Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0839 ATGGCCGGTGTCATCAAAGTCCACGGAATCCCCAATTCCACTGCCACATGTAGAGTTCTTGCTGCCCTCTACGAGAAGGGGCTTCAATTCGAGCTCGTTAACGTCAAGTTGCACGAAGGAGAACATAAGCAAGAGCCCTTCCTCTCAATCAATCCCTTTGGTCAAGTCCCCGGGTTCCATGATGGAGATCTGGCGCTTTTTGAATCCAGGGCAATTACACAGTACATCTCGGCTAATTATGCTAGCAATGGTAACGAGTTGATTTCCCAAGACCCCAAGAAAGCAGCGATCGTATTAACATGGATTGAAGTGGAGAGCCACCATTTTGACCCGGTAGCCATGAAACTGGTGTTCGAGCTCTGTTTAAAGCCAGCTTTTGGGTGGGGTGAGACAGATGCTTCTGTGGTTGAGCAAAGTGAAGCTGATTTAGGCAAAGTTCTTGACATCTACGAGAAAAGGCTGTCCGAGTCCAAATGCTTAGGAGGGGATTCCTACAGTTTGGCTGATCTGCACCATCTCCCTGTATTAGGCTACTTGTTGGCGACACCGTCGAAGCATCTGTTTGCATCTCGGCCCCATGTCAATGCTTGGGTGGCTGATATCATGGCCAGGCCGGCTTGGGCTAAGGTTCTTGCCCTTCGCAACTAA 648 49.54 MAGVIKVHGIPNSTATCRVLAALYEKGLQFELVNVKLHEGEHKQEPFLSINPFGQVPGFHDGDLALFESRAITQYISANYASNGNELISQDPKKAAIVLTWIEVESHHFDPVAMKLVFELCLKPAFGWGETDASVVEQSEADLGKVLDIYEKRLSESKCLGGDSYSLADLHHLPVLGYLLATPSKHLFASRPHVNAWVADIMARPAWAKVLALRN 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6930670 6931847 - Tan0014397.1 Tan06g0839 755543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0839 215 Pfam Glutathione S-transferase, C-terminal domain 110 205 IPR004046 -
Tan06g0839 215 SFLD Glutathione Transferase (cytosolic) 4 212 IPR040079 -
Tan06g0839 215 Pfam Glutathione S-transferase, N-terminal domain 4 77 IPR004045 -
Tan06g0839 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 213 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Tan06g0839 215 SUPERFAMILY Thioredoxin-like 4 83 IPR036249 -
Tan06g0839 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 215 IPR010987 -
Tan06g0839 215 Gene3D Glutaredoxin 4 88 - -
Tan06g0839 215 SFLD Main.5: Phi-like 4 212 - -
Tan06g0839 215 CDD GST_N_Phi 4 79 - -
Tan06g0839 215 SUPERFAMILY GST C-terminal domain-like 86 210 IPR036282 -
Tan06g0839 215 FunFam Glutathione S-transferase F2 4 88 - -
Tan06g0839 215 Gene3D - 91 215 - -
Tan06g0839 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Tan06g0839 215 FunFam Glutathione S-transferase F2 89 211 - -
Tan06g0839 215 CDD GST_C_Phi 93 211 IPR034347 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0839 Tan-Chr6:6930670 Tan06g0841 Tan-Chr6:6976467 1.50E-96 dispersed
Tan06g0839 Tan-Chr6:6930670 Tan06g0840 Tan-Chr6:6961250 1.00E-92 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0839 K00799 - csv:101212291 370.933