Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0672 ATGGACGATAGCTGCGCGGTCTGTGCCGATACTCTTGAATGGGTTGCCTATGGGTCTTGTGGACATCGGGATGTCTGCTCCACCTGCGTTGCTCGTCTTCGATTCATTTGCGGTGATCGCCGCTGTTGCATCTGCAAGTCGGAATCCGCCGTCGTGTTTGTCACTAAGGCCTTAGGAGATTATACAAGGACGATTAACGACTTCACAGTCTTTCCTTCTGAACCAAGAGAAGGTCGTAGTGGATCCTATTGGTATCATGAAGACACACAAGCATTTTTTGATGATGTTGACCACTACAAGATGATAAAAGCTATGTGCAGGTTATCCTGCAGTGTGTGTGATAAGATAGGTGAAGATCAACCAAATGATGGCTCAAAGCGCCGAGGAAGATTTCGGAACATTGAGCAGCTAAAGGGTCATTTGTTTCATCGACATAAGTTGTTTATGTGCAGCCTATGTTTGGAAGGAAGGAAGGTCTTTATTTGTGAACAAAAGCTATATAATAGAGCACAATTGAATCAGCATATACACACTGGTGACTCTGAGGTGGACGGAAGTGAGAGTGAGAGAGGTGGTTTCACTGGGCACCCTATGTGTGAATTTTGCAGAACTCCTTTTTATGGAGATAATGAGCTATATACTCATATGTCGACTGAGCATTATACATGTCATATATGTCAAAGGCTCCATCCTGGACAGTATGAATACTATAAGAATTATGATGATCTGGAGATCCATTTCCGACAAGCACATTTTCTTTGTGAAGATGAAGCCTGCCTTTCTAAAAAGTTTATAGTGTTCCAATCTGAAGCAGAGATGAAGAGGCATAATACTATTGAACATGGTGGCAAGCTATCTCGATCAAAGCGAAATGCTGCTTTGCAGATACCAACCAGTTTCCGATATCGAAGAAGTAATGAGCAAGATAATCGCCGTGGTAGACGGACATTTCGTCGTGATTCTTCTGATGATCTACTTTCTTTAGCCATTCAAGCAAGTTTCGAAGCAGCCAATGTTGATGATACTGATCGTGATCCATTACCGAGTGGACAAGTAGGCTCGGATCAGGGAAATACAAGCAACGTTGATCCCTTAATCGAACCATTTGAATCATTATCAACAACAGATCCCGAATCAGCTTCTAGATACCTTCAAGCCTTGAGCCACTCTACGAATTCCCAATTGGAGCAATCATCTTTTCCACCACTTTCTATGGCACCTAGCAGCAGTCATCAGAAGTCCATGCATGACAAAGATGCTATACACAATAACAGTATGGCAGCTCATCTTCGCCGCCAGAGGAATGTGACTGTTTTGAATTCGGCTCAAGGTTGGCCAAAATCAAGTCGTGCCCCTGTGCTACCATCAAATAATTCATCTCAAGCTTGGCCTGCAATAAATGTTAATCATCCAGCATCAAGCAGTTCTGGGCAGATTAAGGGTGTTGTCACCATCAGTAATGGCCCTTCACCTTCAGTCTCTGGTTACTCAAATGCAACTCAGATGCATGCAAAAGGTCGATCTAGTTCATCAAGTGGATCAGGTAGTAGCAGTAGGATCAGCCACTCTGCTTCTGCTCCCAGCCTCACCAACATGGCCTACACTGAACCCTCCGTTAATGATTTCCCACCAGTTTCTGCAGTGGCACAGGCACGTAAGGTGCCCTCAAGTAACCAAAGTGCAGTAAACGTGGAAGACGTCCAAACAGCAAACAAATCTCTGGTTGAAAAGATACGGGCTGCTCTTGATTTTGACCAAGATAGATATGCAGTCTTTAAAGATATATCTGCACAATATCGTCAGGGTCAGATTGACACAGAAATGTATCTAGACTGTGTTCAGCAGTTTGGTTTGTCGCATCTTGTGCTAGAGTTGGCTAGGCTCTGTCCTGATGCTCGGAAACAGAGAGAACTTGTGGAGACCTATAATTCTAGTTTACATAAAGATGTGATCCAAGAAAATGGTAGGGCTCGAGATGGTATTCAATTGAAAGACAAAAGTAAGGGAAAGAAAGGCAAAGGGAAGTTTGTGGAAGTTAAAGACAGCAGTTCCAAGGACAAATTAGCCGACAGTATCTTGAGTAGTGTTCGGGAACTGCAGTCAAGTTTCAGGTCATCGGAGGAAAATGTAGAGGTATTATCAAAGGGTGAGTACCGTGCTGCGAAAGGGAAATCGAAGATATCATCTGAAAACCAGCAAGGTGGGACAGGAGGTGGGACAGGAGGCCAAAACAGTCAACCATCTACTGGTCTATCGAACCAAAGCACTGGGGATGGGGGTGGGGGGAGCAAGCAGAAAAAGAAAACCTCCAAGTTCCATAGAGTTCGTTTAGGTGATGGTTCAGTCGCTGCACTTTTAGATTTAAAGAACTCCAATCCCGAACCGGACCCAGTAGAAGGAGAACAGGACAGGAACAATGCAGGGGCATTGCCTGTTCGGGGCGTCTGGAGAAATGGTGCTCACAGGCTTTTCTCCTAG 