Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0860 ATGATTTCTGTGGGGGGTAGGGATGCGAGGAAAGAAATAGGGCTAGGCGGTGCCAGGAGAGAGATGGAAGATACTGAGCTTGAAGAGGGAGAAGCTTGTTCATACCAGAACAATGAAGATTTTGATTCAAATATCGACCCTGATGTTGCTCTCTCCTACATCGATGTGAAAATTCAACATGTTTTGGGACACTTTCAGAAAGATTTTGAAGGTGGAGTCTCTGCAGAAAATTTGGGGGCAAAATTTGGTGGATATGGTTCATTTTTACCTTCCTATCAACGGTCTCCAGTTTGGTCTCATTCAAGGACTCCTCCGAAAGGTCATAATTGCAGTACATCCAGATCTCCCAATAATTTTCAACAGGAGGTTGGCCATAATAACTCTGTAGTTTCTTCAACTACACCTCAGTCAATAAGACCTGGACCCCCTTCTACTAGTTCTACATCACTACCCATAATCAAAGGTCCGAATCTGAATGAATCTTCCAAACAAGAAGTATGCACGTCTTTCCAGCATGTTGAAGAACTTGCTTCTGGATACGGATGTGCAAACAATAAATCCACTACTTCTTCAGACCAAAAATCATTGAAAGTGCGGATTAAAGTGGGTTCTGATAACCTGTCGACAAGAAAAAATGATGCAATCTATAGTGGTCTTGGCCTAGATGTTTCACCATCTTCATCATTAGATGACAGCCCCTCAGAAAGTGAAGGAATCTCTCGTGAGCTTCAAGATGGCCCATTTGAATCTCCAACTAGCATTCTTCAGATGATGACATCATTTCCAGTTCATGGAGGTCTCTTGCTATCACCTCTTCCCGATGATCTTCTTCACCTGACTCAGACGGGGAAGCCTGGAAGAGATAAAAAATCTAATCGTGTCCAACAGTACAATCAAGACCGCCCATTAGCAGGGGGGGCTTCTTTGAAAGGTGGTCAAATGTCAGTAGAGAAGAAAATGTCAAAAGATATAAATGACTTCTTGTCTGAATCAAAGAACACAAATAGGAGGGATTTTCTTAATGGCTCAATTACGTCAAAAAAGACTTCAGAAATTGATACAGTAGCTTGTGAGGAGCTTGTTTCTAATGCATTGAAGCTTCCGCTTTTAGCAAATTCACATGGCATATCGGGTGAGACTACAAAAAGTTTGAATAGACCATCTGAAACATTAGTGGAGGCAGATAAAGTTGTGGCAAGGGACAGACATTTTTTTGATCAACTGGAAGAGGGTCCAGCAGTAGAGCCTCCACTTACTATGGAGGATGAGAAGCAAACTAATGGTTCATCTGGAAAGGTTAGGGAGCCGAAAAAACCCAGTAAGTTCGACGATATTTCAATTTGTGCAAAAAAATCTGGAGAAAGCAAGAGGGAGAAGACAATTGACTTGATTGAGGCTGCCTCAAAGGGGAAGAATGCTTCAAACGGTGATCAAATTGATCCTCTCAAGCAGAATACTAATCATAAAACTGCACCACATGCACATAGCAACTCGAAGCATGCTTCAGGAAAGGATAATTTATTCCCTGAGGGCAAAAAGAAGTCAAAGTTGAGTCAAACTGATTGTATCCCCAATGGGGAGGTATCAAAACGTAGTATGAAGTCTGGTTCTTCAGGTTCCAAAACAAAGAGTATTAATAAAGCAGACAACATTTCAACCAGAACAGATATTGAAGATCACAAGCCACAGGACTCTAGAAAAACCAAAGATAGATACCGAGATTTCTTTGGGGAATTGGAAGAAGATGATAATCTAATAGATACATCAGAGATTCCTTTTGAGGATCAATTAAATCACTCTGATGTATTTGAAAAGCCAACATCTGTTATTCCTGCATCAAAGGAGAGATTATCTATTGAGAAAATTGGCAAGTCCTTGGCATCAAAAGCATTTCCGGAAGTAGTCACGAATCCTGCAAGTGGGACAGTAACTGACGCGGCTCCTGCTGGAGTGGACAACGTAACTCCACAAGACAACTGGGTTTGTTGCGACAGGTGTCAACAATGGCGGCTTCTTCCATTAGGCACAAATCTTTCTAGCCTACCTGAGAAGTGGGTCTGCAGCATGCTCGATTGGCTTCCTGGAATGAACCAATGTATGTTTAGTGAGGAGGAAACGACAAAAGCTCTAATAGCCAGGTTCCAAGCACCTGCTGCTCCTGAGGGTACTATTTACAGTAATCTGAGTGGAGTTATGCCAGGAGTGGCTAATGCTCGACCATATGAGCAAAATCACCGTCATTATGATTTTAATGCTCTGCCTGGTGGTGGAAAGAAGAAACATGGAGCAAAAGAAAGACCAAGTACAACACTTAAAGGGGATGCCCCTCAGCTATCAAACTCAAAGAAGCATGAAGGAGCGATGAAAAGCAGGAGTTTAGATGATGTGAACCAGTTGCCTATTGGAGATGAAGCTAATTTTCGTCATTTAAACAAGTCCGGTGATGTTCCTGTTGAGAAGCACAAGCATAAGTATAAAGAGAAGCAGGAATCTGTCGATATCCTATCTGATGAAGGTGCTACCAAGATTTTAAAGACTAAAAACAGAAAAGAGAAAGAACAAGATTACTCCAGACCTTCAAAGAAAGTTAGGACTGATGGTTTGGATTTGATTGATGAAGACCAGATATCAGGGCACAGTGGGCCTGTTGTGAAAGTTGGCCCAACCTTGAGCATTGGCTTTCCTTCTGCATCGGGTGGAACTAATAAGTCTAAAAATACGGACCATTCTTCTAAGGACTCAAAATATAACATGAATGTCATCCACCGAGCACCCAATGATAAGGGAGAAAACAAACCGCAGGGTGCTGTGGATGATGATTCCCTTGGAGGAGGAAATGGTAGTACCAAAAGCAATTCAAAGAAGAGAAAAGTGAAAGCATCCCCGGATATTCAAACTAATACTGGGTCTCTCAATGGTTCTGGCCATCTCCCACAGAAGAGAGTTCCTGTTACAGAGTTGAGTGACAACGACCATAGGAAGGAGAAAAAGGCAAAGCTATCTAAGCCTCCAGGTAAAGAATCCAGTGGTAGAAAAGAGAAAAAAGGTTCCCATTCTAAGAATTGGCCACATGGACAAGATGTAGGGAGCACTCTTTCTCATCGGAGTTTGGATGGTGCTGATTCTTTGAAAAGGGATTTAGGAGCGATACAACCTTCTCTTGTAGCCACTTCAAGTTCTTCTAAGATATCTGGTTCACATAAAACCAAATCCAGTTTCCAGGATATCAAAGGATCGCCAGTAGAATCTGTTTCTTCATCACCTATGAGAATACCTAACCGAGATAAAATTTTACAGTCATCAAGGGAAGGTAAGGATTTTCTGGATGGCATTCGTACAAGGTGCTCAGATGGGGAAGAAGAGGATGGTGGTAGTGACCGCTCTGGGACTGGTAGCAAGAAGAAGTCTGTTATGGCTCATCATAGGCCTTTAAAGTCCCCCTTGATTAATACTGTGGACAAAGGTGCTAGTAATATTTCAGGGAAAAAAGCTAAAGCAAAGGAGAAGTCTTCTTCTGATGTCCCAAATTGCGACCTTCCAAATGGTAGTCTTGGCAATTCAGGAATTGATCATCAGTATCCTTGTAAACCATGGGTTGAACAAGTTCAGAATGAAGATAGATCAAATGAAATACGATATAGGGGCAATGAGACATATCCAGTAAAAAATGGAAAGGATTTATCTTCACAGTTGAAGGACAAGAGTGGGAGCTATTGTTCGGACGTTGGCATGGATAAGGACAGGGTTCCTTATTCCCATGATGATTTGCGGGGAAGGAACTCTCCACATTCTGATTTGAAGGTTAAGAATGGTAAGCATAAGTTACAGGAAAACTCTAGGATCAAATCTGGAGATGCTAGGAAGGACGGTTCAGGAAAACTGTCCATTGACAGGGGTAAAAGACAAAGTGAATTAAATTTTGTCAAGCATGAAGGTCCAGATTCTACAGTAGATAGCAATTCCAAGGAGAATATGATTTTGTCTGCAAGGAAGAATCAGCAACATGATTGCAATGGTACTGCTTCAAAGAGGTCTCTTTTTCAGAAAAATGACCAACTTGAAAAAGTCTCTGGAAAAAGTACACCGGTGCCATTACCAACCTCGGGAGAACCTCGAAATCAGATGCCGCATTGCCCCCCTTCAGCAGGGGGTGGAAAAGGAAATGCGACTGATATTTTGCAAGTAGATGCTTCAGAAAGCAATGATGTGTCAAAGGGGAAAAAGCATGTTAAGAATCGTCAAAAGGACGCTCAGGCCAATGGCTCAAGACATTCCACACCCAATGAGCGGGTGTCGATTGATGCACCAAGTCCAGCTAGAAGGGACTCCTCCAACCAGGCTGCTACCAAAGCTATGAAAGAAGCTAAAGATTTGAAACATCTTGCTGATCGTTTTAAGAATTCTGGGTCCAATCACGAATCTATTGGGCTTTATTTCCAAGCAGCCCTTAAGTTTCTTTATGGAGCCTCTTTGCTTGAGTCGTCCAACAATGAGACTGCCAAACAGTCAATGCAAATATACAGTAGCACTGCAAAACTATGCGAGTTTTGTGCTCATGAGTATGAGAAAATCAAGGACATGGCTGCAGCTGCTTTGGCATACAAATGCATGGAAGTAGCTTACATGAGGGTGATCTATTCTTCACATAACAGTGCAATAAGAGACCGGCATGACTTGCAGACAGCTCTGCAAATGGGTCCTTCTGGGGAATCTCCATCATCTGCCTCTGACGTTGATAACTTAAATAACCCTGCTGCAGCAGACAAAGTTGCTCTTTCTAAGGGTGTCAGTTCGAGCCGAGCTACTGGACCCCATGTCATTCCTGCTAAAAGCCGTCCCAATTTTGTACGGTTGCTTAATTATGCGCAGGATGTAAATTTTGCCATGGAAGCATCAAGAAAATCACGAATTGCTTTTGCAGCTGCAAATGCGAGCTCAGGAGGGACAACCAATAAGGATGGTATCTCTTGCATCAAAACGGCCCTTGATTTTAACTTTCAAGACGTAGAAGGCCTGCTGTCTCTACTTGTAGGGGCTTCAATTTCCACAAAGGAGTTCTGTTTGTCTGTCCTATCGATTTGGCGACACCTTAACGCTCATTTCTTGATTTGCATGTCATTCTCGATCTTGGGTCATGCTAATATAAAGGATAAGACATGCAAAATCCGGTGA 