Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0677 ATGGCTTCTTCTTCCCAAAAGATCAAACTTCTCTCGAAGTTCTCATGCATCATCTTCTTCCTCTATCTCTCCACTTTTTCTTCTGCAAACCTAGAAGTGGGTTTCTATGAATCATCTTGCCCTGATGCCGAGTCCATTATCAAGAATGCTGTAGATAAAGCTGTCTCTCGGAACCCCGGCATCGCTGCCGGGCTCATCAGAATGCATTTCCATGACTGTTTCGTTAGGGGTTGCGATGGTTCTGTTCTACTAAAATCCACTCCCGAAAACCCAGCTGAAAGAGACCATCGAGCGAACTTCCCAAGCTTACGAGGTTTCGAAGTTATTGACGAAGCCAAGGCCCAAATCGAGGCCGTTTGTCCCAACACCGTGTCGTGCGCCGATATTCTCGCCTTCGCAGCTCGCGACAGCGCCTGTAAAGTCGGAGGCATCAACTACGCCGTGCCAGCAGGCCGCCGTGACGGTCGCATTTCAATTAAAGAAGAAGCTAACAGTCTCCCTCCTCCCTCTTTCAACGCTCAGAATCTCACTAATAGCTTCTCCCAACGAGGGCTGTCGGCGGCGGAGATGGTGACTCTCTCCGGCGCCCACTCCATCGGAGTAGCCCACTGCCCCACTTTCTCTAACAGGCTATATTCCTTCAACGCAACTCACTCACAAGACCCTTCCATGGACCCCAACTACGCAGCTTACTTGAAGACCAAATGCCCGCCGCCGAGTAGCTCCGGCAGTGAGCAGTCGGCGGCGCCGCTTGAGTTTTCCACCCCCAATCGTCTCGACAATCGGTACTACATTGAGTTGAAGAACCACCGTGGGGTGTTGAGCTCCGATCAGACGTTGTTGAGCAGCTCTTCCACCTCGAGAATGGTGTTGGAGAATGCCAAGCATGGCTACAAATGGGCTAATGAGTTTGGGAAGGCGATGGTTAAAATGGGTTCCATTGACGTCCTCACAGGATCGAAAGGTGAGATCAGACGCCATTGTAGTGTTGTGAATTATTGA 1002 51.6 MASSSQKIKLLSKFSCIIFFLYLSTFSSANLEVGFYESSCPDAESIIKNAVDKAVSRNPGIAAGLIRMHFHDCFVRGCDGSVLLKSTPENPAERDHRANFPSLRGFEVIDEAKAQIEAVCPNTVSCADILAFAARDSACKVGGINYAVPAGRRDGRISIKEEANSLPPPSFNAQNLTNSFSQRGLSAAEMVTLSGAHSIGVAHCPTFSNRLYSFNATHSQDPSMDPNYAAYLKTKCPPPSSSGSEQSAAPLEFSTPNRLDNRYYIELKNHRGVLSSDQTLLSSSSTSRMVLENAKHGYKWANEFGKAMVKMGSIDVLTGSKGEIRRHCSVVNY 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5111292 5113325 + Tan0017141.1 Tan06g0677 755381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0677 333 FunFam Peroxidase 167 311 - -
Tan06g0677 333 Pfam Peroxidase 48 294 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g0677 333 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g0677 333 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g0677 333 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g0677 333 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g0677 333 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g0677 333 ProSiteProfiles Plant heme peroxidase family profile. 30 332 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g0677 333 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601(InterPro)
Tan06g0677 333 PANTHER PEROXIDASE 25-RELATED 25 328 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Tan06g0677 333 Gene3D - 34 332 - -
Tan06g0677 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Tan06g0677 333 CDD secretory_peroxidase 30 331 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan06g0677 333 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g0677 333 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g0677 333 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g0677 333 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g0677 333 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g0677 333 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g0677 333 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g0677 333 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g0677 333 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan06g0677 333 FunFam Peroxidase 34 175 - -
Tan06g0677 333 Gene3D Peroxidase, domain 2 167 311 - -
Tan06g0677 333 SUPERFAMILY Heme-dependent peroxidases 30 332 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0044 Tan-Chr3:5475765 Tan06g0677 Tan-Chr6:5111292 2.60E-68 dispersed
Tan05g0860 Tan-Chr5:6743085 Tan06g0677 Tan-Chr6:5111292 2.00E-71 dispersed
Tan06g0677 Tan-Chr6:5111292 Tan06g0679 Tan-Chr6:5127660 9.40E-146 dispersed
Tan06g0677 Tan-Chr6:5111292 Tan06g0678 Tan-Chr6:5118486 7.20E-06 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0677 K00430 - csv:101215736 527.709