Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0628 ATGGCGGAATCCGAGCGTCGCGCGAAACGCCCTAGAATTACGAGGGGGGAAGATGATTATATGCCTGGAAGTATAATTGAGATTGAGCTTCATAACTTTATGACCTTCAACCACTTGAAATGTAAACCAGGATCACGTCTGAACCTTGTAATTGGGCCCAATGGATCTGGTAAAAGCTCTATTGTATGTGCTATTGCCCTTGGCCTTGGTGGTGAGCCTCAGCTCCTTGGAAGGGCGACCACTGTTGGAGCATATGTGAAGCGTGGGGAGGAGTCTGGTCATGTTAGAATAACCTTGAGAGGGAATACTAAAGAGGAGAAGATTATGATTACACGTAAAATGGACACACATAACAAATCTGAGTGGTTGTTCAATGGAAAAATTGTGCCAAAGAAAGATGTAGCCGCAATCATTCAAAGGTTTAACATCCAAGTTAATAATTTGACTCAATTTTTACCTCAGGACAGGGTTTGTGAGTTTGCCAAATTAACTCCTGTGCAACTTTTAGAAGAGACTGAAAAGGCAGTTGGTGATCCTCAACTTCCAATCCTACATCATGCACTTGTTGAGAAAAGCCATGACATAAAAAATATAGAGCGAGCTGTTGAGAAAAATGGAGACACCCTAGATCAGCTGAAGGCATTAAATGCCGAGCAGGAGAAAGATGTTGAGCGTGTTCGTCAAAGAGATGAACTTTTGAAAAAGGTTGAGTCCATGAGAAAGAAACTGCCATGGCTGAAGTATGACATGAAAAAGGCTGAATACATGGAAGTTAAGGAAAAGGAAAAGGAGGCCAAAAAGAAGTTGGATGAAGCTGCTAACACTTTGAATGAATTAAAGGAGCCAATTGAGAAGCAAAAAAAGGAGAAGGCAATGTTGGATGCTAAAACTAAAAAGTATAGCACTCTCATTAATGACAATCACAGGAAAAGGATGGAACTTCAGGAAACTGAAAACCGTTTGGGGGTACAAGTGCAAGGAAAATTTAAAGAAATGGAAGACTTAAGGAAACAAGAAGAATCTTGTCAACAGAGAATCTTACAAGCTAAAGAAGAACTCGAAGCTGCTGAATTGGAACTTCAGAATTTGCCTCCTTACGAACATCCCAAGGATGAGATTGAACGGTTGCGTGCTCAAATTTTGGAGCTGGAAGTTTCTGCAAGTCAGAAGAGACTAATGAAGTCAGATATTGAAAAAAATATATCCCAAAAAAGAAATACTTTGAGGCAATGCTTGGATAGGTTAAAGGATATGGAGAATACTAATACAAAACTACTACAGGCATTGAGGAATTCTGGAACAGAGAAGATTTTTGAAGCTTATCACTGGCTTCAAGAACATCGCCATGAGTTCAAGAAGGAGGTGTATGGACCAGTGTTACTAGAGGTTAATGTATCAAATCGGACTCACGCTGACTACTTAGAAGGTCATATCCCATCCTACGTATGGAAGTCCTTCATAACACAAGATTCTGATGATCGTGACATTATGGTAAAAAACTTGGGTTCATTTGGTGTTCCCATCTTAAACTATGTGGGAGGCGAAAGGCGCACAAATCAACATTTTGAGGTTTCTGAGGAGGTTCGTGCATTTGGCATATATTCCCGGCTAGACCAAATTTTTGATGCTCCTCCAGCTGTAAAGGAGGTTTTGACCATGCAGTTTGGTTTGGAACATTCATATATTGGTTCAAAGGTAACTGATCAGAAGGCAGATGAGGTCTCAAAATTGGGAATTTTGGATTTTTGGACTCCAGATAATCATTATCGATGGTCTCGCTCTAGATATGGTGGTCATATGTCTGGAAGTGTGGAGCCAGTTGATCGCTCACGTCTTCTTTTGTGCAACTTGGATGCGGGAGAAATTGATGGCCTTCGTTCCAGGAAAAATGAGCTAGAAGAATCTGTTTCTGCCTTAGAAGATAACTGTAAATCATGTCAGAATGAGCTAAGATTGATAGAGGATGAAGAAGCTAAACTTCGCAAACATCGGGATGACATTTTAAATACTGTGCAACATGAGAAGAGAAAACGCCGGGAAATGGAAAATCGCATTGATCAAAGGAAAAAGAAATTAGAATCTATGGAGAGGGAAGATGACCTGGATACTGTTGTGGCTAAGCTTGTCGACCAAGCTGCAAATTTTAACATTCAAAGGTTCCATTGTGCAATTGAAATTAAGAATTTGCTTGTTGAGGCCGTTTCTTATAGACAGAGCTTGACTAAGAACCATATGTCCGCGATTGAAATTGAAGCAAAGATCAGAGAATTGGAGGTAAATCTGAAGCAGCATGAGAAGTTTGCTCTGCAAGCATCAGTGCAGTTCGAGTACTGCAAGAAAGAAGTTGAGGACTATCGACAGCAACTTTCAGTTGCCAAGAAGCATGCAGAATCTATTGCTGTGATCACACGTGATCTCGAGAAGGAATTTCTTGAGATGCCTACTACAATTGAGGAACTGGAGGCCGCTATTCAAGATAATATTTCGCAAGCTAATTCCATTCTATTCTTAAACCATAATGTGCTTGAGGAATATGAACATCGTCAGCGTCAGATAAATACCATTGCACGAAAACTAGAAGCTGATAAACATGAACTAAGGAAGTGTATGGCTGAAGTTGATGAGCTGAAGGGAAATTGGCTCCCAACATTAAGAAGACTTGTTTCTCAGATAAATGAGACTTTTAGTCGCAATTTTCAAGAGATGGCTGTTGCTGGAGAAGTGTTATTGGATGAACATGATATGGACTTCGATCAATTTGGGATACTTATTAAAGTGAAGTTCAGGTGA 2790 40.22 MAESERRAKRPRITRGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATTVGAYVKRGEESGHVRITLRGNTKEEKIMITRKMDTHNKSEWLFNGKIVPKKDVAAIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHHALVEKSHDIKNIERAVEKNGDTLDQLKALNAEQEKDVERVRQRDELLKKVESMRKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNELKEPIEKQKKEKAMLDAKTKKYSTLINDNHRKRMELQETENRLGVQVQGKFKEMEDLRKQEESCQQRILQAKEELEAAELELQNLPPYEHPKDEIERLRAQILELEVSASQKRLMKSDIEKNISQKRNTLRQCLDRLKDMENTNTKLLQALRNSGTEKIFEAYHWLQEHRHEFKKEVYGPVLLEVNVSNRTHADYLEGHIPSYVWKSFITQDSDDRDIMVKNLGSFGVPILNYVGGERRTNQHFEVSEEVRAFGIYSRLDQIFDAPPAVKEVLTMQFGLEHSYIGSKVTDQKADEVSKLGILDFWTPDNHYRWSRSRYGGHMSGSVEPVDRSRLLLCNLDAGEIDGLRSRKNELEESVSALEDNCKSCQNELRLIEDEEAKLRKHRDDILNTVQHEKRKRREMENRIDQRKKKLESMEREDDLDTVVAKLVDQAANFNIQRFHCAIEIKNLLVEAVSYRQSLTKNHMSAIEIEAKIRELEVNLKQHEKFALQASVQFEYCKKEVEDYRQQLSVAKKHAESIAVITRDLEKEFLEMPTTIEELEAAIQDNISQANSILFLNHNVLEEYEHRQRQINTIARKLEADKHELRKCMAEVDELKGNWLPTLRRLVSQINETFSRNFQEMAVAGEVLLDEHDMDFDQFGILIKVKFR 929
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4768270 4789231 + Tan0010442.3 Tan06g0628 755332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0628 929 Coils Coil 622 698 - -
Tan06g0628 929 Gene3D - 24 216 IPR027417 -
Tan06g0628 929 Coils Coil 195 229 - -
Tan06g0628 929 Pfam AAA domain 28 282 IPR038729 GO:0006302(InterPro)|GO:0016887(InterPro)
Tan06g0628 929 Coils Coil 401 428 - -
Tan06g0628 929 Coils Coil 248 289 - -
Tan06g0628 929 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 356 IPR027417 -
Tan06g0628 929 Coils Coil 332 359 - -
Tan06g0628 929 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 929 IPR027131 GO:0000724(PANTHER)|GO:0000724(InterPro)|GO:0003697(PANTHER)|GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0006281(InterPro)|GO:0016887(InterPro)|GO:0030915(PANTHER)|GO:0030915(InterPro)
Tan06g0628 929 Coils Coil 747 767 - -
Tan06g0628 929 Coils Coil 842 879 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0627 Tan-Chr6:4768270 Tan06g0628 Tan-Chr6:4768270 0.00E+00 tandem
Tan06g0628 Tan-Chr6:4768270 Tan06g0629 Tan-Chr6:4768270 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0628 K22803 - csv:101210248 1704.49