Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan06g0840 | ATGGCCAGCATCAAAGTCCATGGAGTTCCCCTTTCCAGAGCCACATGTAGGGTTCTAGCTTGTCTCTACGAGAAAGACCTCGAATTCAAGTTTGTCAATCTCAAATTGCGCGAATGGGAACATAAGAAACAGCCATTCCTCTCCATCAATCCATTTGGACTAATTCCTGGATTCCAAGATGGAGATTTGACGCTTTTTGAATCTCGAGCGATCACGGAGTACATCTCGAAAAATTATGCTAGTAATGAAACCCAATTGATTTCTAAAGACCCTAAGAAAGCAGCAATCATATCAACATGGATTGAAGTGGAGAGCCATCATTTTGACCCACCAGCCACAAAACTAGTGTTTGAGCTATGCTTGAATCCCATGTTTGGGTGGGGTGAGACTAATGCTGCAGTGGTTGAGCAAAGTGAAGCTGAGTTAGCCAAAGTTCTTGATATCTATGAGAATAGGTTGGCTCAGTCCAAATACTTGGCTGGTCAGTCCTTCACTTTGGCTGATCTTCACCATCTCCCATCTTTAGGGTTCTTGTTGGGGACACAGACAAAGAAACTGTTTGAATCTCGGCCCCATGTCAATGCTTGGATTGTTGATATCATGGCCAGGCCAGCTTGGGCTAAGGTGCTTGCTTTGCGCTAA | 642 | 44.39 | MASIKVHGVPLSRATCRVLACLYEKDLEFKFVNLKLREWEHKKQPFLSINPFGLIPGFQDGDLTLFESRAITEYISKNYASNETQLISKDPKKAAIISTWIEVESHHFDPPATKLVFELCLNPMFGWGETNAAVVEQSEAELAKVLDIYENRLAQSKYLAGQSFTLADLHHLPSLGFLLGTQTKKLFESRPHVNAWIVDIMARPAWAKVLALR | 213 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6961250 | 6962059 | + | Tan0002623.1 | Tan06g0840 | 755544 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan06g0840 | 213 | Gene3D | - | 90 | 213 | - | - | |
Tan06g0840 | 213 | PANTHER | GLUTATHIONE S-TRANSFERASE RHO | 1 | 212 | - | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER) | |
Tan06g0840 | 213 | CDD | GST_C_Phi | 92 | 210 | IPR034347 | - | |
Tan06g0840 | 213 | Pfam | Glutathione S-transferase, C-terminal domain | 115 | 204 | IPR004046 | - | |
Tan06g0840 | 213 | Gene3D | Glutaredoxin | 1 | 87 | - | - | |
Tan06g0840 | 213 | SFLD | Main.5: Phi-like | 1 | 211 | - | - | |
Tan06g0840 | 213 | SUPERFAMILY | GST C-terminal domain-like | 74 | 211 | IPR036282 | - | |
Tan06g0840 | 213 | FunFam | Glutathione S-transferase F2 | 88 | 210 | - | - | |
Tan06g0840 | 213 | SUPERFAMILY | Thioredoxin-like | 1 | 82 | IPR036249 | - | |
Tan06g0840 | 213 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 90 | 213 | IPR010987 | - | |
Tan06g0840 | 213 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 76 | IPR004045 | - | |
Tan06g0840 | 213 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 2 | 83 | IPR004045 | - | |
Tan06g0840 | 213 | FunFam | Glutathione S-transferase F2 | 3 | 87 | - | - | |
Tan06g0840 | 213 | SFLD | Main (cytGST) | 1 | 211 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g0840 | Tan-Chr6:6961250 | Tan06g0843 | Tan-Chr6:6978384 | 2.10E-82 | dispersed | |
Tan06g0839 | Tan-Chr6:6930670 | Tan06g0840 | Tan-Chr6:6961250 | 1.00E-92 | tandem | |
Tan06g0840 | Tan-Chr6:6961250 | Tan06g0841 | Tan-Chr6:6976467 | 7.70E-101 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan06g0840 | K00799 | - | csv:101212536 | 344.739 |