Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan06g0500 | ATGTGTGTGTGTATGCCCGTTCGCCGCCCCAATTCCGCCACCGGGACTCCGGTGAATATCATTGTCGGATCACATGTTTGGGTTGAGGATCCTGAGGATGCTTGGATTGATGGTCAAGTTACAGAAATTAAAGCCAAAAATGCCACCATAATCACCACCAATGAAAAAACTATTGTTGCAGACATTTCGAGCATATATCCGAAAGACACGGAGGCGCCGCCGGCTGGGGTTGACGACATGACGAAATTGGCGTACCTCCATGAGCCTGGAGTTCTGCATAATCTAGCTTGTCGGTTTTCTCTCAACGAGATATACACTTACACCGGGAATATTCTAATTGCTGTAAATCCTTTTCGGAGACTGCCGCATTTGTATGATATTCACATGATGGAACAGTATAAGGGAGCTACTTTCGGCGAGCTTAGTCCACATCTTTTCGCTGTTGCAGATGCTTGCTACAGATCGATGATTAACGAGCAAGGAAGTCAGTCCATATTAGTAAGTGGGGAGAGTGGTGCAGGTAAAACTGAGACAACAAAGATGCTCATGAGATATCTTGCATTCATGGGAGGCAGATCAGATACTGAAGGAAGAACAGTCGAGCAACAGGTTTTAGAGTCCAATCCCGTATTGGAAGCATTTGGAAATGCCAAAACCGTCAAAAACAACAATTCAAGTCGTTTTGGTAAATTTGTAGAAATACAATTTGATAAGAATTGGAAGATCTCTGGGGCTGCCATTCGTACATACCTTCTTGAACGGTCGCGTGTTTGCCAAGTCTCAGACCCTGAGAGAAACTACCATTGTTTTTACATGCTCTGTGCAGCACCACCAGAAGATGTCAAGAAATACAAATTAGGAGACCCAAGGATGTTTCATTATCTTAATCAAACGAATTGTTATGAAGTGGCAAACGTTGATGATTCAAGAGAGTACTTAGAGACCAGAAATGCCATGGATGTTGTCGGAATCAGCCAGGATGAACAGGATGCTATATTTCGTGTTGTAGCTGCTATACTGCATCTTGGAAACATTGACTTCATGAAAGGAACGGAAGTTGACTCCTCGAAAGTGAAAGACGAGAAATCAAATTATCATCTTCAAACAGCAGCAGAGCTACTCATGTGTGATGTAAAGGCACTGGAGCATTCACTCTGCCAGCGTGTCATAGTGACTCCTGATGGTAAAATTACAAAGCCACTGGATCCAGATTCAGCAGCCTTGAGTCGTGATGCATTGGCAAAAACTGTGTATTCTAGGCTGTTTGATTGGATTGTGGACAAAATTAATAGTTCAATTGGCCAAGATCCCAATGCAGCGAGCTTAATTGGTGTCCTTGATATTTATGGATTTGAAAGCTTCAAGGTCAATAGTTTTGAGCAGCTCTGTATCAACCTGACCAATGAGAAGTTGCAGCAACATTTTAATCAGCATGTTTTCAAGATGGAGCAAGAGGAGTATACAAAAGAAGAAATTAACTGGAGCTATGTTGAGTTTGTAGATAATCAGGATGTCCTTGATCTAATTGAGAAGAAACCTGGAGGTATAATTGCCCTGCTTGATGAAGCCTGTATGTTTCCAAAGTCAACACATGAAACATTTGCTCAAAAGATGTATCAGACGTACAAAGCACATAAGCGGTTCAGCAAGCCAAAACTTGCTCGAACAGACTTCACAATAAACCATTATGCTGGAGATGTTACATACCAAGCAGATCAATTTCTAGATAAAAACAAGGACTATGTAGTGGCAGAACATCAGGCTCTTCTGAATGCCTCACAATGCTCCTTTGTTGCTAATCTTTTCCCTCCACTTCCTGAGGAGAGCTCAAAGCAATCCAAGTTTTCCTCTATTGGTACTCGGTTCAAGCAACAACTACAAGCTCTCATGGAGACATTAAATACTACAGAACCACATTATATTAGATGTGTAAAGCCCAACACAGTTTTGAAGCCTGGAATCTTTGAGAACTTCAATGTGTTAAACCAATTGAGGTGTGGGGGAGTGCTCGAGGCCATTCGAATAAGTTGTGCAGGATATCCAACGAAAAGAACATTTGATGAGTTCCTCGATCGTTTTGGAATGCTTGCTCCAGATATTTCAGACGGGTCTGATGAAAAATCAGCATGCATTGCAATATGTGACAGAATGGGCTTAAAGGGTTATCAGATTGGAAAAACAAAAGTGTTTCTCAGAGCTGGACAAATGGCTGAGTTGGATGCACGACGAACTGAAATATTGGCCAATGCTGTAAGACGCATCCAGCGGCAAATCCGAACCCATCTAACTAGAAAAGAGTTTATCGCCTTGAGGAAAGCTACAATTCATATGCAGAAACTTTGGAGAGCACAACTTGCTCGTAAGCTGTATGAGCAAATGAGGAGAGAAGCTGCTTCAATCCGTATACAGAAGCATGCACGTGCTCACGCAGATAGAAAATCTTACAAAAAATTACTTACATCAGCTATAGTTATTCAAACTGGTATGCGAGCAATGGCTGCTAGAAATGAGTATAGACACAGAAGAAGAACAAAGGCTGCTATCATTGTTCAGACTGAATGGCGACGGGCATCAGCTATTTCAGCTTACAAACAGCAGCAGAAGGCAACTCTTTCCCTTCAATGCCTCTGGCGAGCTAAAGTTGCAAGGAAAGAGCTTAGAAAACTAAGGATGGCTGCAAGAGAAACAGGGGCACTCAAGGAGGCTAAGGACAAATTGGAGAAGCGTGTTGAGGAGCTAACATGGCGCCTAGAATTTGAGAAGCACTTGAGGATGGATGTTGAAGAAGCCAAGGGGCAAGAGGTTGCAAAGTTACAAACTGCTTTGGAAGAAATGCAAGGGCAGCTGGATGAAGCCAATGCCGCAATCATACGTGAGAGAGAAGCAGCAAAATTGGCCATAGAACAAGCTCCACCAGTCATTAAGGAAGTACCTGTGGTTGACGAGACCAAGCTGGAAATGCTGAGAAATAACAATGAAGAACTTGAGGGTGAGGTTGGAGAGCTGAAGAAGAAAATCGAGGAATTCGAAGAAAAGTTTGCTGAGGTGGAAAAGGAAAGTAAAGCTAGACTCAAGGAGGCAGAAGAGGCACAATTGAAATCAATGCAACTTCAAGAGACTATTGAGAGATTGGAATCAAATTTATCTAGCCTTGAGTCCGAGAACCAGGTTCTGCGCCAGCAGGCTTTGGTCGCAGCAGACAATGAATCCCTCTCTGAAGAACTGCAAGTCCTCAAGAGTAAGATCGGAAGTTTAGAGGCAGAGAATGAAGTTCTCCGCAATCGGACAGTAGTTGTTGAGCATGTGTCTACTCCTGCAGGGGTGCTTGCAGAAAGCAAGGCTTTAGATAACGGGCATATAATGGAAGAAGAGATTAAATCAACTAAGGAACCACCTGTTGTTCCCGTCCTAGCCAAGCAAGGCTCACTCACGGAAAAACAACAGGAAAATCACGATGTCCTGCTCAAGTGCTTAGCAGAAGACAAACGTTTTGACAAAGGCAGACCAGTTGCAGCTTGTATTGTCTACAAGACACTTCTTCAATGGAGATCTTTTGAAGCAGAGAAGACAAATATATTTGACAGAATTATTCACACAATCAGATCTTCTATAGAGAGTCAAGAAAATATCAGTGATCTGGCGTATTGGCTTTCAACCACTTCTACCCTTCTCTATCTCCTTCAAAGTTCACTCAAGGCAACGAATACAAGTACTGCAGTTTCACATCGCAATCGAGCTTCTCCTTCAACCTTATTTGGTCGTATGGCATATGGTCTTCGATCATCTTCAGTGGGTATGGGAATTTCCAGTGGATACAGTGGAATGGTGGGAAAGATGAACAATCAATCTAAAGTTGAAGCCAAGTACCCAGCACTTCTTTTTAAGCAACATCTGGCAGCATGCATTGAAAAATTGTTTGGGATGATACGTGATAATTTGAAGAAAGAAATTAGCCCTTTCTTGCATCTATGCATTCAGGCACCAAGATCAGTGAGGGCCAGATCAATAAGAGGGTCATCTAAAAATATCCATTCAAACATTGTTGCAAAACAGCAAGCATCAAGTATTCACTGGCAAAGCATTGTTAATAAGCTAGACCAGACGTTGGATATAATGTCTGAAAACCATGTTCCCTCCATGATCATGAGAAAAATCTTCTTCCAGGTTTTCTCATTCATAAATGTCCAGCTCTTCAATAGCTTATTACTACGACGTGAGTGCTGTTCCTTCAGTAATGGAGAGTACTTAAAGGTAGGTCTGCAGGAGTTGGAGCAATGGTGTACCAAAGCAACTGATACGTATGCTGGCTCTTCCTGGGATGAACTTCAGCACATAAGACAAGCAGTAGGATTTCTGGTGTTACATCAGAAGTCCCAGAAAAGTTTGAATGAGATCACAGATGAATTATGCCCGATACTGAGCATCCCGCAAATATATCGTATAGGAACGATGTTCTGGGACGACAAATATGGAACTCAGGGGTTATCTCCTGATATAATTGGAAAAATGAGAGTCCTATTGGCGGAAGACTCCATCAACATCCCAAACAACTCTTTCCTGCTTGATGTGGACTCAAGCATACCATTTTCAATAGAAGAAATATTTCGGTCCTTCGGCGAGGTTAACCTGTCCGATGTCGACCCGCCACCACTTATAAGACAAAGATCAGATTTCCATTTTCTACTGCAGCAACTGACTGAATGA | 4704 | 42.43 | MCVCMPVRRPNSATGTPVNIIVGSHVWVEDPEDAWIDGQVTEIKAKNATIITTNEKTIVADISSIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLACRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGATFGELSPHLFAVADACYRSMINEQGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSDTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNWKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKKYKLGDPRMFHYLNQTNCYEVANVDDSREYLETRNAMDVVGISQDEQDAIFRVVAAILHLGNIDFMKGTEVDSSKVKDEKSNYHLQTAAELLMCDVKALEHSLCQRVIVTPDGKITKPLDPDSAALSRDALAKTVYSRLFDWIVDKINSSIGQDPNAASLIGVLDIYGFESFKVNSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKAHKRFSKPKLARTDFTINHYAGDVTYQADQFLDKNKDYVVAEHQALLNASQCSFVANLFPPLPEESSKQSKFSSIGTRFKQQLQALMETLNTTEPHYIRCVKPNTVLKPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFDEFLDRFGMLAPDISDGSDEKSACIAICDRMGLKGYQIGKTKVFLRAGQMAELDARRTEILANAVRRIQRQIRTHLTRKEFIALRKATIHMQKLWRAQLARKLYEQMRREAASIRIQKHARAHADRKSYKKLLTSAIVIQTGMRAMAARNEYRHRRRTKAAIIVQTEWRRASAISAYKQQQKATLSLQCLWRAKVARKELRKLRMAARETGALKEAKDKLEKRVEELTWRLEFEKHLRMDVEEAKGQEVAKLQTALEEMQGQLDEANAAIIREREAAKLAIEQAPPVIKEVPVVDETKLEMLRNNNEELEGEVGELKKKIEEFEEKFAEVEKESKARLKEAEEAQLKSMQLQETIERLESNLSSLESENQVLRQQALVAADNESLSEELQVLKSKIGSLEAENEVLRNRTVVVEHVSTPAGVLAESKALDNGHIMEEEIKSTKEPPVVPVLAKQGSLTEKQQENHDVLLKCLAEDKRFDKGRPVAACIVYKTLLQWRSFEAEKTNIFDRIIHTIRSSIESQENISDLAYWLSTTSTLLYLLQSSLKATNTSTAVSHRNRASPSTLFGRMAYGLRSSSVGMGISSGYSGMVGKMNNQSKVEAKYPALLFKQHLAACIEKLFGMIRDNLKKEISPFLHLCIQAPRSVRARSIRGSSKNIHSNIVAKQQASSIHWQSIVNKLDQTLDIMSENHVPSMIMRKIFFQVFSFINVQLFNSLLLRRECCSFSNGEYLKVGLQELEQWCTKATDTYAGSSWDELQHIRQAVGFLVLHQKSQKSLNEITDELCPILSIPQIYRIGTMFWDDKYGTQGLSPDIIGKMRVLLAEDSINIPNNSFLLDVDSSIPFSIEEIFRSFGEVNLSDVDPPPLIRQRSDFHFLLQQLTE | 1567 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 3835318 | 3848572 | + | Tan0021878.1 | Tan06g0500 | 755204 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan06g0500 | 1567 | Coils | Coil | 889 | 923 | - | - | |
| Tan06g0500 | 1567 | ProSiteProfiles | IQ motif profile. | 747 | 774 | - | - | |
| Tan06g0500 | 1567 | FunFam | unconventional myosin-Va | 798 | 845 | - | - | |
| Tan06g0500 | 1567 | Gene3D | - | 680 | 742 | - | - | |
| Tan06g0500 | 1567 | Pfam | Myosin N-terminal SH3-like domain | 22 | 63 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g0500 | 1567 | Coils | Coil | 1068 | 1095 | - | - | |
| Tan06g0500 | 1567 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 325 | 614 | - | - | |
| Tan06g0500 | 1567 | Pfam | DIL domain | 1385 | 1488 | IPR002710 | - | |
| Tan06g0500 | 1567 | ProSiteProfiles | Dilute domain profile. | 1194 | 1509 | IPR002710 | - | |
| Tan06g0500 | 1567 | SMART | iq_5 | 842 | 864 | IPR000048 | GO:0005515(InterPro) | |
| Tan06g0500 | 1567 | SMART | iq_5 | 865 | 887 | IPR000048 | GO:0005515(InterPro) | |
| Tan06g0500 | 1567 | SMART | iq_5 | 817 | 839 | IPR000048 | GO:0005515(InterPro) | |
| Tan06g0500 | 1567 | SMART | iq_5 | 746 | 768 | IPR000048 | GO:0005515(InterPro) | |
| Tan06g0500 | 1567 | SMART | iq_5 | 794 | 816 | IPR000048 | GO:0005515(InterPro) | |
| Tan06g0500 | 1567 | SMART | iq_5 | 769 | 791 | IPR000048 | GO:0005515(InterPro) | |
| Tan06g0500 | 1567 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 49 | 798 | IPR027417 | - | |
| Tan06g0500 | 1567 | Gene3D | - | 265 | 323 | - | - | |
| Tan06g0500 | 1567 | FunFam | Class V myosin | 452 | 599 | - | - | |
| Tan06g0500 | 1567 | Gene3D | - | 798 | 847 | - | - | |
| Tan06g0500 | 1567 | Gene3D | - | 746 | 797 | - | - | |
