Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0573 ATGGCTATGGCTGGGCGTATGAGATCGATCATCCCTCAATTCAATCAGCTTCTGAAATCAGAGTCTCAGACTCTGAGACCTGCTCTCCTAAGAGCCCTACTTTGCCCGACGACACCCAACTCCGAGGTCTCAAAGAAATATTCAACTGCTTCCAAGAAAAGTGAGGTCAAAGTTAAAGTTCCTCTGGCTTTGTTTGGAGGGTCTGGAAACTATGCCTCTGCTTTGTACCTTGCAGCAGTAAAATCTAATTCCTTGGATAAGGTTGAGACAGAGCTTCTTGACCTTGTTGAGGCTTCACAGAGAAGTGCCACCTTTTCTCAGTTCACAAGAGATCTCTCGGTGCCTGCAGATACTAGGGTCAAGGCTATTACTGATATTTGCGCTGCAGCTAAATTTTCAGAAGTTATAAAAAACTTTTTGGTTTTATTGGCTGAGTATGGAAGGCTGAGATACATAGACAGCATTGCAAAGCGGTTTCTGGAGTTGACAATGGCTCATAGAGGAGAGGTGAAGGCCATTGTGACAACAGTTATTCCCCTCCCTCCTGAAGAAGAGAAAGAACTGAAGGAGACATTGCAGGATATTATTGGACAAGGGAAGAAGGTCAAGCTTGAACAGAAGATTGATCCAAGCATACTTGGGGGTCTAGTAGTAGAATTTGACGAGAAGGTGTTCGACATGTCGATTAAGAACAGAGCACGAAAGATGGAGAGGTTCTTGCGAGAACCTGGTAACCTCGACAGCCTGTGA 750 44.8 MAMAGRMRSIIPQFNQLLKSESQTLRPALLRALLCPTTPNSEVSKKYSTASKKSEVKVKVPLALFGGSGNYASALYLAAVKSNSLDKVETELLDLVEASQRSATFSQFTRDLSVPADTRVKAITDICAAAKFSEVIKNFLVLLAEYGRLRYIDSIAKRFLELTMAHRGEVKAIVTTVIPLPPEEEKELKETLQDIIGQGKKVKLEQKIDPSILGGLVVEFDEKVFDMSIKNRARKMERFLREPGNLDSL 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4397549 4402010 + Tan0001064.1 Tan06g0573 755277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0573 249 PRINTS ATP synthase delta subunit signature 67 86 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Tan06g0573 249 PRINTS ATP synthase delta subunit signature 200 215 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Tan06g0573 249 PRINTS ATP synthase delta subunit signature 148 162 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Tan06g0573 249 PRINTS ATP synthase delta subunit signature 137 148 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Tan06g0573 249 PRINTS ATP synthase delta subunit signature 215 233 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Tan06g0573 249 Pfam ATP synthase delta (OSCP) subunit 69 238 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Tan06g0573 249 Hamap ATP synthase subunit delta [atpD]. 63 242 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Tan06g0573 249 NCBIfam ATP synthase F1 subunit delta 70 239 IPR000711 GO:0015986(InterPro)|GO:0046933(InterPro)
Tan06g0573 249 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 68 169 IPR026015 -
Tan06g0573 249 PANTHER ATP SYNTHASE DELTA CHAIN 1 242 IPR000711 GO:0000274(PANTHER)|GO:0015986(PANTHER)|GO:0015986(InterPro)|GO:0042776(PANTHER)|GO:0045261(PANTHER)|GO:0046933(PANTHER)|GO:0046933(InterPro)
Tan06g0573 249 Gene3D - 67 160 IPR026015 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2430 Tan-Chr4:83083472 Tan06g0573 Tan-Chr6:4397549 1.50E-92 dispersed
Tan04g2429 Tan-Chr4:83083472 Tan06g0573 Tan-Chr6:4397549 4.20E-92 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0573 K02137 - csv:101206351 365.925