Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0598 ATGGCGAGGACTAGGGTTTATGAGCCATCGCGATCGTTAGAAAGTGATACATGCACGATTCGCCTGACTGAAATTTTCGGGAGGGCGACCAGGTCTATTTTGGGCTTCTTTCTCATGGTGGGTCTTTGCAATGGTGTGCATTACCTTATGAGGCCCTTTTCTCAACCTCGTATTAGCTCTGATACGATCGTAGGTTTGGTTATTGGCAGCTTCATAAGGAAACACCTCGATTTATCAACGGTTAGGACGCTGCGTTATATCGTTGACTTTGGTATGGTATGCTATATGTTCGTGCTGGGATTGGAGATGGATCCGTATGTACTCTTCAAAGCACCTACACGTGATGCTAAAGTAGCTTATGCTGGCATGATTTCGACACTCATCTTAGCTTGTTCCATAACCCCATTTATCAGCCTTTCAAAGACAAAAGAACTCAGTTTCATCCTCTCCCTCTCAACTGTCCTCTCTAGCACAGCTTCTCCTGTGCTAACCCGTTTGATCACCTGTCTTAAAATAGGCAAGTCAGATATAGGCCGGCTCGTTATCGCTGCTGGGATGCATGCTGATTTTATATCCACCATCATTATCTGTATCGGTTATCTCTTTTGCAAATGTCAAGAGACACGCATCTCCCTTATAAAAGGTTTTCAATTAGGTATTGTGTTATTGATCCAGACAATACTCGCAGCGAAGGTTTCACCGGCATTCATGAACTGGGTAAATAACGAAAACCCAGAGGGCAAACCTATGAAAGGTCCTCATCTGGTTCTTGCAGTTGCTTTCATGGCCTTCCTTTGCAGCTGCCCTACTATATTTGGTTACAATCCAATTCTCAGTGCATTCTTAGCTGGAACGTTTTTACCTCGAGAAGGTAGAGTATCAAGATGGGCAATTGGAAAAATTAACTACCTGCTTTCTACCATTTTCTATCCCATCTTCTTCGTTTGGATGGGGGTTGAATCCAGGTTGGCTGACTTTGAACCTGGGCAAATAATGACATGGGTCAGGTTACTTCTGCTTTTTGCTATTGCAACCGTAGGAAAAGTTGTTGGTACTGTCATTTCCGGGGCCATTTTGGGGTTTCATTGGCCTGAATCAGTAGCACTTGGGCTGCTGTTAACCATGAAGGGCCATTTTCATATATACTTAGCCATTGCTGCAAAAACAGCTGGAAAGACGACCACATCTACGAGCCTTGTGATGGTAATTGTAATCTTCTTCACAATAGTGCATGCTCCAAACGTTGTAGCACATATAATCAAAAGGGCGAGGAAACGCACACCTACACATCGCATGTCGCTCCAATTGCTTGATCCATCAAGTGAGCTTAAGATCTTGTTATGTATACATGGACCTCAGAACACTACAGCAGCCCTTAACATCATGGAGATTTCTCGAGGGACAGCTAAGCCTGGAGTTGTTGTATATGTCACAGACATGATTGAACTTACAGATGAAATAGCAGCCACATTAGTGCAAGGTGAAGGAGTGGACACCTTGACTGTAACCCACACAGGAGTGACACAAATAAGAGATCAAGTTACTGCTGCAGTTCAGAGCTATGTAGATGAAAATGGAGAAGGAATTACCCTTAGAAGAATGCTAGCTCTCTCAACATTCAATTGTATGGCACAGGACATTTGCATTTTGGCAGAGGAATTGATGGGAGCTCTTATCATACTGCCATTCCACAAGAGCCAGCGTGCAGATGGGTCGTTGACTGAGGCCCATGCAGGTTTCCACTATGTAAACCGCAAGGTTCTAAGGAATGCCCCTTGCTCTGTGGGAATCCTAGTGGATCGAGGTCTTGGATCAGTAGAGAAAATTTCAAGGTCGTATGTATCTCAGAATGTGGCAGTCATCTTCATTGGCGGTAAAGACGACCGAGAAGCATTAGCCTACGCTGGTCGCGTTGCAAGGCATCCTGGAGTTAAACTCTCTGTGATTAGATTCTTGGTGGATGCTGAGGCAGAAAATGCTGCAAGAAGAGCTGGGACTTACAGGATAAGTGCCGCTGAGCAGGAAGAGGAACTGAGACTAGATGATGAAAGCTTTGCTTACTTTTACGAACGGCATGTGGCTGGGGGGCACGTTGCTTACGTTGAAAAACACCTTGCCAGTTCCTCCGAGACGTACTCTACTTTGAAATCATTAGAAGGACAATATGCACTCATAATCGTCGGTCGAGGTGGGAAGGCGAACTCGGTGTTAACTTTTGGGATGAATGACTGGCAACAATGTCCAGAACTAGGTCCTATAGGGGATGTTCTTTCCGGGTCTGAATTCTCTGTTAGGACCTCAGTTTTGATCATCCAACAACACAATCTAAAAGGAGAGCTAGATGGACTTGATGATGATTTTTCGATTATGTAA 2373 44.5 MARTRVYEPSRSLESDTCTIRLTEIFGRATRSILGFFLMVGLCNGVHYLMRPFSQPRISSDTIVGLVIGSFIRKHLDLSTVRTLRYIVDFGMVCYMFVLGLEMDPYVLFKAPTRDAKVAYAGMISTLILACSITPFISLSKTKELSFILSLSTVLSSTASPVLTRLITCLKIGKSDIGRLVIAAGMHADFISTIIICIGYLFCKCQETRISLIKGFQLGIVLLIQTILAAKVSPAFMNWVNNENPEGKPMKGPHLVLAVAFMAFLCSCPTIFGYNPILSAFLAGTFLPREGRVSRWAIGKINYLLSTIFYPIFFVWMGVESRLADFEPGQIMTWVRLLLLFAIATVGKVVGTVISGAILGFHWPESVALGLLLTMKGHFHIYLAIAAKTAGKTTTSTSLVMVIVIFFTIVHAPNVVAHIIKRARKRTPTHRMSLQLLDPSSELKILLCIHGPQNTTAALNIMEISRGTAKPGVVVYVTDMIELTDEIAATLVQGEGVDTLTVTHTGVTQIRDQVTAAVQSYVDENGEGITLRRMLALSTFNCMAQDICILAEELMGALIILPFHKSQRADGSLTEAHAGFHYVNRKVLRNAPCSVGILVDRGLGSVEKISRSYVSQNVAVIFIGGKDDREALAYAGRVARHPGVKLSVIRFLVDAEAENAARRAGTYRISAAEQEEELRLDDESFAYFYERHVAGGHVAYVEKHLASSSETYSTLKSLEGQYALIIVGRGGKANSVLTFGMNDWQQCPELGPIGDVLSGSEFSVRTSVLIIQQHNLKGELDGLDDDFSIM 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4541755 4545992 - Tan0019988.1 Tan06g0598 755302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0598 790 FunFam Cation/H(+) antiporter 28 30 429 - -
Tan06g0598 790 Gene3D - 443 743 - -
Tan06g0598 790 PANTHER CATION/H + ANTIPORTER 36 775 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Tan06g0598 790 Gene3D - 29 429 IPR038770 -
Tan06g0598 790 Pfam Sodium/hydrogen exchanger family 49 419 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0598 Tan-Chr6:4541755 Tan07g0862 Tan-Chr7:14615747 1.60E-98 dispersed
Tan06g0598 Tan-Chr6:4541755 Tan05g0529 Tan-Chr5:3672564 2.10E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0598 K26731 - csv:101211645 1410.59