| Tan06g0500 | 1567 | PRINTS | Myosin heavy chain signature | 162 | 187 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g0500 | 1567 | PRINTS | Myosin heavy chain signature | 442 | 470 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g0500 | 1567 | PRINTS | Myosin heavy chain signature | 209 | 236 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g0500 | 1567 | PRINTS | Myosin heavy chain signature | 105 | 124 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g0500 | 1567 | PRINTS | Myosin heavy chain signature | 495 | 523 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g0500 | 1567 | Coils | Coil | 935 | 962 | - | - | |
| Tan06g0500 | 1567 | ProSiteProfiles | IQ motif profile. | 818 | 847 | - | - | |
| Tan06g0500 | 1567 | ProSiteProfiles | Myosin motor domain profile. | 75 | 744 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g0500 | 1567 | Pfam | IQ calmodulin-binding motif | 797 | 816 | IPR000048 | GO:0005515(InterPro) | |
| Tan06g0500 | 1567 | Pfam | IQ calmodulin-binding motif | 750 | 767 | IPR000048 | GO:0005515(InterPro) | |
| Tan06g0500 | 1567 | Pfam | IQ calmodulin-binding motif | 868 | 887 | IPR000048 | GO:0005515(InterPro) | |
| Tan06g0500 | 1567 | Pfam | IQ calmodulin-binding motif | 771 | 790 | IPR000048 | GO:0005515(InterPro) | |
| Tan06g0500 | 1567 | ProSiteProfiles | IQ motif profile. | 770 | 799 | - | - | |
| Tan06g0500 | 1567 | ProSiteProfiles | IQ motif profile. | 866 | 895 | - | - | |
| Tan06g0500 | 1567 | SMART | DIL_2 | 1384 | 1491 | IPR002710 | - | |
| Tan06g0500 | 1567 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 798 | 895 | IPR027417 | - | |
| Tan06g0500 | 1567 | CDD | MYSc_Myo11 | 89 | 732 | IPR036018 | - | |
| Tan06g0500 | 1567 | ProSiteProfiles | IQ motif profile. | 795 | 821 | - | - | |
| Tan06g0500 | 1567 | FunFam | Myosin heavy chain | 265 | 320 | - | - | |
| Tan06g0500 | 1567 | FunFam | Myosin XI D | 680 | 742 | - | - | |
| Tan06g0500 | 1567 | FunFam | Myosin 2 | 325 | 441 | - | - | |
| Tan06g0500 | 1567 | FunFam | unconventional myosin-Va | 846 | 893 | - | - | |
| Tan06g0500 | 1567 | Coils | Coil | 985 | 1061 | - | - | |
| Tan06g0500 | 1567 | PANTHER | MYOSIN | 25 | 1506 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Tan06g0500 | 1567 | Gene3D | - | 452 | 636 | - | - | |
| Tan06g0500 | 1567 | Pfam | Myosin head (motor domain) | 77 | 732 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g0500 | 1567 | FunFam | unconventional myosin-Va | 749 | 797 | - | - | |
| Tan06g0500 | 1567 | SMART | MYSc_2a | 69 | 745 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g0500 | 1567 | Gene3D | Kinesin motor domain | 78 | 675 | IPR036961 | - | |
| Tan06g0500 | 1567 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 21 | 70 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g0500 | 1567 | CDD | MyosinXI_CBD | 1145 | 1532 | IPR037975 | GO:0007015(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan06g0500 | Tan-Chr6:3835318 | Tan09g1110 | Tan-Chr9:63396910 | 0.00E+00 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan06g0500 | K10357 | - | csv:101207221 | 2853.93 |