Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan06g0570 | ATGGCTGACCAGGTTCAACATCCCACCATCTATCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGTTGCTTCGGGATTCCGTGCTTGCGATGATGGCTTTAGGAACCCTGCACTCTATCAGAGACGTGCATCGGTCAGCAATTACTCAAATGCTGCTTTTCAATACCCTACTGTGCAATCCTGTGTTGCTACAACTGATCTTTCTAGGGTTGCCTCAACTGCCTCCCCCATTTTTGTTGCTGCCCCTGCTGAGAAAGGACACTTTCTGATTGACTTTCTCATGGGTGGTGTCTCTGCTGCTGTATCCAAGACAGCTGCTGCCCCCATCGAGCGCGTCAAGCTCTTAATTCAAAATCAAGATGAGATGATTAAAGCTGGACGTCTGTCTGAGCCATACAAGGGTATTGGTGATTGTTTCAAACGTACAATTCAAGAGGAGGGTTTTGGTTCATTGTGGAGGGGAAACACTGCCAATGTCATCCGTTATTTCCCTACTCAAGCATTGAACTTCGCTTTCAAGGATTACTTCAAGAGACTTTTCAACTTCAAGAAGGACAGGGATGGTTACTGGAAATGGTTTGCTGGTAACCTTGCATCAGGTGGTGCAGCTGGTGCTTCATCCCTTCTTTTTGTTTACTCTCTTGACTATGCTCGTACCCGGTTGGCAAACGATGCCAAGGCTGCCAAGAAAGGTGGAGAAAGGCAATTCAATGGTTTGGTTGATGTCTACAGGAAGACATTGCAGTCTGATGGTGTTGCTGGTCTTTACCGTGGATTCAACATTTCTTGTGTTGGTATCATTGTGTACCGTGGTTTATACTTTGGAATGTACGATTCTCTGAAGCCTGTTGTCTTGACCGGAAAGTTGCAGGATAGTTTCTTCGCTAGCTTTGCCCTTGGTTGGCTTATCACCAACGGTGCTGGCCTTGCATCCTACCCAATTGACACTGTTCGTAGAAGAATGATGATGACATCCGGTGAAGCAGTCAAGTACAAGAGCTCAATGGACGCCTTCTCTCAGATCTTGAAGAACGAAGGTGCCAAGTCTCTCTTCAAGGGTGCTGGTGCTAACATTCTCCGTGCTGTTGCCGGTGCTGGTGTGCTCGCTGGTTATGACAAGTTGCAGGTGATCGTTTTCGGGAAGAAATATGGATCTGGTGGTGCTTAA | 1173 | 47.23 | MADQVQHPTIYQKVAGQLSLQSRVASGFRACDDGFRNPALYQRRASVSNYSNAAFQYPTVQSCVATTDLSRVASTASPIFVAAPAEKGHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTIQEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLQSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA | 390 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 4376319 | 4379124 | + | Tan0000828.1 | Tan06g0570 | 755274 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan06g0570 | 390 | Pfam | Mitochondrial carrier protein | 193 | 286 | IPR018108 | - | |
| Tan06g0570 | 390 | Pfam | Mitochondrial carrier protein | 293 | 381 | IPR018108 | - | |
| Tan06g0570 | 390 | Pfam | Mitochondrial carrier protein | 89 | 185 | IPR018108 | - | |
| Tan06g0570 | 390 | PRINTS | Mitochondrial carrier protein signature | 106 | 120 | IPR002067 | GO:0055085(InterPro) | |
| Tan06g0570 | 390 | PRINTS | Mitochondrial carrier protein signature | 156 | 176 | IPR002067 | GO:0055085(InterPro) | |
| Tan06g0570 | 390 | PRINTS | Mitochondrial carrier protein signature | 258 | 276 | IPR002067 | GO:0055085(InterPro) | |
| Tan06g0570 | 390 | PRINTS | Mitochondrial carrier protein signature | 208 | 226 | IPR002067 | GO:0055085(InterPro) | |
| Tan06g0570 | 390 | PRINTS | Mitochondrial carrier protein signature | 302 | 324 | IPR002067 | GO:0055085(InterPro) | |
| Tan06g0570 | 390 | PRINTS | Mitochondrial carrier protein signature | 93 | 106 | IPR002067 | GO:0055085(InterPro) | |
| Tan06g0570 | 390 | FunFam | ADP,ATP carrier protein, mitochondrial | 91 | 386 | - | - | |
| Tan06g0570 | 390 | Gene3D | Mitochondrial carrier domain | 91 | 386 | IPR023395 | - | |
| Tan06g0570 | 390 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 293 | 379 | IPR018108 | - | |
| Tan06g0570 | 390 | PRINTS | Adenine nucleotide translocator signature | 193 | 206 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Tan06g0570 | 390 | PRINTS | Adenine nucleotide translocator signature | 134 | 155 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Tan06g0570 | 390 | PRINTS | Adenine nucleotide translocator signature | 90 | 102 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Tan06g0570 | 390 | PRINTS | Adenine nucleotide translocator signature | 167 | 179 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Tan06g0570 | 390 | PRINTS | Adenine nucleotide translocator signature | 298 | 314 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Tan06g0570 | 390 | PANTHER | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED | 87 | 387 | IPR002113 | GO:0005471(InterPro)|GO:0005471(PANTHER)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Tan06g0570 | 390 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 88 | 181 | IPR018108 | - | |
| Tan06g0570 | 390 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 193 | 285 | IPR018108 | - | |
| Tan06g0570 | 390 | SUPERFAMILY | Mitochondrial carrier | 89 | 375 | IPR023395 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan02g0206 | Tan-Chr2:1750362 | Tan06g0570 | Tan-Chr6:4376319 | 2.00E-160 | dispersed | |
| Tan02g0207 | Tan-Chr2:1750362 | Tan06g0570 | Tan-Chr6:4376319 | 2.00E-160 | dispersed | |
| Tan06g0568 | Tan-Chr6:4364711 | Tan06g0570 | Tan-Chr6:4376319 | 6.10E-221 | dispersed | |
| Tan06g0570 | Tan-Chr6:4376319 | Tan08g2129 | Tan-Chr8:73119979 | 4.40E-25 | dispersed | |
| Tan06g0569 | Tan-Chr6:4364711 | Tan06g0570 | Tan-Chr6:4376319 | 3.60E-165 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan06g0570 | K05863 | - | csv:101203733 | 738.028 |