Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g0923 ATGTCCATTTCTCCCCATCCCCTTCTCCTTCTTCTCACCATAGCCTCCCTCTCTGCCGCCGCCGCCGAATGCCCTCTCAACTTCACCGTCCTCCGTCAGTTCTCCCAGGGATCCGCCGTTTCTCGTCCCGACTTCTCCGACGAATGCCAATACATCCGTCTCGGCCTCCGCCTCGTCCTCTCTCAGTACCTCAAACTCACCGGCTCCTTCTTGCCCCCGGTGAACTCTTCCGATTCGTGCTGGAATTCTTACCAATCGGTCGTTAATGGAACTTGGACGAATTTCAATATTCGGACTTCTTGTGGGTTTCAGACCGGGTGGATCTCCCAAGGCTGTATGAACATCACTACCAAATCGGAGTTCGAGAGAATCGTTCCTAAATCGGCGCTCGATGGCGTTGTTGCGAACTGTAATCAATCGCTCGAAAATGGTTCCCCCTGTGCCTCGTGCACGACGAGGCTCGCGATCGTTCAGGCCTCGTTCTTAACCGGTCCGTCGATCGGCAATGTCACCGATTGCCCTGCATATCCGTCGATCTATGCGGCGGCGTTCGCTAGTCCGTTCGGACCGACGGATGGGGGAACTGCCAAATGCTTGTTCTCGCTTAATCCTCTGTCGTCCGGGGATTCAACAAGCAAGAAGCGGAATACGGTGGTTTTGGTGGTTCTGATTTGTTGTAGCGTTGTTGCAGCAACGGCGGCGGTGGTTGCCGGCGGGTGGTTTTTCTGGCGAAAACAGGGGAAATTGAAGAATAACGACAGAATTCGTAGAGTAGAGACGGGGTTGGGTTCTGGATTGGAGTCCATAAGTGCAAGCACTACGTTGGTGAAGTTCACATTCGATGAAATCAAAAGGGCGACGAGGAATTTCTCTAGAGATAACATAGTTGGGAGAGGAGGTTATGGGAATGTGTATAAAGGGGTTCTTTCTGATGATTCAGAAGTTGCATTGAAGAGGTTTAAGAACTGTTCTGCAGCAGGAGACGCCATTTTTGCTCATGAAGTTGAGGTAATTTCTAGTGTTAGACATGTTAATCTTGTCGCTTTGAGAGGTTATTGTATTGCAACAACTCCATTAGAGGGTCATCAGAGGATAATTGTGTGTGATTTGATGAAGAATGGGAGTCTTTATGATCATTTGTTTGGGTATTCTGATGAGAGATTGAGTTGGCCAATTAGGCAGAAGATTGCCCTTGGCACAGCCAGGGGATTGGCTTATCTCCATTATGGAGCTCAGCCTGCCATTATTCATAGAGATATCAAAGCCAGCAACATTCTTTTGGATGAAGATTTTGACCCCAAGGTTGCTGACTTTGGTTTGGCTAAGTTCACTCCAGAAGGAATGACTCATTTGAGCACAAGAGTTGCTGGGACTATGGGGTATGTGGCGCCTGAGTACGCGTTGTACGGTCAGTTGACGGAGCGTAGTGATGTGTATAGCTTTGGAGTCGTACTACTCGAGCTTTTGAGCGGGAGGAAGGCGCTCGGGGTGAGGAGCCCTGATAGCCAGCCATTTCTGGTGACTGATTGGGCTTGGTCTTTGGTGAGGGAACAAAAGGCAATGGATGTTATTGAAGAAGGCATGCCTGAGCTGGGTTCCCCTGAGGTTGTTGAGAAGTATGTTTTGATTGCTGTTCTTTGTTCCCATCCTCAGCTCTATGCCAGGCCATCAATGGATCAAGTTGTGAAAATGTTGGAAACTGACCTCTCTGTTCCTTCAATCCCTGAGAGACCTATCCCTCTGGTTGCTGAGATTGATGAAATTGAGAGATCTATGAGTAGTAGTAGCTCTGCTCAGCATTCCAGTTCAGTTGGCTTTCATAGTTACACATTACCAAATGACCACAAGTAG 1851 48.84 MSISPHPLLLLLTIASLSAAAAECPLNFTVLRQFSQGSAVSRPDFSDECQYIRLGLRLVLSQYLKLTGSFLPPVNSSDSCWNSYQSVVNGTWTNFNIRTSCGFQTGWISQGCMNITTKSEFERIVPKSALDGVVANCNQSLENGSPCASCTTRLAIVQASFLTGPSIGNVTDCPAYPSIYAAAFASPFGPTDGGTAKCLFSLNPLSSGDSTSKKRNTVVLVVLICCSVVAATAAVVAGGWFFWRKQGKLKNNDRIRRVETGLGSGLESISASTTLVKFTFDEIKRATRNFSRDNIVGRGGYGNVYKGVLSDDSEVALKRFKNCSAAGDAIFAHEVEVISSVRHVNLVALRGYCIATTPLEGHQRIIVCDLMKNGSLYDHLFGYSDERLSWPIRQKIALGTARGLAYLHYGAQPAIIHRDIKASNILLDEDFDPKVADFGLAKFTPEGMTHLSTRVAGTMGYVAPEYALYGQLTERSDVYSFGVVLLELLSGRKALGVRSPDSQPFLVTDWAWSLVREQKAMDVIEEGMPELGSPEVVEKYVLIAVLCSHPQLYARPSMDQVVKMLETDLSVPSIPERPIPLVAEIDEIERSMSSSSSAQHSSSVGFHSYTLPNDHK 616
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7800979 7803412 + Tan0013629.1 Tan06g0923 755627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g0923 616 Gene3D Phosphorylase Kinase; domain 1 258 369 - -
Tan06g0923 616 MobiDBLite consensus disorder prediction 590 616 - -
Tan06g0923 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g0923 616 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 251 369 - -
Tan06g0923 616 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524(InterPro)
Tan06g0923 616 PANTHER OS01G0750732 PROTEIN 47 600 IPR050885 -
Tan06g0923 616 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 371 573 - -
Tan06g0923 616 CDD STKc_IRAK 296 566 - -
Tan06g0923 616 Pfam Protein kinase domain 292 502 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g0923 616 Pfam SPARK 20 173 IPR043891 -
Tan06g0923 616 ProSiteProfiles Protein kinase domain profile. 290 569 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g0923 616 SUPERFAMILY Protein kinase-like (PK-like) 267 566 IPR011009 -
Tan06g0923 616 SMART serkin_6 290 565 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g0923 616 Gene3D Transferase(Phosphotransferase) domain 1 371 579 - -
Tan06g0923 616 MobiDBLite consensus disorder prediction 590 610 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0769 Tan-Chr1:7294172 Tan06g0923 Tan-Chr6:7800979 6.70E-95 dispersed
Tan06g0923 Tan-Chr6:7800979 Tan08g2116 Tan-Chr8:73093997 3.10E-70 dispersed
Tan06g0923 Tan-Chr6:7800979 Tan05g0624 Tan-Chr5:4631506 1.50E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67762 PF00069 Pkinase 6.70E-40 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g0923 - - - 0.0