5172 42.23 MISVGGRDARKEIGLGGARREMEDTELEEGEACSYQNNEDFDSNIDPDVALSYIDVKIQHVLGHFQKDFEGGVSAENLGAKFGGYGSFLPSYQRSPVWSHSRTPPKGHNCSTSRSPNNFQQEVGHNNSVVSSTTPQSIRPGPPSTSSTSLPIIKGPNLNESSKQEVCTSFQHVEELASGYGCANNKSTTSSDQKSLKVRIKVGSDNLSTRKNDAIYSGLGLDVSPSSSLDDSPSESEGISRELQDGPFESPTSILQMMTSFPVHGGLLLSPLPDDLLHLTQTGKPGRDKKSNRVQQYNQDRPLAGGASLKGGQMSVEKKMSKDINDFLSESKNTNRRDFLNGSITSKKTSEIDTVACEELVSNALKLPLLANSHGISGETTKSLNRPSETLVEADKVVARDRHFFDQLEEGPAVEPPLTMEDEKQTNGSSGKVREPKKPSKFDDISICAKKSGESKREKTIDLIEAASKGKNASNGDQIDPLKQNTNHKTAPHAHSNSKHASGKDNLFPEGKKKSKLSQTDCIPNGEVSKRSMKSGSSGSKTKSINKADNISTRTDIEDHKPQDSRKTKDRYRDFFGELEEDDNLIDTSEIPFEDQLNHSDVFEKPTSVIPASKERLSIEKIGKSLASKAFPEVVTNPASGTVTDAAPAGVDNVTPQDNWVCCDRCQQWRLLPLGTNLSSLPEKWVCSMLDWLPGMNQCMFSEEETTKALIARFQAPAAPEGTIYSNLSGVMPGVANARPYEQNHRHYDFNALPGGGKKKHGAKERPSTTLKGDAPQLSNSKKHEGAMKSRSLDDVNQLPIGDEANFRHLNKSGDVPVEKHKHKYKEKQESVDILSDEGATKILKTKNRKEKEQDYSRPSKKVRTDGLDLIDEDQISGHSGPVVKVGPTLSIGFPSASGGTNKSKNTDHSSKDSKYNMNVIHRAPNDKGENKPQGAVDDDSLGGGNGSTKSNSKKRKVKASPDIQTNTGSLNGSGHLPQKRVPVTELSDNDHRKEKKAKLSKPPGKESSGRKEKKGSHSKNWPHGQDVGSTLSHRSLDGADSLKRDLGAIQPSLVATSSSSKISGSHKTKSSFQDIKGSPVESVSSSPMRIPNRDKILQSSREGKDFLDGIRTRCSDGEEEDGGSDRSGTGSKKKSVMAHHRPLKSPLINTVDKGASNISGKKAKAKEKSSSDVPNCDLPNGSLGNSGIDHQYPCKPWVEQVQNEDRSNEIRYRGNETYPVKNGKDLSSQLKDKSGSYCSDVGMDKDRVPYSHDDLRGRNSPHSDLKVKNGKHKLQENSRIKSGDARKDGSGKLSIDRGKRQSELNFVKHEGPDSTVDSNSKENMILSARKNQQHDCNGTASKRSLFQKNDQLEKVSGKSTPVPLPTSGEPRNQMPHCPPSAGGGKGNATDILQVDASESNDVSKGKKHVKNRQKDAQANGSRHSTPNERVSIDAPSPARRDSSNQAATKAMKEAKDLKHLADRFKNSGSNHESIGLYFQAALKFLYGASLLESSNNETAKQSMQIYSSTAKLCEFCAHEYEKIKDMAAAALAYKCMEVAYMRVIYSSHNSAIRDRHDLQTALQMGPSGESPSSASDVDNLNNPAAADKVALSKGVSSSRATGPHVIPAKSRPNFVRLLNYAQDVNFAMEASRKSRIAFAAANASSGGTTNKDGISCIKTALDFNFQDVEGLLSLLVGASISTKEFCLSVLSIWRHLNAHFLICMSFSILGHANIKDKTCKIR 1723
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7154241 7179546 - Tan0012692.1 Tan06g0860 755564

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0860 1723 MobiDBLite consensus disorder prediction 1222 1236 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 747 768 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 466 569 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 747 1039 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 552 569 - -
Tan06g0860 1723 ProSiteProfiles Zinc finger CW-type profile. 654 707 IPR011124 GO:0008270(InterPro)
