Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan06g1030 | ATGAGCAAATACGAATCCAGTTACCATGAGATTCTACTTCTCGACATCGGCCAAGCCGCCCGAAGGAGATGGAGAATTGCCTTTGCAGTAATATCCTCAATCCGGGCCATGCTTTCTCTAGCAGTGTCCAAAAGAAATGGCCATTGCAACTCAATCAACTTTGAGATCTTGGAGGAAGATTCCTATGAGGAACAAATAATCTGCACCAAAGATGATCAGAAGAAGCTGATTGAAATGGTGAAGAGCAAAAACATAGAAGCTTTTCGTGACCTTGGGGAAGCTCCAGCCATTGCTGCTTCTCTTGGAACAAATCTAGAGAATGGAATCAAGGACAATGGCGATGTCCTTAATGAACGGCGTCAAGTATTCGGTTCGAACACTTACCACAAGCGGCCTCCGAAGAGTTTCTTTCATTTTGTGGTGGAAGCTTTCAAGGACACCACCATTCTCATTTTACTTGTATGTGCGGCTCTGGCACTTGGGTTTGGAATAAAAGAACATGGAGCTCAAGAAGGATGGTATGAAGGAGGGAGCATATTTGTAGCTGTTGCGTTGGTGGTTGTTGTTTCAGCCATCAGTAACTTCAGACAGGAGATTCAATTCGAGAAGTTGTCCAAAATAAGTAACAACATCAAAGTGGAGGTGATGAGAGAAGGAAGGCGCACACAGGTTTCCATCTTCGAAATCGTGGTTGGAGATGTCGTGATTCTAAAGCTTGGGGACCAAATTCCAGCTGATGGGTTGTTCTTAAGTGGCCATTCATTGCAGGTGGATGAGTCAAGCATGACAGGAGAGAGCGATCATGTGGAACTCAATTCAACAGAGAACCCCTTCTTGTTGTCTGGAACAAAAGTAGTAGATGGCTATGGTCAAATGCTGGTGACATCAGTAGGAATGGACACGGCATGGGGTGAGATGATGAGCTCGATATCTCGGGATTCTGAGGAGCAAACACCACTGCAAGTTCGTCTTAACAAATTAACCACTTCTATAGGAAAGATAGGCCTCTCCGTTGCCTTCCTAGTCCTTGTTGTAATGTTAGCGCGCTATTTCACTGGAAACACAGAAGATGATTTCGGGAACACAGAGTACAATGGTCGAAAAACGGACGTAGATGATGTGCTCAATGCAGTTACCCGTATAGTTGCTGCTGCAGTTACCATAGTAGTTGTTGCAATCCCTGAAGGCTTGCCATTGGCTGTTACACTAACACTTGCTTACTCTATGAAGAGAATGATGGCAGATCAGGCAATGGTGAGGGAACTTTCTGCTTGTGAAACAATGGGATCAGCAACTGTGATTTGCACTGACAAAACAGGTACTTTGACATTAAACCAAATGAAAGTAACCAAATTTTGGCTTGGCCAAGAGTTCATTGAGGAAGAAAACCCTTCCCATACCATAGCAGAGACTGTTCGTGAGTTGATAATTCAAGGAGTAGGCTTGAACACAACTGGTAGTGTCTATCAACCTTCATCAGAATCCAAAACTGAAATCTCTGGTAGTCCAACTGAGAAAGCAATTCTCTCTTGGGCGGTCAAAGAATTCGGTATGGACATGGTAAAGTTGAAGAAATCATATACCATTCTTCATGTGAACACATTCAACTCAGAGAAGAAAAGAAGTGGGGTTTTGGTAAGAAAATTGGCTGATAACACAATCCATCAGCATTGGAAAGGAGCCGCTGAGATGATACTCTCAATGTGTTCAAGTTACTTTGAAAGAAATGGGAAAACATATCCCTTAGATAGCGAAAACCGAAGAAAACTTGAGAACATAATCCAAGGAATGGCAGCAAGTAGCCTAAGATGCATTGCCTTTGCTTATAGACAAATCTCAGACGAAGAGGAAAAAAATAGCATACAAATTGCTTCAGACTTGAAAGAAGATGGCTATACATTAATGGGAATAGTTGGCATGAAAGATCCATGTAGACCAGGGGTGAAGAAAGCTGTAGAAACATGTAAATCAGCTGGAGTTTCCATTAAAATGATCACAGGAGACAACATTTTCACAGCAAAAGCTATAGCTACAGAATGTGGAATACTAGATTTGGACCACAACCCCGCAAGCAAAGGAGAAGTAATAGAAGGTTCTGAATTCCGAAACTACTCAAATGAAGAGAGACTGCGACGGGTTGATCAAATCAAGGTGATGGCAAGATCGACTCCATTTGACAAGCTTTTGATGGTTCAATGCTTGAAACAGAAAGGCCATGTCGTAGCAGTAACTGGAGATGGCACAAATGACGCACCTGCTCTAAAAGAAGCCGACATAGGACTTTCGATGGGCATTGAAGGCACTGAGGTTGCAAAGGAGAGTTCAGACATTGTTATCTTGGATGATAACTTCACCACAGTCGCCACAGTCTTGAGGTGGGGAAGATGTGTATATAACAACATCCAAAAATTCATCCAATTTCAATTGACAGTCAATGTAGCAGCTCTCACAATTAACTTTATAGCAGCAGTATCGGCTGGAGAAGTTCCCTTAACAGCAGTTCAATTATTGTGGGTGAATCTCATAATGGATACATTGGGTGCTCTTGCACTTGCTACTGAGAGACCAAATGATGAATTAATGCACAAGCCTCCAGTGGGAAGAACAGAGCCCCTAATAACAAATATCATGTGGAGAAACCTTTTAGCTCAAGCTTTATATCAAATAGCAATACTCTTAATTTTCCAGTTCCAAGGAAGCAACATCTTCAATGTAAGTGAAGCGGTAAATGATACACTAATCTTCAACACTTTTGTTCTCTGCCAAATCTTCAACGAGTTCAACTCAAGGAAACTAGAGAAACAGAACGTCTTTGAAGGCATTCTAAAGAATCATTTATTTCTAGGGATTGTGGGAATAACAGTTGTTCTACAAGTTATTATGGTAGAATTCCTAAAGAAATTTGCAAACACAGTGAATCTAAATGGTTGGCAGTGGGGACTTTGCATTGCTATTGCAGCTGCTTCTTGGCCTATTGGTTGGATAGTCAAATTCTTGCCCGTTTCTGATAAGCCTTTCCTTAGCTACTTCAAGTTTTTCAAGGGCTGA | 3048 | 41.86 | MSKYESSYHEILLLDIGQAARRRWRIAFAVISSIRAMLSLAVSKRNGHCNSINFEILEEDSYEEQIICTKDDQKKLIEMVKSKNIEAFRDLGEAPAIAASLGTNLENGIKDNGDVLNERRQVFGSNTYHKRPPKSFFHFVVEAFKDTTILILLVCAALALGFGIKEHGAQEGWYEGGSIFVAVALVVVVSAISNFRQEIQFEKLSKISNNIKVEVMREGRRTQVSIFEIVVGDVVILKLGDQIPADGLFLSGHSLQVDESSMTGESDHVELNSTENPFLLSGTKVVDGYGQMLVTSVGMDTAWGEMMSSISRDSEEQTPLQVRLNKLTTSIGKIGLSVAFLVLVVMLARYFTGNTEDDFGNTEYNGRKTDVDDVLNAVTRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRELSACETMGSATVICTDKTGTLTLNQMKVTKFWLGQEFIEEENPSHTIAETVRELIIQGVGLNTTGSVYQPSSESKTEISGSPTEKAILSWAVKEFGMDMVKLKKSYTILHVNTFNSEKKRSGVLVRKLADNTIHQHWKGAAEMILSMCSSYFERNGKTYPLDSENRRKLENIIQGMAASSLRCIAFAYRQISDEEEKNSIQIASDLKEDGYTLMGIVGMKDPCRPGVKKAVETCKSAGVSIKMITGDNIFTAKAIATECGILDLDHNPASKGEVIEGSEFRNYSNEERLRRVDQIKVMARSTPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIEGTEVAKESSDIVILDDNFTTVATVLRWGRCVYNNIQKFIQFQLTVNVAALTINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATERPNDELMHKPPVGRTEPLITNIMWRNLLAQALYQIAILLIFQFQGSNIFNVSEAVNDTLIFNTFVLCQIFNEFNSRKLEKQNVFEGILKNHLFLGIVGITVVLQVIMVEFLKKFANTVNLNGWQWGLCIAIAAASWPIGWIVKFLPVSDKPFLSYFKFFKG | 1015 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 9257098 | 9261195 | + | Tan0015363.1 | Tan06g1030 | 755734 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan06g1030 | 1015 | Pfam | Cation transporting ATPase, C-terminus | 829 | 999 | IPR006068 | - | |
| Tan06g1030 | 1015 | SUPERFAMILY | HAD-like | 433 | 849 | IPR036412 | - | |
| Tan06g1030 | 1015 | Gene3D | - | 117 | 311 | - | - | |
| Tan06g1030 | 1015 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 437 | 443 | IPR018303 | - | |
| Tan06g1030 | 1015 | PANTHER | CATION TRANSPORTING ATPASE | 64 | 1002 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) | |
| Tan06g1030 | 1015 | FunFam | Calcium-transporting ATPase | 189 | 311 | - | - | |
| Tan06g1030 | 1015 | FunFam | Calcium-transporting ATPase | 761 | 1003 | - | - | |
| Tan06g1030 | 1015 | Gene3D | - | 432 | 789 | IPR023214 | - | |
| Tan06g1030 | 1015 | PRINTS | P-type cation-transporting ATPase superfamily signature | 768 | 780 | - | - | |
| Tan06g1030 | 1015 | PRINTS | P-type cation-transporting ATPase superfamily signature | 744 | 763 | - | - | |
| Tan06g1030 | 1015 | PRINTS | P-type cation-transporting ATPase superfamily signature | 258 | 272 | - | - | |
