Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1013 ATGGGCAACGCCGACTACGTGTACCCATCGGCGGAGGGTGGCGGCGAGTGCTTGCACAGGGCGGCGATTCCGCCGCCGCAGCCGTTCGTAAAGTCGCTGAAGAACTCTCTGAAGGAGACGTTCTTCCCGGACGACCCGCTCCGGCAGTTCAAGAACCAGCCGGCGGCGAGGAAAGTGCTTTTGGGATTGCAGTACTTTTTTCCGGTGCTGGAATGGGGGCCTCGTTATAATTTAGGGCTTCTGAAATCGGATCTTATTTCCGGTATCACCATTGCTAGCCTCGCCATTCCTCAGGGGATTAGCTACGCCAAGCTCGCTAACTTGCCTCCAATTCTCGGCCTTTATTCGAGTTTTATTCCGCCGCTGATTTACGCGATGATGGGAAGCTCGAAGGACTTGGCCGTCGGAACGGTGGCGGTGGCGTCGCTTCTGACCGGCGCAATGTTAGGGGCGGAGGTTAACCCTGCCCAAAATCCCACTCTTTATCTCCACCTTGCTTTCACCGCCACCTTCTTCGCCGGACTCTTCCAAGCCTCCTTAGGCCTTTTAAGGCTAGGATTCATCGTGGATTTTTTGTCACATGCAACCATTGTTGGGTTCATGGCCGGCGCTGCCACGGTGGTGTGCCTGCAGCAGCTCAAAGGCATCCTCGGCCTGACCCATTTCACCCACGCGACCGACCTCGTCTCGGTCCTTCGATCGGTCTTCACCCAAGTCCATCAGTGGAGATGGGAAAGTGGGGTATTGGGATGCTGCTTTCTCTTTTTCCTCCTCGTCACCAGATACTTTAGCAAAAAAAAACCAAAGTTGTTTTGGATATCAGCAATGGCACCTTTGACGTCAGTAATTCTTGGAAGTCTTCTAGTTTTCCTCACTCATGCAGAAAAACATGGCGTCGAAGTGATTGGTGAGTTGAAGAAAGGCCTAAATCCAGTGTCCATTACAGATTTAGTGTTCGTGTCGCCTTATCTTTCTACTGCTATTAAAACCGGCATTATTACTGGCGTCATTGCTCTTGCGGAAGGAATAGCAGTTGGAAGAAGCTTTGCAATGTTCAAGCATTACAACATTGATGGCAACAAGGAAATGGTAGCCATTGGCACCATGAACATGGTCGGCTCTTGCTTCTCTTGCTATCTCACCACAGGCCCATTTTCGCGATCGGCTGTGAACTACAATGCAGGATGCAAAACGGCGGTATCGAACGTAGTAATGGCGATTGCAGTGATGCTGACGCTGCTTTTCTTGACTCCCCTGTTCCACTACACTCCTCTGGTGGTGCTTTCTTCCATCATCATTTCCGCCATGCTTGGCCTCATCGATTACGAAGCCGCCATTCACTTGTGGAAGGTTGATAAGTTCGATTTCCTTGTCTGCATTGGCGCTTATGCTGGTGTCGTCTTTGCCAGTGTTGAAATTGGCTTGGTCATTGCGGTGGTGATATCTCTACTCAGACTACTTTTGTTCGTTGCAAGGCCGAGGACGCTTGTGCTTGGAAACCTTCCTAATTCCACTGTTTACAGGAACGTCGAGCAATACCCGAATGCCAGTAATGTTCCCGGCATTCTCATACTTGAGATCGACGCTCCCATTTACTTTGCTAATTCCAGCTACTTGAGAGAAAGGATTATAAGGTGGGTTGATGAAGAGGAAGACAGGATAAAAGCTTCCGGCGAAAGTACCTTACAATATGTCGTATTGGACATGAGTGCTGTTGGAAACATTGATACCAGCGGAATAAGCATGTTTGAAGAGATCAAGAAGATTTTAGACAGGAGGGGGTTGAAGATAGTTTTAGCCAACCCTGGAGCTGAGGTGATGAAGAAGCTGGACAAGGGCAAGTTCATCGAGAGCCTCGGACACGAATGGATCTATCTTACGGTTGCCGAAGCTGTAGCAGCCTGCAACTACATGCTTCACTCCTGCAAACCAAACCCTGTAACTGATGAGAAAGCAGAGCCATGGAACAATGTCTAA 1977 49.72 MGNADYVYPSAEGGGECLHRAAIPPPQPFVKSLKNSLKETFFPDDPLRQFKNQPAARKVLLGLQYFFPVLEWGPRYNLGLLKSDLISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSKDLAVGTVAVASLLTGAMLGAEVNPAQNPTLYLHLAFTATFFAGLFQASLGLLRLGFIVDFLSHATIVGFMAGAATVVCLQQLKGILGLTHFTHATDLVSVLRSVFTQVHQWRWESGVLGCCFLFFLLVTRYFSKKKPKLFWISAMAPLTSVILGSLLVFLTHAEKHGVEVIGELKKGLNPVSITDLVFVSPYLSTAIKTGIITGVIALAEGIAVGRSFAMFKHYNIDGNKEMVAIGTMNMVGSCFSCYLTTGPFSRSAVNYNAGCKTAVSNVVMAIAVMLTLLFLTPLFHYTPLVVLSSIIISAMLGLIDYEAAIHLWKVDKFDFLVCIGAYAGVVFASVEIGLVIAVVISLLRLLLFVARPRTLVLGNLPNSTVYRNVEQYPNASNVPGILILEIDAPIYFANSSYLRERIIRWVDEEEDRIKASGESTLQYVVLDMSAVGNIDTSGISMFEEIKKILDRRGLKIVLANPGAEVMKKLDKGKFIESLGHEWIYLTVAEAVAACNYMLHSCKPNPVTDEKAEPWNNV 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8941271 8951152 - Tan0000772.1 Tan06g1013 755717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1013 658 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Tan06g1013 658 FunFam Sulfate transporter 31 492 638 - -
Tan06g1013 658 NCBIfam sulfate permease 68 631 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Tan06g1013 658 SUPERFAMILY SpoIIaa-like 515 636 IPR036513 -
Tan06g1013 658 ProSiteProfiles STAS domain profile. 512 635 IPR002645 -
Tan06g1013 658 CDD STAS_SulP_like_sulfate_transporter 513 628 - -
Tan06g1013 658 Pfam STAS domain 513 631 IPR002645 -
Tan06g1013 658 Gene3D STAS domain 492 638 IPR036513 -
Tan06g1013 658 Pfam Sulfate permease family 81 461 IPR011547 GO:0016020(InterPro)
Tan06g1013 658 PANTHER SULFATE TRANSPORTER 36 636 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1667 Tan-Chr4:35675300 Tan06g1013 Tan-Chr6:8941271 9.10E-209 dispersed
Tan04g1668 Tan-Chr4:35675300 Tan06g1013 Tan-Chr6:8941271 6.00E-202 dispersed
Tan06g1013 Tan-Chr6:8941271 Tan11g1359 Tan-Chr11:11899646 2.40E-201 dispersed
Tan10g0797 Tan-Chr10:6672866 Tan06g1013 Tan-Chr6:8941271 2.00E-285 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1013 K17471 - csv:101222260 1217.6