Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1008 ATGGATTTAACTAATGGGGGTGAGCCTGGCGACGCTCGGGTAGCTAAGAATTCTGGTAATCTAGGAGCGGATATTGTTTCTGGTAAGTCTAGTAATCCCCAAGAGAAGAATTTGGGTTCAAAATTGGGGACAGGAAGCAAAAGCAGCAAGGATATGGTTTTTAGAGCTGATAAGATTGATTTCAAGAATTGGGATATTCAGCTGGACAAGCACTTAAGCAGGGCTTGGTCAAGGGACAGGGAAGTGCCTGCCAAAAAGGAAGAATGGGAGATTGACTTGTCTAAACTTGATATAAGATATGTCAAAGCTCATGGAACTTATGGTACTATTTACAGAGGAAATTATGATGGCAATGATGTTGCAGTGAAAGTGCTTGATTGGGGGGAGGATGGCGTTTCCTCAGTTGCTGAAATTGCTGCTCTACGAACATCTTTTCGCCAGGAAGTTGCTGTTTGGCATAAGCTTGACCATCCCAATGTTGCAAAGTTTTTTGGAGCATCAATGGGGACGTCCAACCTAAAAATCCCTTCTCAAAACTCATCAATTGATAGTAACCAATCTTTTCCTTCAAGGGCTTGTTGCGTTGTTGTTGAATATCTTCCCGGTGGAACATTGAAGAGCTTTTTAATCAAAAACAGGAAAAAGAAACTTGCATTTAAGGTTGTGATTCAACTTGTTTTGGATCTTTCTAGAGGTTTGAGTTATTTACACTCCAAAAAGATTGTACATCGTGATATTAAAACAGAAAATGTGCTCCTAGATGCTCAAAAGACTCTGAAAATTGTTGATTTTGGTGTTGCCCGAGTTGAAGCACAAAACCCAAGGGATATGACGGGGGAGACTGGCACCCTCGGTTACATGGCCCCCGAGGTTCCTTCTTCATTTTTTCTCTAA 894 41.39 MDLTNGGEPGDARVAKNSGNLGADIVSGKSSNPQEKNLGSKLGTGSKSSKDMVFRADKIDFKNWDIQLDKHLSRAWSRDREVPAKKEEWEIDLSKLDIRYVKAHGTYGTIYRGNYDGNDVAVKVLDWGEDGVSSVAEIAALRTSFRQEVAVWHKLDHPNVAKFFGASMGTSNLKIPSQNSSIDSNQSFPSRACCVVVEYLPGGTLKSFLIKNRKKKLAFKVVIQLVLDLSRGLSYLHSKKIVHRDIKTENVLLDAQKTLKIVDFGVARVEAQNPRDMTGETGTLGYMAPEVPSSFFL 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8848266 8852689 - Tan0004896.3 Tan06g1008 755712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1008 297 Pfam Protein kinase domain 104 291 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1008 297 FunFam Kinase suppressor of Ras 1 85 180 - -
Tan06g1008 297 Gene3D Transferase(Phosphotransferase) domain 1 183 294 - -
Tan06g1008 297 SMART serkin_6 96 296 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1008 297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan06g1008 297 ProSiteProfiles Protein kinase domain profile. 96 297 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan06g1008 297 SUPERFAMILY Protein kinase-like (PK-like) 83 293 IPR011009 -
Tan06g1008 297 Gene3D Phosphorylase Kinase; domain 1 84 178 - -
Tan06g1008 297 MobiDBLite consensus disorder prediction 23 47 - -
Tan06g1008 297 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 43 292 IPR051681 GO:0004674(PANTHER)|GO:0005886(PANTHER)
Tan06g1008 297 MobiDBLite consensus disorder prediction 1 47 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1008 Tan-Chr6:8848266 Tan10g0802 Tan-Chr10:6778818 3.50E-115 dispersed
Tan06g1007 Tan-Chr6:8848266 Tan06g1008 Tan-Chr6:8848266 3.20E-169 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67765 PF00069 Pkinase 5.50E-33 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1008 - - - 0.0