| Tan06g1030 | 1015 | PRINTS | P-type cation-transporting ATPase superfamily signature | 435 | 449 | - | - | |
| Tan06g1030 | 1015 | PRINTS | P-type cation-transporting ATPase superfamily signature | 636 | 647 | - | - | |
| Tan06g1030 | 1015 | PRINTS | P-type cation-transporting ATPase superfamily signature | 658 | 668 | - | - | |
| Tan06g1030 | 1015 | SFLD | Haloacid Dehalogenase | 417 | 797 | - | - | |
| Tan06g1030 | 1015 | FunFam | Calcium-transporting ATPase | 637 | 789 | - | - | |
| Tan06g1030 | 1015 | SUPERFAMILY | Calcium ATPase, transduction domain A | 210 | 309 | IPR008250 | - | |
| Tan06g1030 | 1015 | SFLD | p-type atpase | 417 | 797 | IPR044492 | - | |
| Tan06g1030 | 1015 | NCBIfam | HAD-IC family P-type ATPase | 715 | 824 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan06g1030 | 1015 | NCBIfam | HAD-IC family P-type ATPase | 379 | 471 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan06g1030 | 1015 | PRINTS | H+-transporting ATPase (proton pump) signature | 590 | 608 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan06g1030 | 1015 | PRINTS | H+-transporting ATPase (proton pump) signature | 776 | 801 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan06g1030 | 1015 | PRINTS | H+-transporting ATPase (proton pump) signature | 744 | 760 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan06g1030 | 1015 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 59 | 1001 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
| Tan06g1030 | 1015 | Pfam | Cation transporter/ATPase, N-terminus | 95 | 158 | IPR004014 | - | |
| Tan06g1030 | 1015 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 96 | 1001 | IPR023298 | - | |
| Tan06g1030 | 1015 | FunFam | Calcium-transporting ATPase | 445 | 643 | - | - | |
| Tan06g1030 | 1015 | Pfam | Cation transport ATPase (P-type) | 489 | 572 | - | - | |
| Tan06g1030 | 1015 | SMART | Cation_ATPase_N_a_2 | 90 | 164 | IPR004014 | - | |
| Tan06g1030 | 1015 | Pfam | E1-E2 ATPase | 211 | 413 | - | - | |
| Tan06g1030 | 1015 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 442 | 640 | IPR023299 | GO:0000166(InterPro) | |
| Tan06g1030 | 1015 | CDD | P-type_ATPase_Ca_PMCA-like | 116 | 877 | - | - | |
| Tan06g1030 | 1015 | Gene3D | - | 142 | 998 | - | - | |
| Tan06g1030 | 1015 | Gene3D | - | 445 | 643 | IPR023299 | GO:0000166(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan06g1030 | Tan-Chr6:9257098 | Tan08g0432 | Tan-Chr8:4135405 | 0.00E+00 | dispersed | |
| Tan06g1030 | Tan-Chr6:9257098 | Tan01g4694 | Tan-Chr1:112877771 | 6.90E-232 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan06g1030 | K01537 | - | csv:101220140 | 1761.89 |