Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0629 ATGGCGGAATCCGAGCGTCGCGCGAAACGCCCTAGAATTACGAGGGGGGAAGATGATTATATGCCTGGAAGTATAATTGAGATTGAGCTTCATAACTTTATGACCTTCAACCACTTGAAATGTAAACCAGGATCACGTCTGAACCTTGTAATTGGGCCCAATGGATCTGGTAAAAGCTCTATTGTATGTGCTATTGCCCTTGGCCTTGGTGGTGAGCCTCAGCTCCTTGGAAGGGCGACCACTGTTGGAGCATATGTGAAGCGTGGGGAGGAGTCTGGTCATGTTAGAATAACCTTGAGAGGGAATACTAAAGAGGAGAAGATTATGATTACACGTAAAATGGACACACATAACAAATCTGAGTGGTTGTTCAATGGAAAAATTGTGCCAAAGAAAGATGTAGCCGCAATCATTCAAAGGTTTAACATCCAAGTTAATAATTTGACTCAATTTTTACCTCAGGACAGGGTTTGTGAGTTTGCCAAATTAACTCCTGTGCAACTTTTAGAAGAGACTGAAAAGGCAGTTGGTGATCCTCAACTTCCAATCCTACATCATGCACTTGTTGAGAAAAGCCATGACATAAAAAATATAGAGCGAGCTGTTGAGAAAAATGGAGACACCCTAGATCAGCTGAAGGCATTAAATGCCGAGCAGGAGAAAGATGTTGAGCGTGTTCGTCAAAGAGATGAACTTTTGAAAAAGGTTGAGTCCATGAGAAAGAAACTGCCATGGCTGAAGTATGACATGAAAAAGGCTGAATACATGGAAGTTAAGGAAAAGGAAAAGGAGGCCAAAAAGAAGTTGGATGAAGCTGCTAACACTTTGAATGAATTAAAGGAGCCAATTGAGAAGCAAAAAAAGGAGAAGGCAATGTTGGATGCTAAAACTAAAAAGTATAGCACTCTCATTAATGACAATCACAGGAAAAGGATGGAACTTCAGGAAACTGAAAACCGTTTGGGGGTACAAGTGCAAGGAAAATTTAAAGAAATGGAAGACTTAAGGAAACAAGAAGAATCTTGTCAACAGAGAATCTTACAAGCTAAAGAAGAACTCGAAGCTGCTGAATTGGAACTTCAGAATTTGCCTCCTTACGAACATCCCAAGGATGAGATTGAACGGTTGCGTGCTCAAATTTTGGAGCTGGAAGTTTCTGCAAGTCAGAAGAGACTAATGAAGTCAGATATTGAAAAAAATATATCCCAAAAAAGAAATACTTTGAGGCAATGCTTGGATAGGTTAAAGGATATGGAGAATACTAATACAAAACTACTACAGGCATTGAGGAATTCTGGAACAGAGAAGATTTTTGAAGCTTATCACTGGCTTCAAGAACATCGCCATGAGTTCAAGAAGGAGGTGTATGGACCAGTGTTACTAGAGGTTAATGTATCAAATCGGACTCACGCTGACTACTTAGAAGGTCATATCCCATCCTACGTATGGAAGTCCTTCATAACACAAGATTCTGATGATCGTGACATTATGGTAAAAAACTTGGGTTCATTTGGTGTTCCCATCTTAAACTATGTGGGAGGCGAAAGGCGCACAAATCAACATTTTGAGGTTTCTGAGGAGGTTCGTGCATTTGGCATATATTCCCGGCTAGACCAAATTTTTGATGCTCCTCCAGCTGTAAAGGAGGTTTTGACCATGCAGTTTGGTTTGGAACATTCATATATTGGTTCAAAGGTAACTGATCAGAAGGCAGATGAGGTCTCAAAATTGGGAATTTTGGATTTTTGGACTCCAGATAATCATTATCGATGGTCTCGCTCTAGATATGGTGGTCATATGTCTGGAAGTGTGGAGCCAGTTGATCGCTCACGTCTTCTTTTGTGCAACTTGGATGCGGGAGAAATTGATGGCCTTCGTTCCAGGAAAAATGAGCTAGAAGAATCTGTTTCTGCCTTAGAAGATAACTGTAAATCATGTCAGAATGAGCTAAGATTGATAGAGGATGAAGAAGCTAAACTTCGCAAACATCGGGATGACATTTTAAATACTGTGCAACATGAGAAGAGAAAACGCCGGGAAATGGAAAATCGCATTGATCAAAGGAAAAAGAAATTAGAATCTATGGAGAGGGAAGATGACCTGGATACTGTTGTGGCTAAGCTTGTCGACCAAGCTGCAAATTTTAACATTCAAAGGTTCCATTGTGCAATTGAAATTAAGAATTTGCTTGTTGAGGCCGTTTCTTATAGACAGAGCTTGACTAAGAACCATATGTCCGCGATTGAAATTGAAGCAAAGATCAGAGAATTGGAGGTAAATCTGAAGCAGCATGAGAAGTTTGCTCTGCAAGCATCAGTGCAGTTCGAGTACTGCAAGAAAGAAGTTGAGGACTATCGACAGCAACTTTCAGTTGCCAAGAAGCATGCAGAATCTATTGCTGTGATCACACGTGATCTCGAGAAGGAATTTCTTGAGATGCCTACTACAATTGAGGAACTGGAGGCCGCTATTCAAGATAATATTTCGCAAGCTAATTCCATTCTATTCTTAAACCATAATGTGCTTGAGGAATATGAACATCGTCAGCGTCAGATAAATACCATTGCACGAAAACTAGAAGCTGATAAACATGAACTAAGGAAGTGTATGGCTGAAGTTGATGAGCTGAAGGGAAATTGGCTCCCAACATTAAGAAGACTTGTTTCTCAGATAAATGAGACTTTTAGTCGCAATTTTCAAGAGATGGCTGTTGCTGGAGAAGTGTTATTGGATGAACATGATATGGACTTCGATCAATTTGGGATACTTATTAAAGTGAAGTTCAGACAAGCAGGTCAGCTTCAGGTTCTCAGTGCACATCATCAATCCGGAGGGGAACGCTCGGTATCGACAATTCTGTATCTTGTTTCCCTTCAAGACCTTACCAACTGCCCATTTAGAGTAGTTGACGAGATAAACCAAGGTACTAGCCATCCGAATATCGTGTACTGGCACAAACAAGTGATATGA 2970 40.54 MAESERRAKRPRITRGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATTVGAYVKRGEESGHVRITLRGNTKEEKIMITRKMDTHNKSEWLFNGKIVPKKDVAAIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHHALVEKSHDIKNIERAVEKNGDTLDQLKALNAEQEKDVERVRQRDELLKKVESMRKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNELKEPIEKQKKEKAMLDAKTKKYSTLINDNHRKRMELQETENRLGVQVQGKFKEMEDLRKQEESCQQRILQAKEELEAAELELQNLPPYEHPKDEIERLRAQILELEVSASQKRLMKSDIEKNISQKRNTLRQCLDRLKDMENTNTKLLQALRNSGTEKIFEAYHWLQEHRHEFKKEVYGPVLLEVNVSNRTHADYLEGHIPSYVWKSFITQDSDDRDIMVKNLGSFGVPILNYVGGERRTNQHFEVSEEVRAFGIYSRLDQIFDAPPAVKEVLTMQFGLEHSYIGSKVTDQKADEVSKLGILDFWTPDNHYRWSRSRYGGHMSGSVEPVDRSRLLLCNLDAGEIDGLRSRKNELEESVSALEDNCKSCQNELRLIEDEEAKLRKHRDDILNTVQHEKRKRREMENRIDQRKKKLESMEREDDLDTVVAKLVDQAANFNIQRFHCAIEIKNLLVEAVSYRQSLTKNHMSAIEIEAKIRELEVNLKQHEKFALQASVQFEYCKKEVEDYRQQLSVAKKHAESIAVITRDLEKEFLEMPTTIEELEAAIQDNISQANSILFLNHNVLEEYEHRQRQINTIARKLEADKHELRKCMAEVDELKGNWLPTLRRLVSQINETFSRNFQEMAVAGEVLLDEHDMDFDQFGILIKVKFRQAGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGTSHPNIVYWHKQVI 989
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4768270 4789231 + Tan0010442.4 Tan06g0629 755333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0629 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 975 IPR027417 -
Tan06g0629 989 Pfam RecF/RecN/SMC N terminal domain 25 973 IPR003395 -
Tan06g0629 989 Coils Coil 248 289 - -
Tan06g0629 989 Coils Coil 332 359 - -
Tan06g0629 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 252 IPR027417 -
Tan06g0629 989 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 975 IPR027131 GO:0000724(PANTHER)|GO:0000724(InterPro)|GO:0003697(PANTHER)|GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0006281(InterPro)|GO:0016887(InterPro)|GO:0030915(PANTHER)|GO:0030915(InterPro)
Tan06g0629 989 Coils Coil 747 767 - -
Tan06g0629 989 Coils Coil 842 879 - -
Tan06g0629 989 Coils Coil 622 698 - -
Tan06g0629 989 Gene3D - 847 982 IPR027417 -
Tan06g0629 989 Coils Coil 195 229 - -
Tan06g0629 989 Gene3D - 24 218 IPR027417 -
Tan06g0629 989 Coils Coil 401 428 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0626 Tan-Chr6:4768270 Tan06g0629 Tan-Chr6:4768270 0.00E+00 dispersed
Tan06g0627 Tan-Chr6:4768270 Tan06g0629 Tan-Chr6:4768270 0.00E+00 dispersed
Tan06g0628 Tan-Chr6:4768270 Tan06g0629 Tan-Chr6:4768270 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0629 K22803 - csv:101210248 1793.09