Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0479 ATGGCGCCTGACCTTGAGGATGAGATCAAGGACGAGAAGAATCCTCGCCCTCTCGATGAGGACGATATAGCTCTTCTCAAGACCTATGGGTTAGGACCCTATTCAACCTATATCAAGAAGGTAGAGAAAGAAATCAAGGATATGGCAAAGAAGGTCAATGATTTATGTGGCATTAAGGAGTCTGACACCGGTTTAGCCGCTCCTAGTCAGTGGGATCTTGTATCTGATAAGCAAATGATGCAGGAAGAGCAGCCTCTTCAGGTGGCGAGATGCACAAAGATCATCAATCCCAACTCTGAAGATGCCAAATATGTTATTAATGTTAAGCAAATTGCCAAGTTTGTTGTTGGACTCGGTGACAAAGTTTCTCCAACAGATATAGAAGAAGGCATGCGTGTAGGTGTTGATAGAAATAAATATCAGATTCAAATTCCTTTGCCTCCCAAAATTGATCCAAGTGTGACCATGATGACGGTAGAAGAAAAACCTGATGTGACCTACAATGATGTTGGTGGATGTAAGGAGCAAATAGAGAAGATGAGAGAGGTTGTTGAGTTACCTATGCTTCATCCTGAGAAATTTGTAAAGCTTGGAATTGATCCTCCAAAAGGAGTTCTTTGCTATGGTCCCCCTGGAACAGGCAAAACACTTCTAGCACGAGCTGTAGCTAACAGAACAGATGCCTGCTTTATTCGTGTTATTGGGAGTGAGCTTGTTCAAAAATACGTAGGTGAGGGAGCTCGGATGGTCAGAGAACTATTCCAGATGGCACGCTCCAAAAAGGCTTGCATAGTGTTTTTCGATGAAGTTGATGCCATAGGAGGTGCTCGTTTCGATGATGGTGTTGGTGGTGACAATGAGGTTCAACGTACAATGCTTGAAATTGTGAATCAACTTGATGGCTTTGATGCACGTGGAAACATCAAAGTTCTGATGGCAACAAATAGGCCTGATACACTTGATCCAGCTCTGTTACGACCTGGAAGGCTGGATCGTAAGGTTGAGTTTGGGCTTCCTGATTTGGAGAGTAGGACACAGATCTTTAAAATCCACACAAGGACCATGAATTGTGAGAGGGACATTCGGTTTGAACTCTTGGCTAGGCTTTGTCCGAATTCTACAGGGGCCGATATCAGGAGTGTCTGCACGGAAGCTGGAATGTATGCCATCCGAGCTAGAAGGAAGACGGTGACAGAGAAGGACTTCCTTGATGCGGTGAACAAGGTGATCAAGGGATATCAAAAGTTCAGTGCAACTCCCAAGTATATGAACCCTTTCTTCCTTTCAATCATCACCTTCAAATTCCGTTCTCAGATCAAAACCATCAAAACTTTCGTTCAGCATTCTACATTTCCCGATCCCAATTTCTTCATCAATTTCCATTTTCAACATCTTCCAGTTCTAGTCAAGCTTTCATCAATGGCTTCCAAGAGCGAAGGCAAAGGCATTGGCATCGATCTCGGCACCACTTACAGCTGCGTCGGCGTTTGGCAAAACGATAGGGTTGAGATTATTGCCAATGACCAAGGCAACAGAACTACACCATCCTATGTGGCTTTCACTGATACCGAACGGCTGATCGGCGATGCGGCCAAGAATCAAGTCGCGATGAATCCTCAGAACACCGTTTTCGATGCGAAACGGCTCATCGGTCGGCGATTCTCCGATTCCTCTGTTCAGAGCGATATGAAGCTCTGGCCATTCAAGGTCGTTGCAGGTCCCGGAGACAAGCCGATGATCGTCGTCAACTACAAAGGCGAAGAGAAGAAGTTTGCGCCGGAGGAGATTTCGTCAATGGTGCTAATCAAGATGAAGGAAATCGCCGAGGCTTACTTAGGGCACAATGTAAAGAACGCCGTGATTACAGTTCCAGCCTATTTCAACGATTCACAGCGGCAGGCCACCAAGGATGCTGGAGCAATCGCCGGCCTAAACGTACTGAGAATCATCAACGAACCAACCGCCGCCGCTATTGCTTACGGTCTGGACAAGAAAGCCTCCCGCTCCGGCGAGAAGAACGTTCTGATCTTCGATCTCGGCGGCGGAACGTTCGACGTTTCGCTGTTGACGATCGAGGAAGGAATCTTCGAAGTGAAAGCCACCGCCGGAGACACTCATCTCGGCGGCGAGGATTTCGATAACCGACTCGTGAACCACTTCGCGGCGGAGTTCAAAAGGAAGCACAAAAAAGACATCGGCGGCAATGCTAGAGCTCTTCGTCGGCTGAGAACGGCCTGCGAAAGGGCGAAACGAACTCTATCTTCGACAACACAAACCACAATCGAAATCGATTCGCTGTACGAAGGAATCGATTTCTACGCCACGATTACCAGAGCGAGATTCGAAGAATTGAACATGGATTTGTTCAGAAGATGTATGGAGCCAGTGGAGAAATGTCTTCGAGATTCCAAAATTGACAAAGGGAAAATACACGATGTCGTTTTGGTAGGCGGTTCCACAAGAATCCCAAAAGTTCAACAGCTATTGCAAGATTTCTTCAACGGAAAGGAGCTCTGCAAGAGCATAAACCCTGACGAAGCCGTCGCGTACGGCGCCACCGTGCAGGCAGCGATTCTATGCGGTGAAGGGAACGAGAAGGTCCAAGATCTGCTTCTTCTCGATGTCACACCTCTAAGCCTCGGAATCGAAACCGCCGGCGGAGTAATGACGGTGTTAATTCCAAGAAACACGACGATTCCGACGAAGAAGGAGCAAGTTTTCTCGACTTATTCGGACAATCAAACGAGCGTTTTAATCCAAGTTTACGAAGGGGAGAGAACAAGAACAAAAGACAATAACCTTCTCGGAACATTTGAGCTCAAGGGGATTCCACCAACGCCGAGAGGAGTGCCGCAAATAAACGTCTGTTTCGACATCGACGCCAATGGGATTCTGAACGTCACGGCGGAGGACAAGACGGCCGGAGTTAAGAACACGATCACCATTACCAACGACAAGGGAAGATTGAGCAGAGATGAGATTGAGAGGATGGTGGAGGAGGCGGAGAAGTACAAGGCGGAGGATGAACAAGTGAAGAAGAAGGTTGAAGCGAAGAACGCCTTAGAAAATTATGCTTATAACATGAGGAACACGGTGAGGGATGAGAAATTGGCCGCAAAGATGAATCCGGCGGAGAAGGGGAAGATAGAGAAGGCGATTGATGAATCGATCGAGTGGCTGGAGAGGAACCAGTTGGCTGAAGTGGAAGAACTTGAAGACAAGCTTAAGGAATTGGAGGGGCTCTGTAATCCTATCATTTCCAAGCTTTATCAGGGTGGTGCTGGCGGAAATGTGCCGATGGGCAACGGCGGTGGTGCTGCCGGCGGCGTCTATGGCAAGGCTGACGCTGTCGGCGCTGGAACTGGCCCAAAGATTGAAGAGGTCGATTGA 3390 47.7 MAPDLEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTYIKKVEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMNPFFLSIITFKFRSQIKTIKTFVQHSTFPDPNFFINFHFQHLPVLVKLSSMASKSEGKGIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDSSVQSDMKLWPFKVVAGPGDKPMIVVNYKGEEKKFAPEEISSMVLIKMKEIAEAYLGHNVKNAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFAAEFKRKHKKDIGGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGIDFYATITRARFEELNMDLFRRCMEPVEKCLRDSKIDKGKIHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGATVQAAILCGEGNEKVQDLLLLDVTPLSLGIETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQTSVLIQVYEGERTRTKDNNLLGTFELKGIPPTPRGVPQINVCFDIDANGILNVTAEDKTAGVKNTITITNDKGRLSRDEIERMVEEAEKYKAEDEQVKKKVEAKNALENYAYNMRNTVRDEKLAAKMNPAEKGKIEKAIDESIEWLERNQLAEVEELEDKLKELEGLCNPIISKLYQGGAGGNVPMGNGGGAAGGVYGKADAVGAGTGPKIEEVD 1129
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3532216 3550418 - Tan0015086.1 Tan06g0479 755183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0479 1129 ProSitePatterns Heat shock hsp70 proteins family signature 2. 676 689 IPR018181 -
Tan06g0479 1129 Gene3D - 34 157 IPR012340 -
Tan06g0479 1129 FunFam Heat shock 70 kDa 708 791 - -
Tan06g0479 1129 FunFam 26S protease regulatory subunit 7 158 337 - -
Tan06g0479 1129 FunFam Heat shock 70 kDa protein 544 599 - -
Tan06g0479 1129 Pfam AAA+ lid domain 360 403 IPR041569 -
Tan06g0479 1129 CDD HSPA1-2_6-8-like_NBD 483 859 - -
Tan06g0479 1129 Gene3D - 665 839 - -
Tan06g0479 1129 Pfam ATPase family associated with various cellular activities (AAA) 205 338 IPR003959 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan06g0479 1129 Coils Coil 1061 1081 - -
Tan06g0479 1129 SUPERFAMILY Actin-like ATPase domain 670 860 IPR043129 -
Tan06g0479 1129 Pfam Hsp70 protein 483 1091 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Tan06g0479 1129 PANTHER HEAT SHOCK PROTEIN 70KDA 483 1053 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
