Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0850 ATGGAAGTCGATCGGACGGCGGATAACTATCCCGATCTCCAAGAGAGCTCCGATCAGTCCAGCCCGAACCTCGCAGAAAGGAAGCTCCGACGGAACGATTCATTGGACGTTGAATCCCGCACCCTTCCCGGCGCCGCCGGCGGCGGCCATGGCCACAAGGTGGCGGGGGCGGCGAGCTGGGGAGTGATATTGCATCTGGCGTTTCAGAGCGTCGGAGTTGTGTACGGCGACATCGGAACGTCGCCGTTGTATGTGTATGCGAGTACGTTCACCGGCGGAATAAAGCATAACGACGACATTTTGGGGGTGCTGTCTTTAATTCTCTACACCCTTACTTTGATCCCTTTGCTCAAGTACGTCTTCTTCGTATTGCAGGCCAACGACAACGGCGAAGGTGGGACATTTGCTTTATACTCCCTACTATGCCGATACGCAAAAATCGGGCTGATACCAAGCGAGCAAGTGGAAGATCAAGAGGTTTCAAATTTTCAGGTGGCACTGCCGACCAACCGCCAGAGAATGGCCTCTTCCCTCAAGTCCAAGCTCGAAAACAGCCGCGCCGCCAAGATTTTCTTGCTCTTCGCCACCATGCTCGGCACTTCCATGGTCATCGGCGACGGCGTCCTCACTCCTTCCATCTCAGTTTTGTCGGCTGTTGGAGGAATCAAGAATGCTACATCTACTATGACACAAGACAAAATAGTGTGGATATCAGCAGCAATCTTGGTTTGCTTGTTCATGGTGCAAAGATTTGGTACCCATAAAGTTGGATACTCCTTTGCTCCCATTATTTGCATTTGGTTTGCACTTATTGGTGGCATTGGCTTCTACAATTTTTTGAAATTTGACCCTGCTGTCATCAAAGCTGTAAATCCAAAATACATTTTTGACTACTTCAAAAGAAACAAAAAGGATGCTTGGATCTCTCTCGGTGGCGTCGTTCTCGCCATTACAGGAACTGAAGCTCTATTTGCGGACGTGGGGCACTTCACAGTGATGTCCATAAGACTAAGCATGTGCTGCGTGGCCTACCCGGCCCTCGTCTCCGCCTACGTCGGTCAAGCCTCCTTTCTCCGCAAGCACTCCGATCTCGTCTTAGACACCTTTTTCGAATCTATTCCAGGTCCTCTCTACTGGCCCACGTTCGTGGTGGCGGTGCTCGCTTCCATCGTCGCCAGCCAAGCCATGATCTCCGGCACATTCTCCATCATTCAACAGTCCCTCTCCTATGGATGCTTCCCTAGAGTTAAAGTTGTTCACACTTCTTCCAAGTATGAGGGTCAAGTTTACATCCCTGAAGTTAACTACCTTCTCATGTTTGCTTGTCTTGGAGTCACTCTAGGGTTTAAAGACACAACGAGAATCGGAAACGCCTATGGCATTGCAGTGGTGTTTGTGATGGCACTCACTTCAAGTTTCCTAGTGCTCATCATGATCCTGATATGGAAATCTCACATACTTGTCATAATCTCCTATGTTCTCACCATTGGCTTATTGGAATTTTTCTATCTAAGTTCAGTGCTTTACAAGTTTGATCAAGGGGGCTATCTTCCTTTAGCTTTTGCTGGGTTTTTGATGACAATAATGTACATTTGGAATGATGTTCATAGAAGAAAATACTACTACGAACTTGAGCACAAGATTTCTCCTCAAAAGCTCAAGGACATTGCATCACTCACAACCGTCAATCGTGTCCCCGGCCTTGCCTTGTTCTACTCCGAGCTCGTCCAAGGCATTCCTCCAATCTTCAAGCATTATCTCGCCAACGTCCCGACTCTCCAAAGGGTCCTTGTTTTTGTGTCCTTCAAGTCCCTCCCGATAAGCAAAGTCCCGATGGAAGAGCGATTCTTGTTTCGGCGCGTCGAGCCTGATGACATCAATGTGTTTCGCTGCGTGGTTCGATATGGATATAGAGATATCATCCACGAGCAAGAGTCGTTCGAGAGAGTGTTGGTGGAGAGATTGAAAAGGTTTATAGAGGAAGAGTCGTGGACGTTGCAAAACGACGACGTTAGAGCCGAGGAGAAGAGGAGGAAAGTAAGAGAAGAGATAGAGGTGGTGGATAAAGCTTGGAGAGATGGGATTGTTCACTTGATTGGACAAAATGAAGTTGTGGCAAGCAAAGGGTCAGGTTTTGCAAAAAGGGTTTTAATCAATTATGCTTATAATGCATTGAGAAGAAACTTAAGACAAAGTGAAGAAGTCTTTTACATTCCTCGCAAGCGTATGCTCAAAGTGGGAATGACTTATGAGCTTTAG 