Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0891 ATGGATTCATATTTAGGAAAATTTGTGATGAAGTTGGCTTTAAAAGCAGACCCTGAAGAGCATCGTGTTGCATTGTTTGTATTACTTCTCTGTGCTTGTATTGTAATAGGCCATCTTCTTGAGAAAAGTCGTTGGATAAATGAATCAGTTACTGCAATTTTCATTGGTCTTTTCTCTGGAACTCTCATCTTATTTACAACCAAAGGCAGAAACTCACATATCCTGGTGTTTAGTGAAGAACTTTTCTTCATTTATGTTCTTCCACCTATAATTTTTAATGCCGGGTTTCAGGTGAAAAAGAAACAGTTCTTTCGAAACTTTCTAATGATCATGTTGTTTGGGGCTGTTGGTACTGCAATTTCATTTTTCATCATATCACTAGGTTCACTTCATTTATTCAAGAAATTGGATATTGGCTTCTTAGAAGTGGGTGATTATTTTGCCCTTGGAGCAATCTTATCAGCCACAGATAGTGTCTGCACCTTGCAGGTGCTTAACCAGGATGAGACTCCTTTACTGTATAGTCTAGTCTTTGGTGAAGGTGTGGTTAATGATGCTACCTCTGTTGTACTTTTCAAAGCAATCCAGAGATTCGACCTCTCTCACATCACCTCAACCAATGGCATTCAGCTTCTGGGAAACTTTTTCTATTTATTTTTGACGAGTACATTGTTGGGAGTAATAGTTGGGTTGTCCAGTGCATACATTATAAAGAAACTGTACTTTGGCAGGCACTCAACTGATCGGGAGGTTGCTTTGATGATTTTAATGCCTTACCTTTCATATATGACTGCTGAATTGTGCTATCTTAGTGGCATTCTCACCATGTTCTTTTGTGGGATTGTCATGTCTCATTACACTTGGCATAATGTGACTGAAAGTTCAAGAGTGACCACCAAGCATACCTTTGCGACATTCTCATTTGTTTCGGAGATTTTCATCTTCTTATATGTTGGTATGGATGCCTTGGATATTGAGAAGTGGAAAGTTGTTGGCCAAAGGCCTTGGACATCGGCTGGAGTGAGTCTAATACTGCTAAGTTTAGTCCTTGTTGCAAGAGCAGCTTTTATATTTCCACTCTCTTTCATATCTAACTTGACTAGAAAGTCTCAGAGTGACAAAATTGGGTTTAAGCAGCAGGTCACAATTTGGTGGGCCGGGCTAATGAGAGGTGCTGTATCAGTGGCACTTGCTTATAATCAGTTTACAAGGTCAGGGCACACGCAATTGCAAGGGAATGCGATCATGATTACTAGCACAATCACGATTGTTCTCTTTACTAATGTGGTATTTGGACTATTAACTAAGCCTATTGTAAGGTACATGCTTTCACTGCCTGATACACAAACACAAATAGATGGCATAATAGTAGCAGATTCTCCACTTAAGTCACTGAATGACCATCTTTTGCCCGGGGGCGAAGATACCGAATCCGATGCTGGAGGACCGAACATTCCCCGTCCTACCAGCCTACGAATGCTATTGACAACGCCAACTAGCTCTGTCCATTACTATTGGCGGATGTTCGATGACCGATACATGCGTCCCGTTTTTGGTGGAAGAGGTTTTGTGCCTTTCATCCCTGGCTCACCAACTGAAAAGTATATCCATTGA 1614 40.52 MDSYLGKFVMKLALKADPEEHRVALFVLLLCACIVIGHLLEKSRWINESVTAIFIGLFSGTLILFTTKGRNSHILVFSEELFFIYVLPPIIFNAGFQVKKKQFFRNFLMIMLFGAVGTAISFFIISLGSLHLFKKLDIGFLEVGDYFALGAILSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFKAIQRFDLSHITSTNGIQLLGNFFYLFLTSTLLGVIVGLSSAYIIKKLYFGRHSTDREVALMILMPYLSYMTAELCYLSGILTMFFCGIVMSHYTWHNVTESSRVTTKHTFATFSFVSEIFIFLYVGMDALDIEKWKVVGQRPWTSAGVSLILLSLVLVARAAFIFPLSFISNLTRKSQSDKIGFKQQVTIWWAGLMRGAVSVALAYNQFTRSGHTQLQGNAIMITSTITIVLFTNVVFGLLTKPIVRYMLSLPDTQTQIDGIIVADSPLKSLNDHLLPGGEDTESDAGGPNIPRPTSLRMLLTTPTSSVHYYWRMFDDRYMRPVFGGRGFVPFIPGSPTEKYIH 537
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 7520389 7535725 + Tan0003603.1 Tan06g0891 755595
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0891 537 PANTHER SODIUM/HYDROGEN EXCHANGER 18 527 IPR018422 GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro)
Tan06g0891 537 NCBIfam sodium/hydrogen exchanger 3 22 475 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan06g0891 537 Gene3D - 143 194 - -
Tan06g0891 537 PRINTS Na+/H+ exchanger signature 150 160 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan06g0891 537 PRINTS Na+/H+ exchanger signature 95 109 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan06g0891 537 PRINTS Na+/H+ exchanger signature 81 92 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan06g0891 537 PRINTS Na+/H+ exchanger signature 110 118 IPR004709 GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan06g0891 537 MobiDBLite consensus disorder prediction 468 490 - -
Tan06g0891 537 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Tan06g0891 537 Pfam Sodium/hydrogen exchanger family 32 440 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g1830 Tan-Chr5:62027373 Tan06g0891 Tan-Chr6:7520389 9.30E-47 dispersed
Tan06g0891 Tan-Chr6:7520389 Tan09g0361 Tan-Chr9:33754532 7.70E-206 dispersed
Tan06g0891 Tan-Chr6:7520389 Tan06g0892 Tan-Chr6:7520389 1.00E-306 tandem
Tan06g0891 Tan-Chr6:7520389 Tan06g2626 Tan-Chr6:78825591 2.20E-200 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0891 - - - 0.0