Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan06g0845 | ATGGCGGCGCCGGTGAAGGTGTACGGATCTCCGATCTCGACATGCACAGCTCGAGTGTTGATATGCCTCCATGAAAAGGAAGTTCAGTTTGAGCTTCTTCATGTTGACCTTTTCAATGGCCAACATAAGCTTCCCCCATTTTTGGCTAAGAATCCCTTTGGCCAGATTCCAGCCCTAGAAGATGGTGATATCACCCTATTTGAATCAAGAGCGATCACATCCTACATCGCTGACAAGTACAAAGAAACTGGACCAGATCTCCTCCAGCAGCAGCAAAGCGCCAAGGAAGCCGCCATTGTCAAGCTCTGGCTGGAGGTGGAGTCCCACCATTACAGCCCTGCAATCACTTCCATCATTCACGAGTTCTTCACTGCTCACCTTCAAGGCCACGAGCCCGACCGGGCCCTCATCGACCGAGACTTGGAGCGCCTAGGTGCCGTTCTCGACGTCTACGAGCAGCGCCTAGGCGCCACCAAGTACCTGGCCGGCCATTGCTACACTTTGGTCGATCTCCATCACCTTCCTTACACTTTCTACTTAATGAAAACGCCGTGGGCGTCGCTGGTCAATGATCGGCCCAATGTTAAGGCTTGGTGGGATGATATTTCTTCCCGGCCGGCGTTTCTTAAGGTCGCTGAGGGGATGACTTTTGGTGGTCATGATAAGAAATGA | 672 | 52.23 | MAAPVKVYGSPISTCTARVLICLHEKEVQFELLHVDLFNGQHKLPPFLAKNPFGQIPALEDGDITLFESRAITSYIADKYKETGPDLLQQQQSAKEAAIVKLWLEVESHHYSPAITSIIHEFFTAHLQGHEPDRALIDRDLERLGAVLDVYEQRLGATKYLAGHCYTLVDLHHLPYTFYLMKTPWASLVNDRPNVKAWWDDISSRPAFLKVAEGMTFGGHDKK | 223 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6993098 | 6995649 | - | Tan0018356.1 | Tan06g0845 | 755549 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan06g0845 | 223 | Pfam | Glutathione S-transferase, C-terminal domain | 118 | 206 | IPR004046 | - | |
Tan06g0845 | 223 | Gene3D | Glutaredoxin | 3 | 88 | - | - | |
Tan06g0845 | 223 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 77 | IPR004045 | - | |
Tan06g0845 | 223 | Gene3D | - | 90 | 212 | - | - | |
Tan06g0845 | 223 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 93 | 223 | IPR010987 | - | |
Tan06g0845 | 223 | FunFam | Glutathione S-transferase F2 | 91 | 212 | - | - | |
Tan06g0845 | 223 | SFLD | Main (cytGST) | 3 | 215 | - | - | |
Tan06g0845 | 223 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 84 | IPR004045 | - | |
Tan06g0845 | 223 | CDD | GST_N_Phi | 4 | 79 | - | - | |
Tan06g0845 | 223 | CDD | GST_C_Phi | 95 | 212 | IPR034347 | - | |
Tan06g0845 | 223 | PANTHER | GLUTATHIONE S-TRANSFERASE RHO | 1 | 214 | - | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER) | |
Tan06g0845 | 223 | SUPERFAMILY | GST C-terminal domain-like | 75 | 214 | IPR036282 | - | |
Tan06g0845 | 223 | SFLD | Main.5: Phi-like | 3 | 215 | - | - | |
Tan06g0845 | 223 | SUPERFAMILY | Thioredoxin-like | 4 | 84 | IPR036249 | - | |
Tan06g0845 | 223 | FunFam | Glutathione S-transferase F2 | 4 | 88 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g0843 | Tan-Chr6:6978384 | Tan06g0845 | Tan-Chr6:6993098 | 2.30E-52 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan06g0845 | K00799 | - | vvi:100247639 | 315.849 |