2259 47.59 MEVDRTADNYPDLQESSDQSSPNLAERKLRRNDSLDVESRTLPGAAGGGHGHKVAGAASWGVILHLAFQSVGVVYGDIGTSPLYVYASTFTGGIKHNDDILGVLSLILYTLTLIPLLKYVFFVLQANDNGEGGTFALYSLLCRYAKIGLIPSEQVEDQEVSNFQVALPTNRQRMASSLKSKLENSRAAKIFLLFATMLGTSMVIGDGVLTPSISVLSAVGGIKNATSTMTQDKIVWISAAILVCLFMVQRFGTHKVGYSFAPIICIWFALIGGIGFYNFLKFDPAVIKAVNPKYIFDYFKRNKKDAWISLGGVVLAITGTEALFADVGHFTVMSIRLSMCCVAYPALVSAYVGQASFLRKHSDLVLDTFFESIPGPLYWPTFVVAVLASIVASQAMISGTFSIIQQSLSYGCFPRVKVVHTSSKYEGQVYIPEVNYLLMFACLGVTLGFKDTTRIGNAYGIAVVFVMALTSSFLVLIMILIWKSHILVIISYVLTIGLLEFFYLSSVLYKFDQGGYLPLAFAGFLMTIMYIWNDVHRRKYYYELEHKISPQKLKDIASLTTVNRVPGLALFYSELVQGIPPIFKHYLANVPTLQRVLVFVSFKSLPISKVPMEERFLFRRVEPDDINVFRCVVRYGYRDIIHEQESFERVLVERLKRFIEEESWTLQNDDVRAEEKRRKVREEIEVVDKAWRDGIVHLIGQNEVVASKGSGFAKRVLINYAYNALRRNLRQSEEVFYIPRKRMLKVGMTYEL 752
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7057270 7064082 + Tan0020614.1 Tan06g0850 755554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0850 752 Pfam K+ potassium transporter integral membrane domain 66 552 IPR053951 -
Tan06g0850 752 MobiDBLite consensus disorder prediction 1 50 - -
Tan06g0850 752 Pfam K+ potassium transporter C-terminal domain 566 752 IPR053952 -
Tan06g0850 752 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 37 751 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Tan06g0850 752 NCBIfam potassium uptake protein 66 751 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2201 Tan-Chr4:78878642 Tan06g0850 Tan-Chr6:7057270 1.60E-267 dispersed
Tan04g2203 Tan-Chr4:79101987 Tan06g0850 Tan-Chr6:7057270 1.40E-252 dispersed
Tan06g0848 Tan-Chr6:7015913 Tan06g0850 Tan-Chr6:7057270 3.00E-214 dispersed
Tan06g0850 Tan-Chr6:7057270 Tan10g1473 Tan-Chr10:21119255 4.20E-226 dispersed
Tan06g0849 Tan-Chr6:7029811 Tan06g0850 Tan-Chr6:7057270 3.50E-297 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0850 K03549 - csv:101213493 1335.86