Tan06g0479 1129 ProSitePatterns Heat shock hsp70 proteins family signature 3. 813 827 IPR018181 -
Tan06g0479 1129 Gene3D - 544 599 - -
Tan06g0479 1129 FunFam Heat shock protein 70 483 670 - -
Tan06g0479 1129 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 864 1017 IPR029047 -
Tan06g0479 1129 FunFam Heat shock 70 kDa protein 671 740 - -
Tan06g0479 1129 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 865 1022 IPR029047 -
Tan06g0479 1129 FunFam Heat shock 70 kDa 864 1018 - -
Tan06g0479 1129 Coils Coil 991 1018 - -
Tan06g0479 1129 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 1016 1097 IPR029048 -
Tan06g0479 1129 FunFam Heat shock protein 70 1019 1092 - -
Tan06g0479 1129 Gene3D Actin; Chain A, domain 4 708 791 - -
Tan06g0479 1129 Gene3D - 339 421 - -
Tan06g0479 1129 SMART AAA_5 201 340 IPR003593 GO:0016887(InterPro)
Tan06g0479 1129 FunFam 26S protease regulatory subunit 7 33 157 - -
Tan06g0479 1129 ProSitePatterns Heat shock hsp70 proteins family signature 1. 485 492 IPR018181 -
Tan06g0479 1129 Gene3D - 483 857 - -
Tan06g0479 1129 ProSitePatterns AAA-protein family signature. 308 326 IPR003960 GO:0005524(InterPro)|GO:0016887(InterPro)
Tan06g0479 1129 Pfam 26S proteasome regulatory subunit 7, OB domain 79 147 IPR048723 -
Tan06g0479 1129 Gene3D - 1018 1092 IPR029048 -
Tan06g0479 1129 SUPERFAMILY Actin-like ATPase domain 483 664 IPR043129 -
Tan06g0479 1129 CDD RecA-like_PAN_like 166 336 - -
Tan06g0479 1129 FunFam Heat shock cognate 70 kDa protein 2 792 839 - -
Tan06g0479 1129 FunFam 26S protease regulatory subunit 7 339 410 - -
Tan06g0479 1129 PRINTS 70kDa heat shock protein signature 619 639 - -
Tan06g0479 1129 PRINTS 70kDa heat shock protein signature 842 862 - -
Tan06g0479 1129 PRINTS 70kDa heat shock protein signature 531 539 - -
Tan06g0479 1129 PRINTS 70kDa heat shock protein signature 509 521 - -
Tan06g0479 1129 PRINTS 70kDa heat shock protein signature 810 826 - -
Tan06g0479 1129 PRINTS 70kDa heat shock protein signature 682 692 - -
Tan06g0479 1129 PRINTS 70kDa heat shock protein signature 869 888 - -
Tan06g0479 1129 PRINTS 70kDa heat shock protein signature 481 494 - -
Tan06g0479 1129 PRINTS 70kDa heat shock protein signature 950 966 - -
Tan06g0479 1129 Gene3D - 158 337 IPR027417 -
Tan06g0479 1129 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 427 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0317 Tan-Chr6:2476274 Tan06g0479 Tan-Chr6:3532216 3.80E-74 dispersed
Tan06g0479 Tan-Chr6:3532216 Tan09g1581 Tan-Chr9:67614310 0.00E+00 dispersed
Tan06g0479 Tan-Chr6:3532216 Tan11g0741 Tan-Chr11:6314563 0.00E+00 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0479 K03283 - cit:102619093 1132.47