2478 44.51 MDDSCAVCADTLEWVAYGSCGHRDVCSTCVARLRFICGDRRCCICKSESAVVFVTKALGDYTRTINDFTVFPSEPREGRSGSYWYHEDTQAFFDDVDHYKMIKAMCRLSCSVCDKIGEDQPNDGSKRRGRFRNIEQLKGHLFHRHKLFMCSLCLEGRKVFICEQKLYNRAQLNQHIHTGDSEVDGSESERGGFTGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRLHPGQYEYYKNYDDLEIHFRQAHFLCEDEACLSKKFIVFQSEAEMKRHNTIEHGGKLSRSKRNAALQIPTSFRYRRSNEQDNRRGRRTFRRDSSDDLLSLAIQASFEAANVDDTDRDPLPSGQVGSDQGNTSNVDPLIEPFESLSTTDPESASRYLQALSHSTNSQLEQSSFPPLSMAPSSSHQKSMHDKDAIHNNSMAAHLRRQRNVTVLNSAQGWPKSSRAPVLPSNNSSQAWPAINVNHPASSSSGQIKGVVTISNGPSPSVSGYSNATQMHAKGRSSSSSGSGSSSRISHSASAPSLTNMAYTEPSVNDFPPVSAVAQARKVPSSNQSAVNVEDVQTANKSLVEKIRAALDFDQDRYAVFKDISAQYRQGQIDTEMYLDCVQQFGLSHLVLELARLCPDARKQRELVETYNSSLHKDVIQENGRARDGIQLKDKSKGKKGKGKFVEVKDSSSKDKLADSILSSVRELQSSFRSSEENVEVLSKGEYRAAKGKSKISSENQQGGTGGGTGGQNSQPSTGLSNQSTGDGGGGSKQKKKTSKFHRVRLGDGSVAALLDLKNSNPEPDPVEGEQDRNNAGALPVRGVWRNGAHRLFS 825
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5083399 5088970 - Tan0022811.1 Tan06g0672 755376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0672 825 MobiDBLite consensus disorder prediction 651 680 - -
Tan06g0672 825 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Tan06g0672 825 PANTHER ZINC FINGER PROTEIN 598 1 819 IPR044288 GO:0016567(PANTHER)|GO:0043022(PANTHER)|GO:0061630(PANTHER)|GO:0061630(InterPro)|GO:0072344(InterPro)|GO:0072344(PANTHER)
Tan06g0672 825 MobiDBLite consensus disorder prediction 349 411 - -
Tan06g0672 825 SMART c2h2final6 108 145 IPR013087 -
Tan06g0672 825 SMART c2h2final6 197 220 IPR013087 -
Tan06g0672 825 SMART c2h2final6 252 281 IPR013087 -
Tan06g0672 825 SMART c2h2final6 221 251 IPR013087 -
Tan06g0672 825 MobiDBLite consensus disorder prediction 337 417 - -
Tan06g0672 825 MobiDBLite consensus disorder prediction 650 680 - -
Tan06g0672 825 CDD RING-HC_ZNF598 3 53 IPR041888 -
Tan06g0672 825 MobiDBLite consensus disorder prediction 719 825 - -
Tan06g0672 825 MobiDBLite consensus disorder prediction 444 524 - -
Tan06g0672 825 MobiDBLite consensus disorder prediction 725 763 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0672 K22381 - csv:101214376 1379.77