Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0842 ATGCACACAAGGTGTTTGATAATTTGTCTCTGTGTAGAATCCAGGGCAATCACACAATACATCTCGAATAATTATGCTAATAATGGAACCCAATTGATTTCCCAAGACACTAAGAAAGCAGCGATCGTATTAACATGGATTGAAGTGGAGAGCCACCATTTTGACCCACCAGCCTCGAAACTACTGTTCGAGCTCTGCTTGAAGTCTTTGCTTGGGTGGGGCGAGGCAGATGCTGCAGTGGTTGAGCAAAGTGAAGCTGAGTTAGCTAAAGTTCTTGATATCTATGAGAAGAAGCTGGCTCAGTCCAAATACTTGGCAGGTGAGTCCTTCACTTTGGCTGATTTGCACCATCTCCCAGCCTTAGGGTTCTTGTTGGAGATACAGAGCAAGAAATTGTTTGAATCTCGGCCCCATGTCAATGCTTGGGCGGCTGATATCATGGCCAGGCCAGCTTGGGCTAAGGTGCTTGCTTTGCGCAAATAA 483 45.96 MHTRCLIICLCVESRAITQYISNNYANNGTQLISQDTKKAAIVLTWIEVESHHFDPPASKLLFELCLKSLLGWGEADAAVVEQSEAELAKVLDIYEKKLAQSKYLAGESFTLADLHHLPALGFLLEIQSKKLFESRPHVNAWAADIMARPAWAKVLALRK 160
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6976467 6977931 + Tan0012105.2 Tan06g0842 755546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0842 160 SUPERFAMILY GST C-terminal domain-like 20 159 IPR036282 -
Tan06g0842 160 CDD GST_C_Phi 38 156 IPR034347 -
Tan06g0842 160 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 36 160 IPR010987 -
Tan06g0842 160 FunFam Glutathione S-transferase F2 34 156 - -
Tan06g0842 160 Gene3D - 36 160 - -
Tan06g0842 160 Pfam Glutathione S-transferase, C-terminal domain 70 150 IPR004046 -
Tan06g0842 160 SFLD Glutathione Transferase (cytosolic) 12 149 IPR040079 -
Tan06g0842 160 PANTHER GLUTATHIONE S-TRANSFERASE RHO 12 159 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Tan06g0842 160 SFLD Main (cytGST) 12 149 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0841 Tan-Chr6:6976467 Tan06g0842 Tan-Chr6:6976467 1.50E-80 tandem
Tan06g0842 Tan-Chr6:6976467 Tan06g0843 Tan-Chr6:6978384 2.30E-49 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0842 K00799 - csv:101212291 243.432