Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan06g0761 | ATGGCGACGAGGAATCGGACCGCGCAGTTCAGAAGGCACAGGGATGCCGTGAAGAGCGTCCGTGCGCCTTTATCTTCCTCGGCAGCTGGTTCGAGCGGGCCAGTTATTGAGATGGTGAGTTCGTCTCTTCTTCGTTCAAAGCGTTCTTCTTCTTACGCTCCTCTGAGCACTGAAGATCCAGGACCGTCGAGCGATGCATTTATGGTGGGTCTACCTCCAGCTTGGGTGGATGATACTGAAGAAATAACGGTTAACATACAGCAAATTCGTAGGAAGATGGCGGAGTTAGTCAAAGCTCATTCTAAAGCTTTAATGCCTTCTTTTGCTGATGGCAAAGAAGATCAGCATACGATTGAGACACTAACGCGAGAGATTACCAATCTTTTGAAAACCTCTGAGAAGAGGTTGAAGAAAATTTCTAGTACTGGGTCATCGGAGGATATTAATATTAGAAAAAATGTTCAGCGTTCTCTTGCTACAGAGCTTCAAAATCTTTCTATGGACCTTCGTAGAAGACAGTCAATGTATCTGAAACGACTGCAGCAGCAAAAGGAGGGACATGATGAAATTGATTTGGAGATAAATTTGAATGGCAACAAAACTCTACATGAGGATGATGAATATGGTGAATTTGGAATCAATGAAAACCAAACGATGGCATTAGGAATCGATGAGCAACATATCCAGGGAAGGGAGAAGGAGATCAGACAGGTTGTGAAATCAGTGAATGGACTCGCACAAATTATGAAGGATCTCTCAACCCTTGTTATAGACCAGGGTACTATTGTCGATAGGATCGACCACAATATTCAAAATGTTGCTGCATCCGTGGAGGAAGGTTATAAACAACTTCAGAAGGCAGAGAAGACTCAGAAGAATGGAGGAATGGTGAAGTGTGCAACAGTGCTTGTTATTATGTGTTTCGTAATGCTGGTTCTGTTGATACTCAAGGAGATTATTATGTAA | 966 | 43.06 | MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSSYAPLSTEDPGPSSDAFMVGLPPAWVDDTEEITVNIQQIRRKMAELVKAHSKALMPSFADGKEDQHTIETLTREITNLLKTSEKRLKKISSTGSSEDINIRKNVQRSLATELQNLSMDLRRRQSMYLKRLQQQKEGHDEIDLEINLNGNKTLHEDDEYGEFGINENQTMALGIDEQHIQGREKEIRQVVKSVNGLAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQKAEKTQKNGGMVKCATVLVIMCFVMLVLLILKEIIM | 321 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6026018 | 6031004 | - | Tan0008342.1 | Tan06g0761 | 755465 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan06g0761 | 321 | FunFam | Syntaxin-43 | 72 | 279 | - | - | |
Tan06g0761 | 321 | PANTHER | SYNTAXIN | 82 | 306 | IPR045242 | GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER) | |
Tan06g0761 | 321 | SMART | tSNARE_6 | 219 | 287 | IPR000727 | - | |
Tan06g0761 | 321 | SMART | SynN_4 | 66 | 181 | IPR006011 | GO:0016020(InterPro) | |
Tan06g0761 | 321 | Pfam | SNARE domain | 261 | 313 | IPR000727 | - | |
Tan06g0761 | 321 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Tan06g0761 | 321 | CDD | SNARE_syntaxin16 | 228 | 286 | - | - | |
Tan06g0761 | 321 | Gene3D | - | 72 | 279 | - | - | |
Tan06g0761 | 321 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 225 | 287 | IPR000727 | - | |
Tan06g0761 | 321 | SUPERFAMILY | t-snare proteins | 71 | 280 | IPR010989 | GO:0016020(InterPro)|GO:0016192(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g0761 | Tan-Chr6:6026018 | Tan08g0630 | Tan-Chr8:6385332 | 4.90E-75 | dispersed | |
Tan06g0761 | Tan-Chr6:6026018 | Tan06g0762 | Tan-Chr6:6026018 | 1.20E-166 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan06g0761 | K08489 | - | csv:101204192 | 548.895 |