Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0478 ATGATTATCACCGTGAAGGATTCGACGATGGTTACTCCGGCGGAGGAGACGCCTCGCCGGAGTCTCTGGAACTCCAACGTCGACCTGGTCGTCCCGAGTATGCACACGCCGAGCGTCTACTTCTACCGCCCGACCGGCGCTTCCAATTTCTTCGACGGTCAGGTTCTCAAGGATGGCCTCAGCAAGGCGCTGGTGCCGTTCTATCCAATGGCCGGACGGTTGCGGCGCGATGAGGACGGTCGAATCGAGATCGACTGTAATGCCGAAGGTGTGCTTCTTGTCGAGGCTGAGACGACGGCGGTTATCGATGATTTCGGTGATTTCGCGCCGACGTTGCAGCTCCGGCAACTTATTCCGGCCGTCGATTACTCCGGCGGAATCGAATCGTACCCGTTGTTGGTGTTACAGGTGACGCACTTCAAATGCGGCGGCGTTTCGCTCGGCGTCGGAATGCAACACCACGTGGCGGACGGCTTCTCCGGTCTCCACTTCGTCAACACCTGGTCCGACATGTCGCGCGGCCTCGATCTCAAGCTCTCGCCGTTCATCGACCGGACCCTCCTCCGTGCACGGGACCCACCTCAACCGGCCTTCCGACATGTCGAATACCAACCGGCTCCGCCAATGAAAAACCCGGTCCAAGCCGACCCTGCTGGAACCACGGTCTCCATCTTCAAATTCAGCCGCGAGCAGCTCAATCTACTCAAAGCCAAATCCAAAGAAAACGGCAACACCACCAACTACAGCTCCTACGAGATGCTCTCCGGCCACGTCTGGCGGTGCACGTGCAAGGCGCGTGACCTGCCGGCGGATCAGGACACTAAGCTCTACATCGCCACCGATGGCCGTGCCCGGTTGCGCCCACCGCTCCCCAACGGCTACTTCGGCAACGTCATCTTCACCGCGACGCCGTTCGCCGTCGCCGGCGATCTGATGTCCAATCCGACGTGGTTCGCCGCCGGAAAGATCCACGATGCCTTGATTCGTATGGACAACGATTATTTGAAATCCGCTTTGGACTATCTCGAGATTCAGCCGGACATATCGGCGTTGGTCCGTGGGGCTCATACTTTCCGGTGCCCGAATTTGGGGATCACGAGCTGGGTTCGGCTGCCGATTCACGACGCCGATTTCGGGTGGGGCCGGCCGATTTTTATGGGCCCCGGCGGAATTGCGTACGAGGGATTGTCGTTTATAATCCCGAGTGCTTCCGACGATGGCAGCTTGTCGGTGGCGATTTCGCTGCAGACGCGACATATGAAGGTGTTTGAGAAGCTGTTCTTTGATATTTGA 1293 58.55 MIITVKDSTMVTPAEETPRRSLWNSNVDLVVPSMHTPSVYFYRPTGASNFFDGQVLKDGLSKALVPFYPMAGRLRRDEDGRIEIDCNAEGVLLVEAETTAVIDDFGDFAPTLQLRQLIPAVDYSGGIESYPLLVLQVTHFKCGGVSLGVGMQHHVADGFSGLHFVNTWSDMSRGLDLKLSPFIDRTLLRARDPPQPAFRHVEYQPAPPMKNPVQADPAGTTVSIFKFSREQLNLLKAKSKENGNTTNYSSYEMLSGHVWRCTCKARDLPADQDTKLYIATDGRARLRPPLPNGYFGNVIFTATPFAVAGDLMSNPTWFAAGKIHDALIRMDNDYLKSALDYLEIQPDISALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSASDDGSLSVAISLQTRHMKVFEKLFFDI 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3525000 3528254 + Tan0020578.1 Tan06g0478 755182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0478 430 FunFam Tryptamine hydroxycinnamoyl transferase 207 428 - -
Tan06g0478 430 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
Tan06g0478 430 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 421 IPR050317 GO:0016747(PANTHER)
Tan06g0478 430 Gene3D - 1 205 IPR023213 -
Tan06g0478 430 Pfam Transferase family 2 425 - -
Tan06g0478 430 Gene3D - 209 430 IPR023213 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0616 Tan-Chr3:61293105 Tan06g0478 Tan-Chr6:3525000 4.10E-83 dispersed
Tan03g0617 Tan-Chr3:61325617 Tan06g0478 Tan-Chr6:3525000 8.00E-87 dispersed
Tan06g0478 Tan-Chr6:3525000 Tan09g2401 Tan-Chr9:73669446 5.10E-75 dispersed
Tan06g0478 Tan-Chr6:3525000 Tan01g4966 Tan-Chr1:115453742 6.00E-44 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0478 K13065 - csv:101214857 831.632