAACCCAAATGCTGCTTCTGTTGAGGAGCTGCCTTCATCCTCCAATCAACCTTCTTCGTCTGATCCGAATGAAGGCTCTTCTAAGACTGAATAG | 1089 | 45.36 | MGIYLSSPKTEKASDDGDNERLRYGLSSMQGWRATMEDAHAACLDLDTSTSFFGVYDGHGGKAVSKFCAKYLHRQVLKHESYMAGDLGTSLQKAFLRMDEMMRGQRGWRELAILGDKMDKISGMIEGFIWSPKSSEANNQLDDWPPEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGDSRCVISRKGQAYNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNKSMPAEKQIVTANPDVTTVELCEDDEFLVIACDGIWDCMSSQQLVDYIGDQLKTESKLSVICERVFDRCLAPTAGGEGCDNMTMILVQFKKPFNPNAASVEELPSSSNQPSSSDPNEGSSKTE | 362 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 3471131 | 3477019 | - | Tan0002924.2 | Tan06g0477 | 755181 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan06g0477 | 362 | ProSiteProfiles | PPM-type phosphatase domain profile. | 23 | 328 | IPR001932 | - | |
Tan06g0477 | 362 | ProSitePatterns | PPM-type phosphatase domain signature. | 52 | 60 | IPR000222 | GO:0043169(InterPro) | |
Tan06g0477 | 362 | SUPERFAMILY | PP2C-like | 3 | 330 | IPR036457 | - | |
Tan06g0477 | 362 | MobiDBLite | consensus disorder prediction | 338 | 362 | - | - | |
Tan06g0477 | 362 | CDD | PP2Cc | 23 | 328 | IPR001932 | - | |
Tan06g0477 | 362 | SMART | PP2C_4 | 13 | 326 | IPR001932 | - | |
Tan06g0477 | 362 | Pfam | Protein phosphatase 2C | 23 | 104 | IPR001932 | - | |
Tan06g0477 | 362 | Pfam | Protein phosphatase 2C | 155 | 313 | IPR001932 | - | |
Tan06g0477 | 362 | SMART | PP2C_SIG_2 | 28 | 328 | IPR001932 | - | |
Tan06g0477 | 362 | Gene3D | - | 1 | 329 | IPR036457 | - | |
Tan06g0477 | 362 | PANTHER | PROTEIN PHOSPHATASE 2C | 19 | 329 | IPR015655 | GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER) | |
Tan06g0477 | 362 | MobiDBLite | consensus disorder prediction | 336 | 362 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g0477 | Tan-Chr6:3471131 | Tan08g0349 | Tan-Chr8:3108855 | 1.80E-33 | dispersed | |
Tan06g0476 | Tan-Chr6:3471131 | Tan06g0477 | Tan-Chr6:3471131 | 7.50E-213 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan06g0477 | K17499 | - | csv:101214132 | 687.567 |