Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0847 ATGAGGAGAAAATCCAAAACCCTAAGAACGACGATGACGACGACGAGGAAGAAGATGAAAGGGACATTGACGAGGCACTTGCAGGTCCAGTTAGGGCAGGTTTCTCTCGCCCCTCTCCACCTCCACCACTCCTCTTCCGACGCCTCTTCCACCGCCGCCTGCCTCCATAAAATCCCTGAATCTGAAGCACCGACGACGGTCAACGTTTCCGACGCTCTCCCCTCCTCGTCCCCTAACTTTGAGGACAGAGATTTCATCCTTAGCCAGGACTTCTTCTGTACCCCTGATTATATCACCCCGGACAATCAAAATCTGTTGAATGGTGTGGATTGCTACAAGGAAAGCACTCCTTGCCCTAAATCTCCAGAGAAGATTAATACTGTTAAGACTAAGAGAAAAATACATGACGGTGTTTTAGTACATCCTCTGAGTCCAAGTTTGTCCGGCCGCGAACAAGTTGTGGAGCTTGGAAATGACACTTTTGGAACAGATGATGTGGATATGGAGAAAGAGACAATGGCAATGCCAAAGAAACAAAACTATGTTTCTCAATCTGCAGTTGCTCTACGCTGTCGAGTTATGCCTCCTCCTTGCATGAAGAACCCATACTTGAAAGATGCTTCAGAAGTAGGTGTAGACCCGTTTGGCAATCAACGAACGAAATGTGCAGGATTTTTTCCTGCGCTGTTTAGTGGAGATGGTCTTTCAAGATATCACACTGATTTTCATGAGATAAAGCAAATAGGGACTGGAAATTTTAGCCGCGTCTTCAAGGTATTAAAGAGAATTGATGGTTGCTTATATGCTGTCAAACAAAGCACAAGACCGTTGCATCAAGACATAGAAAGGAGGAGAGCTTTGATGGAAGTACAAGCTTTGGCAGCTTTAGGAACTCATGAAAACATTGTTGGATACTATTCTTCATGGTTTGAAAATGAGCAACTCTACATTCAAATGGAACTCTGTGATTGTTGTTTATCCATTGGCAGGTATTCTCACCCGTTCTCTGAGGCTGATGCACTGAGAGCCTTATATCAGATTGCAAAAGCATTAGTATTTGTGCATGAGAAAGGAGTAGCTCATTTAGACGTGAAACCTGACAATATTTATGCCAAAGATGATGTTTATAAACTTGGTGATTTTGGATGCGCTACTCTTCTTGATAAAAGCCTACCAATTGAGGAGGGTGATGCACGCTATATGCCTCAAGAAATTCTGAATGATAGATACGATTATCTTGACAAGGTTGATATATTCTCCTTGGGAGCTGCTATTTATGAGATTGTGAGAGGTTCAACATTGCCAGAAACACATTTTATGAATCTGAAGGAGGGAAAATTGCCCCTCCTTCCTGGTCATTCATTGCAATTTCAAAACTTAATCAAGGTTATGGTGGATCCCGACCCAGCACGACGACCTTCAGCGAGGGAAATTCTTGAGAATCCCATATTTGATAAGGTCAGAAATCATCCAAAATCATAG 1482 43.05 MRRKSKTLRTTMTTTRKKMKGTLTRHLQVQLGQVSLAPLHLHHSSSDASSTAACLHKIPESEAPTTVNVSDALPSSSPNFEDRDFILSQDFFCTPDYITPDNQNLLNGVDCYKESTPCPKSPEKINTVKTKRKIHDGVLVHPLSPSLSGREQVVELGNDTFGTDDVDMEKETMAMPKKQNYVSQSAVALRCRVMPPPCMKNPYLKDASEVGVDPFGNQRTKCAGFFPALFSGDGLSRYHTDFHEIKQIGTGNFSRVFKVLKRIDGCLYAVKQSTRPLHQDIERRRALMEVQALAALGTHENIVGYYSSWFENEQLYIQMELCDCCLSIGRYSHPFSEADALRALYQIAKALVFVHEKGVAHLDVKPDNIYAKDDVYKLGDFGCATLLDKSLPIEEGDARYMPQEILNDRYDYLDKVDIFSLGAAIYEIVRGSTLPETHFMNLKEGKLPLLPGHSLQFQNLIKVMVDPDPARRPSAREILENPIFDKVRNHPKS 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7009286 7013821 + Tan0008967.1 Tan06g0847 755551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0847 493 ProSiteProfiles Protein kinase domain profile. 242 484 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g0847 493 SMART serkin_6 242 484 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g0847 493 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 79 480 IPR050339 GO:0004672(PANTHER)|GO:0004713(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)
Tan06g0847 493 SUPERFAMILY Protein kinase-like (PK-like) 235 488 IPR011009 -
Tan06g0847 493 FunFam Wee1-like protein kinase 321 488 - -
Tan06g0847 493 ProSitePatterns Protein kinases ATP-binding region signature. 248 271 IPR017441 GO:0005524(InterPro)
Tan06g0847 493 FunFam WEE protein kinase 232 320 - -
Tan06g0847 493 Gene3D Transferase(Phosphotransferase) domain 1 321 489 - -
Tan06g0847 493 Pfam Protein kinase domain 242 484 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g0847 493 Gene3D Phosphorylase Kinase; domain 1 232 320 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0847 Tan-Chr6:7009286 Tan10g0684 Tan-Chr10:5550614 9.70E-22 dispersed
Tan06g0847 Tan-Chr6:7009286 Tan06g2471 Tan-Chr6:77368857 1.40E-12 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67761 PF00069 Pkinase 6.20E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0847 K06632 - csv:101213255 856.67