Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan06g0847 | ATGAGGAGAAAATCCAAAACCCTAAGAACGACGATGACGACGACGAGGAAGAAGATGAAAGGGACATTGACGAGGCACTTGCAGGTCCAGTTAGGGCAGGTTTCTCTCGCCCCTCTCCACCTCCACCACTCCTCTTCCGACGCCTCTTCCACCGCCGCCTGCCTCCATAAAATCCCTGAATCTGAAGCACCGACGACGGTCAACGTTTCCGACGCTCTCCCCTCCTCGTCCCCTAACTTTGAGGACAGAGATTTCATCCTTAGCCAGGACTTCTTCTGTACCCCTGATTATATCACCCCGGACAATCAAAATCTGTTGAATGGTGTGGATTGCTACAAGGAAAGCACTCCTTGCCCTAAATCTCCAGAGAAGATTAATACTGTTAAGACTAAGAGAAAAATACATGACGGTGTTTTAGTACATCCTCTGAGTCCAAGTTTGTCCGGCCGCGAACAAGTTGTGGAGCTTGGAAATGACACTTTTGGAACAGATGATGTGGATATGGAGAAAGAGACAATGGCAATGCCAAAGAAACAAAACTATGTTTCTCAATCTGCAGTTGCTCTACGCTGTCGAGTTATGCCTCCTCCTTGCATGAAGAACCCATACTTGAAAGATGCTTCAGAAGTAGGTGTAGACCCGTTTGGCAATCAACGAACGAAATGTGCAGGATTTTTTCCTGCGCTGTTTAGTGGAGATGGTCTTTCAAGATATCACACTGATTTTCATGAGATAAAGCAAATAGGGACTGGAAATTTTAGCCGCGTCTTCAAGGTATTAAAGAGAATTGATGGTTGCTTATATGCTGTCAAACAAAGCACAAGACCGTTGCATCAAGACATAGAAAGGAGGAGAGCTTTGATGGAAGTACAAGCTTTGGCAGCTTTAGGAACTCATGAAAACATTGTTGGATACTATTCTTCATGGTTTGAAAATGAGCAACTCTACATTCAAATGGAACTCTGTGATTGTTGTTTATCCATTGGCAGGTATTCTCACCCGTTCTCTGAGGCTGATGCACTGAGAGCCTTATATCAGATTGCAAAAGCATTAGTATTTGTGCATGAGAAAGGAGTAGCTCATTTAGACGTGAAACCTGACAATATTTATGCCAAAGATGATGTTTATAAACTTGGTGATTTTGGATGCGCTACTCTTCTTGATAAAAGCCTACCAATTGAGGAGGGTGATGCACGCTATATGCCTCAAGAAATTCTGAATGATAGATACGATTATCTTGACAAGGTTGATATATTCTCCTTGGGAGCTGCTATTTATGAGATTGTGAGAGGTTCAACATTGCCAGAAACACATTTTATGAATCTGAAGGAGGGAAAATTGCCCCTCCTTCCTGGTCATTCATTGCAATTTCAAAACTTAATCAAGGTTATGGTGGATCCCGACCCAGCACGACGACCTTCAGCGAGGGAAATTCTTGAGAATCCCATATTTGATAAGGTCAGAAATCATCCAAAATCATAG | 1482 | 43.05 | MRRKSKTLRTTMTTTRKKMKGTLTRHLQVQLGQVSLAPLHLHHSSSDASSTAACLHKIPESEAPTTVNVSDALPSSSPNFEDRDFILSQDFFCTPDYITPDNQNLLNGVDCYKESTPCPKSPEKINTVKTKRKIHDGVLVHPLSPSLSGREQVVELGNDTFGTDDVDMEKETMAMPKKQNYVSQSAVALRCRVMPPPCMKNPYLKDASEVGVDPFGNQRTKCAGFFPALFSGDGLSRYHTDFHEIKQIGTGNFSRVFKVLKRIDGCLYAVKQSTRPLHQDIERRRALMEVQALAALGTHENIVGYYSSWFENEQLYIQMELCDCCLSIGRYSHPFSEADALRALYQIAKALVFVHEKGVAHLDVKPDNIYAKDDVYKLGDFGCATLLDKSLPIEEGDARYMPQEILNDRYDYLDKVDIFSLGAAIYEIVRGSTLPETHFMNLKEGKLPLLPGHSLQFQNLIKVMVDPDPARRPSAREILENPIFDKVRNHPKS | 493 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 7009286 | 7013821 | + | Tan0008967.1 | Tan06g0847 | 755551 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan06g0847 | 493 | ProSiteProfiles | Protein kinase domain profile. | 242 | 484 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan06g0847 | 493 | SMART | serkin_6 | 242 | 484 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan06g0847 | 493 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED | 79 | 480 | IPR050339 | GO:0004672(PANTHER)|GO:0004713(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER) | |
Tan06g0847 | 493 | SUPERFAMILY | Protein kinase-like (PK-like) | 235 | 488 | IPR011009 | - | |
Tan06g0847 | 493 | FunFam | Wee1-like protein kinase | 321 | 488 | - | - | |
Tan06g0847 | 493 | ProSitePatterns | Protein kinases ATP-binding region signature. | 248 | 271 | IPR017441 | GO:0005524(InterPro) | |
Tan06g0847 | 493 | FunFam | WEE protein kinase | 232 | 320 | - | - | |
Tan06g0847 | 493 | Gene3D | Transferase(Phosphotransferase) domain 1 | 321 | 489 | - | - | |
Tan06g0847 | 493 | Pfam | Protein kinase domain | 242 | 484 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan06g0847 | 493 | Gene3D | Phosphorylase Kinase; domain 1 | 232 | 320 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g0847 | Tan-Chr6:7009286 | Tan10g0684 | Tan-Chr10:5550614 | 9.70E-22 | dispersed | |
Tan06g0847 | Tan-Chr6:7009286 | Tan06g2471 | Tan-Chr6:77368857 | 1.40E-12 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67761 | PF00069 | Pkinase | 6.20E-47 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan06g0847 | K06632 | - | csv:101213255 | 856.67 |