Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0843 ATGCCGAGCATCAAAATCCATGGAAGTCCCATTTCGACTGCCACAGCGAGAGTTCTGGCTTGTCTTTACGAGAAAGATCTCGAATATGAGATGGTTCTTGTAGACATGAAGAGTAACGAGCACAAGAAAGAGCCCTTCCTCTCCATCAACCCGTTTGGTCAAGTTCCTGGGTTTCAAGATGGGGATCTCACCATTTTCGAATCAAGGGCCATTACACAGTACCTTGCCCGCACCTACGCCAGCAAGGGATACCAATTGCTCTCCGACGATCCAAAGAAAGCCGCGATCATATCAACATGGATTGAAGTGGAAGGCCACCACTACGACCCACCGGGGGTGGCGCTGTCGTACGAGCAACTTGTCAAGCCACTATTCGGGCTCGGCGAAACCGATCCCGCAGCGGTGGCGGAGAACGAAGCTAAGTTAGGGAAAGTTCTTGACATCTACGAGAATCAGCTTAGCAAAAACAAGTTCTTGGCTGGAAATGAGTTCAGTTTGGCGGATCTGCACCACATCCCCAATGTGCACTACTTGTTGGCGACGCCGTCGAAGAAGCTGTTCGAGTCACGGCCGCGCGTTAATGCTTGGGTGGCCGAGATCACTGCAAGGCCTTCGTGGGCTAAGGTCACTGCCTTGCGCAATCAGAGTTGA 651 51.92 MPSIKIHGSPISTATARVLACLYEKDLEYEMVLVDMKSNEHKKEPFLSINPFGQVPGFQDGDLTIFESRAITQYLARTYASKGYQLLSDDPKKAAIISTWIEVEGHHYDPPGVALSYEQLVKPLFGLGETDPAAVAENEAKLGKVLDIYENQLSKNKFLAGNEFSLADLHHIPNVHYLLATPSKKLFESRPRVNAWVAEITARPSWAKVTALRNQS 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6978384 6981113 - Tan0020310.1 Tan06g0843 755547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0843 216 SUPERFAMILY Thioredoxin-like 1 83 IPR036249 -
Tan06g0843 216 Gene3D - 90 214 - -
Tan06g0843 216 CDD GST_N_Phi 4 77 - -
Tan06g0843 216 PANTHER GLUTATHIONE S-TRANSFERASE RHO 5 215 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Tan06g0843 216 Pfam Glutathione S-transferase, C-terminal domain 125 204 IPR004046 -
Tan06g0843 216 SUPERFAMILY GST C-terminal domain-like 74 212 IPR036282 -
Tan06g0843 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 216 IPR010987 -
Tan06g0843 216 Gene3D Glutaredoxin 3 87 - -
Tan06g0843 216 Pfam Glutathione S-transferase, N-terminal domain 12 77 IPR004045 -
Tan06g0843 216 FunFam Glutathione S-transferase F2 88 210 - -
Tan06g0843 216 SFLD Main (cytGST) 3 212 - -
Tan06g0843 216 CDD GST_C_Phi 92 209 IPR034347 -
Tan06g0843 216 SFLD Main.5: Phi-like 3 212 - -
Tan06g0843 216 FunFam Glutathione S-transferase F2 3 87 - -
Tan06g0843 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2801 Tan-Chr2:96361011 Tan06g0843 Tan-Chr6:6978384 7.10E-49 dispersed
Tan06g0840 Tan-Chr6:6961250 Tan06g0843 Tan-Chr6:6978384 2.10E-82 dispersed
Tan06g0841 Tan-Chr6:6976467 Tan06g0843 Tan-Chr6:6978384 5.80E-80 dispersed
Tan06g0843 Tan-Chr6:6978384 Tan06g0845 Tan-Chr6:6993098 2.30E-52 proximal
Tan06g0842 Tan-Chr6:6976467 Tan06g0843 Tan-Chr6:6978384 2.30E-49 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0843 K00799 - csv:101212771 399.438