Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0840 ATGGCCAGCATCAAAGTCCATGGAGTTCCCCTTTCCAGAGCCACATGTAGGGTTCTAGCTTGTCTCTACGAGAAAGACCTCGAATTCAAGTTTGTCAATCTCAAATTGCGCGAATGGGAACATAAGAAACAGCCATTCCTCTCCATCAATCCATTTGGACTAATTCCTGGATTCCAAGATGGAGATTTGACGCTTTTTGAATCTCGAGCGATCACGGAGTACATCTCGAAAAATTATGCTAGTAATGAAACCCAATTGATTTCTAAAGACCCTAAGAAAGCAGCAATCATATCAACATGGATTGAAGTGGAGAGCCATCATTTTGACCCACCAGCCACAAAACTAGTGTTTGAGCTATGCTTGAATCCCATGTTTGGGTGGGGTGAGACTAATGCTGCAGTGGTTGAGCAAAGTGAAGCTGAGTTAGCCAAAGTTCTTGATATCTATGAGAATAGGTTGGCTCAGTCCAAATACTTGGCTGGTCAGTCCTTCACTTTGGCTGATCTTCACCATCTCCCATCTTTAGGGTTCTTGTTGGGGACACAGACAAAGAAACTGTTTGAATCTCGGCCCCATGTCAATGCTTGGATTGTTGATATCATGGCCAGGCCAGCTTGGGCTAAGGTGCTTGCTTTGCGCTAA 642 44.39 MASIKVHGVPLSRATCRVLACLYEKDLEFKFVNLKLREWEHKKQPFLSINPFGLIPGFQDGDLTLFESRAITEYISKNYASNETQLISKDPKKAAIISTWIEVESHHFDPPATKLVFELCLNPMFGWGETNAAVVEQSEAELAKVLDIYENRLAQSKYLAGQSFTLADLHHLPSLGFLLGTQTKKLFESRPHVNAWIVDIMARPAWAKVLALR 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6961250 6962059 + Tan0002623.1 Tan06g0840 755544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0840 213 Gene3D - 90 213 - -
Tan06g0840 213 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 212 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Tan06g0840 213 CDD GST_C_Phi 92 210 IPR034347 -
Tan06g0840 213 Pfam Glutathione S-transferase, C-terminal domain 115 204 IPR004046 -
Tan06g0840 213 Gene3D Glutaredoxin 1 87 - -
Tan06g0840 213 SFLD Main.5: Phi-like 1 211 - -
Tan06g0840 213 SUPERFAMILY GST C-terminal domain-like 74 211 IPR036282 -
Tan06g0840 213 FunFam Glutathione S-transferase F2 88 210 - -
Tan06g0840 213 SUPERFAMILY Thioredoxin-like 1 82 IPR036249 -
Tan06g0840 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 213 IPR010987 -
Tan06g0840 213 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Tan06g0840 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Tan06g0840 213 FunFam Glutathione S-transferase F2 3 87 - -
Tan06g0840 213 SFLD Main (cytGST) 1 211 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0840 Tan-Chr6:6961250 Tan06g0843 Tan-Chr6:6978384 2.10E-82 dispersed
Tan06g0839 Tan-Chr6:6930670 Tan06g0840 Tan-Chr6:6961250 1.00E-92 tandem
Tan06g0840 Tan-Chr6:6961250 Tan06g0841 Tan-Chr6:6976467 7.70E-101 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0840 K00799 - csv:101212536 344.739