Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0568 ATGGCTGACCAGGTTCAACATCCCACCATCTATCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGTTGCTTCGGGATTCCGTGCTTGCGATGATGGCTTTAGGAACCCTGCACTCTATCAGAGACGTGCAATTGTCAGCAATTACTCAAATGCTGCTTTTCAATACCCTGCTGTGCAATCCTGTGTTGCTACAACTGATCTTTCTAGGGTTGCCTCAACTGCCTCCCCCATTTTTGTTGCTGCCCCTGCTGAGAAAGGACACTTTCTGATTGACTTTCTCATGGGTGGTGTCTCTGCTGCTGTATCCAAGACAGCTGCTGCCCCCATCGAGCGCGTCAAGCTCTTAATTCAAAATCAGGATGAGATGATTAAAGCTGGGCGTCTGTCTGAGCCATACAAGGGTATTGGTGATTGTTTCAAACGTACAATTCAAGAGGAGGGTTTTGGTTCATTGTGGAGGGGAAACACTGCCAATGTCATCCGTTATTTCCCTACTCAAGCATTGAACTTCGCTTTCAAGGATTACTTCAAGAGACTTTTCAACTTCAAGAAGGACAGGGATGGTTACTGGAAATGGTTTGCTGGTAATCTGGCATCAGGTGGTGCAGCTGGTGCTTCATCCCTTCTTTTTGTTTACTCTCTTGACTACGCTCGTACCAGGTTGGCAAACGATGCCAAGGCTGCCAAGAAAGGTGGAGAAAGGCAATTCAATGGATTGGTTGATGTCTACAGGAAGACATTGCAGTCTGATGGTGTTGCTGGTCTTTACCGTGGGTTCAACATTTCTTGTGTTGGTATCATTGTGTACCGTGGTTTATACTTTGGAATGTACGATTCTCTGAAGCCCGTTGTTTTGACCGGGAAGTTGCAGGATAGCTTCTTCGCTAGCTTTGCCCTTGGTTGGCTCATCACCAACGGTGCTGGGCTCGCATCCTACCCAATTGACACCGTTCGTAGAAGAATGATGATGACATCCGGTGAAGCAGTCAAGTACAAGAGCTCAATGGATGCCTTCTCTCAGATCTTGAAGAACGAAGGCGCCAAGTCTCTCTTCAAGGGTGCTGGTGCTAACATTCTCCGTGCCGTTGCCGGTGCTGGTGTGCTCGCGGGTTATGACAAGTTGCAGGTGATCGTCTTCGGCAAGAAGTACGGATCTGGTGGCGCTTAA 1173 48.34 MADQVQHPTIYQKVAGQLSLQSRVASGFRACDDGFRNPALYQRRAIVSNYSNAAFQYPAVQSCVATTDLSRVASTASPIFVAAPAEKGHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTIQEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLQSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4364711 4367643 + Tan0017832.1 Tan06g0568 755272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0568 390 Pfam Mitochondrial carrier protein 193 286 IPR018108 -
Tan06g0568 390 Pfam Mitochondrial carrier protein 293 381 IPR018108 -
Tan06g0568 390 Pfam Mitochondrial carrier protein 89 185 IPR018108 -
Tan06g0568 390 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 87 387 IPR002113 GO:0005471(InterPro)|GO:0005471(PANTHER)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Tan06g0568 390 PRINTS Mitochondrial carrier protein signature 106 120 IPR002067 GO:0055085(InterPro)
Tan06g0568 390 PRINTS Mitochondrial carrier protein signature 156 176 IPR002067 GO:0055085(InterPro)
Tan06g0568 390 PRINTS Mitochondrial carrier protein signature 258 276 IPR002067 GO:0055085(InterPro)
Tan06g0568 390 PRINTS Mitochondrial carrier protein signature 208 226 IPR002067 GO:0055085(InterPro)
Tan06g0568 390 PRINTS Mitochondrial carrier protein signature 302 324 IPR002067 GO:0055085(InterPro)
Tan06g0568 390 PRINTS Mitochondrial carrier protein signature 93 106 IPR002067 GO:0055085(InterPro)
Tan06g0568 390 FunFam ADP,ATP carrier protein, mitochondrial 91 386 - -
Tan06g0568 390 Gene3D Mitochondrial carrier domain 91 386 IPR023395 -
Tan06g0568 390 ProSiteProfiles Solute carrier (Solcar) repeat profile. 293 379 IPR018108 -
Tan06g0568 390 PRINTS Adenine nucleotide translocator signature 193 206 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Tan06g0568 390 PRINTS Adenine nucleotide translocator signature 134 155 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Tan06g0568 390 PRINTS Adenine nucleotide translocator signature 90 102 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Tan06g0568 390 PRINTS Adenine nucleotide translocator signature 167 179 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Tan06g0568 390 PRINTS Adenine nucleotide translocator signature 298 314 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Tan06g0568 390 ProSiteProfiles Solute carrier (Solcar) repeat profile. 88 181 IPR018108 -
Tan06g0568 390 ProSiteProfiles Solute carrier (Solcar) repeat profile. 193 285 IPR018108 -
Tan06g0568 390 SUPERFAMILY Mitochondrial carrier 89 375 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1625 Tan-Chr2:75589694 Tan06g0568 Tan-Chr6:4364711 8.00E-57 dispersed
Tan05g2332 Tan-Chr5:74759570 Tan06g0568 Tan-Chr6:4364711 1.90E-108 dispersed
Tan06g0568 Tan-Chr6:4364711 Tan06g0570 Tan-Chr6:4376319 6.10E-221 dispersed
Tan06g0568 Tan-Chr6:4364711 Tan06g0569 Tan-Chr6:4364711 2.50E-166 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0568 K05863 - csv:101203733 738.799