Tan06g0860 1723 MobiDBLite consensus disorder prediction 12 26 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 97 151 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 1347 1446 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 1 40 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 427 449 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 1174 1188 - -
Tan06g0860 1723 Coils Coil 818 838 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 407 449 - -
Tan06g0860 1723 PANTHER CW-TYPE ZINC FINGER 18 1675 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 1096 1129 - -
Tan06g0860 1723 Pfam CW-type Zinc Finger 659 705 IPR011124 GO:0008270(InterPro)
Tan06g0860 1723 MobiDBLite consensus disorder prediction 1347 1368 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 518 551 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 1419 1446 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 985 1021 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 281 295 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 471 492 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 1246 1308 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 1023 1037 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 1055 1320 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 808 873 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 217 250 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 281 313 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 1401 1418 - -
Tan06g0860 1723 Gene3D - 648 709 - -
Tan06g0860 1723 MobiDBLite consensus disorder prediction 1055 1094 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0860 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0860 Tan-Chr6:7154241 Tan06g2647 Tan-Chr6:79000971 6.70E-110 dispersed
Tan06g0860 Tan-Chr6:7154241 Tan06g2646 Tan-Chr6:79000971 6.70E-110 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g330 . . . . . . . Bma05g01045 Cmo08g01190 Cmo17g00302 . . . . . . . . . . . . . . Cla06g00492 Cam06g0529 Cec06g0529 Cco06g0533 Clacu06g0513 Cmu06g0515 Cre06g1286 . . Cone7ag0159 Cone4ag0157 . . Chy11g01485 . . . . . . . . . Sed09g1215 . . Cma08g01217 Cma17g00314 Car08g01090 Car17g00288 Cpe12g00266 Cpe17g00012 Bhi12g02083 Tan06g0860 Cmetu01g0223 Lac12g2393 Hepe03g0115 . Lcy13g0188 . . . . . . . Lsi09g01415 . . Cme11g01992
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004464 2 0 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 0 1 1 5 1 2 42