Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0845 ATGGCGGCGCCGGTGAAGGTGTACGGATCTCCGATCTCGACATGCACAGCTCGAGTGTTGATATGCCTCCATGAAAAGGAAGTTCAGTTTGAGCTTCTTCATGTTGACCTTTTCAATGGCCAACATAAGCTTCCCCCATTTTTGGCTAAGAATCCCTTTGGCCAGATTCCAGCCCTAGAAGATGGTGATATCACCCTATTTGAATCAAGAGCGATCACATCCTACATCGCTGACAAGTACAAAGAAACTGGACCAGATCTCCTCCAGCAGCAGCAAAGCGCCAAGGAAGCCGCCATTGTCAAGCTCTGGCTGGAGGTGGAGTCCCACCATTACAGCCCTGCAATCACTTCCATCATTCACGAGTTCTTCACTGCTCACCTTCAAGGCCACGAGCCCGACCGGGCCCTCATCGACCGAGACTTGGAGCGCCTAGGTGCCGTTCTCGACGTCTACGAGCAGCGCCTAGGCGCCACCAAGTACCTGGCCGGCCATTGCTACACTTTGGTCGATCTCCATCACCTTCCTTACACTTTCTACTTAATGAAAACGCCGTGGGCGTCGCTGGTCAATGATCGGCCCAATGTTAAGGCTTGGTGGGATGATATTTCTTCCCGGCCGGCGTTTCTTAAGGTCGCTGAGGGGATGACTTTTGGTGGTCATGATAAGAAATGA 672 52.23 MAAPVKVYGSPISTCTARVLICLHEKEVQFELLHVDLFNGQHKLPPFLAKNPFGQIPALEDGDITLFESRAITSYIADKYKETGPDLLQQQQSAKEAAIVKLWLEVESHHYSPAITSIIHEFFTAHLQGHEPDRALIDRDLERLGAVLDVYEQRLGATKYLAGHCYTLVDLHHLPYTFYLMKTPWASLVNDRPNVKAWWDDISSRPAFLKVAEGMTFGGHDKK 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6993098 6995649 - Tan0018356.1 Tan06g0845 755549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0845 223 Pfam Glutathione S-transferase, C-terminal domain 118 206 IPR004046 -
Tan06g0845 223 Gene3D Glutaredoxin 3 88 - -
Tan06g0845 223 Pfam Glutathione S-transferase, N-terminal domain 4 77 IPR004045 -
Tan06g0845 223 Gene3D - 90 212 - -
Tan06g0845 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 223 IPR010987 -
Tan06g0845 223 FunFam Glutathione S-transferase F2 91 212 - -
Tan06g0845 223 SFLD Main (cytGST) 3 215 - -
Tan06g0845 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Tan06g0845 223 CDD GST_N_Phi 4 79 - -
Tan06g0845 223 CDD GST_C_Phi 95 212 IPR034347 -
Tan06g0845 223 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 214 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Tan06g0845 223 SUPERFAMILY GST C-terminal domain-like 75 214 IPR036282 -
Tan06g0845 223 SFLD Main.5: Phi-like 3 215 - -
Tan06g0845 223 SUPERFAMILY Thioredoxin-like 4 84 IPR036249 -
Tan06g0845 223 FunFam Glutathione S-transferase F2 4 88 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0843 Tan-Chr6:6978384 Tan06g0845 Tan-Chr6:6993098 2.30E-52 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0845 K00799 - vvi:100247639 315.849