Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan06g0891 | ATGGATTCATATTTAGGAAAATTTGTGATGAAGTTGGCTTTAAAAGCAGACCCTGAAGAGCATCGTGTTGCATTGTTTGTATTACTTCTCTGTGCTTGTATTGTAATAGGCCATCTTCTTGAGAAAAGTCGTTGGATAAATGAATCAGTTACTGCAATTTTCATTGGTCTTTTCTCTGGAACTCTCATCTTATTTACAACCAAAGGCAGAAACTCACATATCCTGGTGTTTAGTGAAGAACTTTTCTTCATTTATGTTCTTCCACCTATAATTTTTAATGCCGGGTTTCAGGTGAAAAAGAAACAGTTCTTTCGAAACTTTCTAATGATCATGTTGTTTGGGGCTGTTGGTACTGCAATTTCATTTTTCATCATATCACTAGGTTCACTTCATTTATTCAAGAAATTGGATATTGGCTTCTTAGAAGTGGGTGATTATTTTGCCCTTGGAGCAATCTTATCAGCCACAGATAGTGTCTGCACCTTGCAGGTGCTTAACCAGGATGAGACTCCTTTACTGTATAGTCTAGTCTTTGGTGAAGGTGTGGTTAATGATGCTACCTCTGTTGTACTTTTCAAAGCAATCCAGAGATTCGACCTCTCTCACATCACCTCAACCAATGGCATTCAGCTTCTGGGAAACTTTTTCTATTTATTTTTGACGAGTACATTGTTGGGAGTAATAGTTGGGTTGTCCAGTGCATACATTATAAAGAAACTGTACTTTGGCAGGCACTCAACTGATCGGGAGGTTGCTTTGATGATTTTAATGCCTTACCTTTCATATATGACTGCTGAATTGTGCTATCTTAGTGGCATTCTCACCATGTTCTTTTGTGGGATTGTCATGTCTCATTACACTTGGCATAATGTGACTGAAAGTTCAAGAGTGACCACCAAGCATACCTTTGCGACATTCTCATTTGTTTCGGAGATTTTCATCTTCTTATATGTTGGTATGGATGCCTTGGATATTGAGAAGTGGAAAGTTGTTGGCCAAAGGCCTTGGACATCGGCTGGAGTGAGTCTAATACTGCTAAGTTTAGTCCTTGTTGCAAGAGCAGCTTTTATATTTCCACTCTCTTTCATATCTAACTTGACTAGAAAGTCTCAGAGTGACAAAATTGGGTTTAAGCAGCAGGTCACAATTTGGTGGGCCGGGCTAATGAGAGGTGCTGTATCAGTGGCACTTGCTTATAATCAGTTTACAAGGTCAGGGCACACGCAATTGCAAGGGAATGCGATCATGATTACTAGCACAATCACGATTGTTCTCTTTACTAATGTGGTATTTGGACTATTAACTAAGCCTATTGTAAGGTACATGCTTTCACTGCCTGATACACAAACACAAATAGATGGCATAATAGTAGCAGATTCTCCACTTAAGTCACTGAATGACCATCTTTTGCCCGGGGGCGAAGATACCGAATCCGATGCTGGAGGACCGAACATTCCCCGTCCTACCAGCCTACGAATGCTATTGACAACGCCAACTAGCTCTGTCCATTACTATTGGCGGATGTTCGATGACCGATACATGCGTCCCGTTTTTGGTGGAAGAGGTTTTGTGCCTTTCATCCCTGGCTCACCAACTGAAAAGTATATCCATTGA | 1614 | 40.52 | MDSYLGKFVMKLALKADPEEHRVALFVLLLCACIVIGHLLEKSRWINESVTAIFIGLFSGTLILFTTKGRNSHILVFSEELFFIYVLPPIIFNAGFQVKKKQFFRNFLMIMLFGAVGTAISFFIISLGSLHLFKKLDIGFLEVGDYFALGAILSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFKAIQRFDLSHITSTNGIQLLGNFFYLFLTSTLLGVIVGLSSAYIIKKLYFGRHSTDREVALMILMPYLSYMTAELCYLSGILTMFFCGIVMSHYTWHNVTESSRVTTKHTFATFSFVSEIFIFLYVGMDALDIEKWKVVGQRPWTSAGVSLILLSLVLVARAAFIFPLSFISNLTRKSQSDKIGFKQQVTIWWAGLMRGAVSVALAYNQFTRSGHTQLQGNAIMITSTITIVLFTNVVFGLLTKPIVRYMLSLPDTQTQIDGIIVADSPLKSLNDHLLPGGEDTESDAGGPNIPRPTSLRMLLTTPTSSVHYYWRMFDDRYMRPVFGGRGFVPFIPGSPTEKYIH | 537 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 7520389 | 7535725 | + | Tan0003603.1 | Tan06g0891 | 755595 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan06g0891 | 537 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 18 | 527 | IPR018422 | GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro) | |
| Tan06g0891 | 537 | NCBIfam | sodium/hydrogen exchanger 3 | 22 | 475 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Tan06g0891 | 537 | Gene3D | - | 143 | 194 | - | - | |
| Tan06g0891 | 537 | PRINTS | Na+/H+ exchanger signature | 150 | 160 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Tan06g0891 | 537 | PRINTS | Na+/H+ exchanger signature | 95 | 109 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Tan06g0891 | 537 | PRINTS | Na+/H+ exchanger signature | 81 | 92 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Tan06g0891 | 537 | PRINTS | Na+/H+ exchanger signature | 110 | 118 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Tan06g0891 | 537 | MobiDBLite | consensus disorder prediction | 468 | 490 | - | - | |
| Tan06g0891 | 537 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 33 | - | - | |
| Tan06g0891 | 537 | Pfam | Sodium/hydrogen exchanger family | 32 | 440 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan05g1830 | Tan-Chr5:62027373 | Tan06g0891 | Tan-Chr6:7520389 | 9.30E-47 | dispersed | |
| Tan06g0891 | Tan-Chr6:7520389 | Tan09g0361 | Tan-Chr9:33754532 | 7.70E-206 | dispersed | |
| Tan06g0891 | Tan-Chr6:7520389 | Tan06g0892 | Tan-Chr6:7520389 | 1.00E-306 | tandem | |
| Tan06g0891 | Tan-Chr6:7520389 | Tan06g2626 | Tan-Chr6:78825591 | 2.20E-200 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan06g0891 | - | - | - | 0.0 |