Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0689 ATGGTGGCTGAAGCTGAGGTTGTTGTTTGTTCGAAGAGCCTCCCTGTTTTGGAGGTGCCGTATTTCGGTAAAGAGACTCATCTTGTTGATGAAATTAAGTCCATCGATGGTGGGATTCCGATTGATCCGACTCTCGATCGTGTTCGTGTTTCCGAATCAGTTTGTTCGAGCTCTCAATCGGATATGAAGAAAAATCCAGATTCCGACATCGATTTGGCAAACGGTAGGGAATTTCCGAGTCTCCGGTCAGGGAGCTTTGCTGATATTGGACCGAGGAGATACATGGAAGATGAACATATAAGGATAGATGATCTGTGTTCACATTTAGGATCGCTCTTTAAGTTTCCTAAGCCAAGTGGCTTCTATGGGGTGTTTGATGGACATGGAGGACCCGAAGCAGCAGCTTATATCAGAAAGAATGTTCTTAGACTCTTTTTTGAGGATGTTAGGTTTCCTCAAATGCCTGATGTTGATGAAGTCTTGCCGGAGGAGATTGAAAATTCCCTCCGAAAAGCATTTCTTCTGGCTGATCAAGCTCTGGCTGATGATTCCGGTGTCAGTAATTCGTCTGGGACGACAGCCCTGACTGCTCTTGTGCTTGGAAGGCTTTTAATGGTGGCTAATGTTGGAGATTGCCGGGCTGTTCTCAGTCGGAACGGAGAGGCAGTAGATATGTCTCAAGACCACCGGCCAATTTATTCTCCGGAGAAGCAACGGGTGGAAGAGTTGGGTGGCTTCGTTGATGGTGGTTATCTTAATGGTGTTCTATCGGTTTCCAGGGCCTTGGGGGATTGGGACATGAAGCTCCCCCATGGTTCTCCTTCACCTCTCATTGCAGAACCAGAATGCAGGCAGATTGTTCTAACAGAGGAGGATGAGTTCTTGATCATAGCTTGCGACGGGATTTGGGATGTGATGTCGAGCCAACAAGCAATTGATGTAGTTCGACGGGGACTTCAGCGACATGACGACCCTGAGCGATGTGCTCGAGATCTTGTCCTGCAGGCTTTGCGGTTGGACTCATTCGATAATCTCACTGTTGTTATTGTTTGTTTCTCTAGTTTCCATTGCGACAACCCTCTACTGCCACAACAGCGAAAATTGAGATACTGCAGTCTCTCTGCACAGGCCCTTTGTAGCTTGCAGAGATGGTTGGATAAGAGTGGATGCCAATGA 1176 47.28 MVAEAEVVVCSKSLPVLEVPYFGKETHLVDEIKSIDGGIPIDPTLDRVRVSESVCSSSQSDMKKNPDSDIDLANGREFPSLRSGSFADIGPRRYMEDEHIRIDDLCSHLGSLFKFPKPSGFYGVFDGHGGPEAAAYIRKNVLRLFFEDVRFPQMPDVDEVLPEEIENSLRKAFLLADQALADDSGVSNSSGTTALTALVLGRLLMVANVGDCRAVLSRNGEAVDMSQDHRPIYSPEKQRVEELGGFVDGGYLNGVLSVSRALGDWDMKLPHGSPSPLIAEPECRQIVLTEEDEFLIIACDGIWDVMSSQQAIDVVRRGLQRHDDPERCARDLVLQALRLDSFDNLTVVIVCFSSFHCDNPLLPQQRKLRYCSLSAQALCSLQRWLDKSGCQ 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5245633 5247505 - Tan0002229.1 Tan06g0689 755393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0689 391 Pfam Protein phosphatase 2C 92 344 IPR001932 -
Tan06g0689 391 PANTHER PROTEIN PHOSPHATASE 2C 66 352 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Tan06g0689 391 FunFam Probable protein phosphatase 2C 22 68 355 - -
Tan06g0689 391 CDD PP2Cc 82 352 IPR001932 -
Tan06g0689 391 SMART PP2C_4 72 350 IPR001932 -
Tan06g0689 391 ProSiteProfiles PPM-type phosphatase domain profile. 82 352 IPR001932 -
Tan06g0689 391 Gene3D - 60 357 IPR036457 -
Tan06g0689 391 SMART PP2C_SIG_2 97 352 IPR001932 -
Tan06g0689 391 ProSitePatterns PPM-type phosphatase domain signature. 121 129 IPR000222 GO:0043169(InterPro)
Tan06g0689 391 SUPERFAMILY PP2C-like 77 353 IPR036457 -
Tan06g0689 391 MobiDBLite consensus disorder prediction 54 74 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0689 Tan-Chr6:5245633 Tan06g2803 Tan-Chr6:80128457 3.50E-107 dispersed
Tan06g0689 Tan-Chr6:5245633 Tan02g2119 Tan-Chr2:90674721 5.50E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0689 K14803 - csv:101216626 690.649