Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1037 ATGGCGAACAATCATTCCGAGACTCCGGCCGATGATTTCCTCGAGCAGATTCTTGGGATTTCCCCTTTTGGTTCGGCGGAGCAAGGGTTAGCTGGAACTGACGGCGGCTTGGCTGGAGCTGCTGCTGCTGCAGCGGCGGCGGCGGCTCAGGGTCAGGCTCCGATGATGCTTCAGCTTAGCTCCGGCGACGGCGCTGGCCACATCGCTACGCTTGGAAGTGGGAGTGTCGGTGGAGCAGGGTTCCATGGCGGACCCCCTTTTCCTTTGGGGTTGAGCTTGGACCAAGGGAAGAGTGGGTTTCTTAAGGCTGAGGAAGCTTCTGGAAGTGGGAAGCGGTATTGTGGTGAGGTTGTTGATGTTCGAGCTTCTTCTGTGAAAAATGTTTATCAAGGCCAACAAATGCATGCTACTATGGGTGCAACTCCGCATCCACCAGCAATGCGCCCTAGGGTACGAGCCAGACGAGGACAGGCAACTGATCCACATAGCATTGCTGAGCGGTTACGAAGAGAAAGGATTGCAGAGAGAATTAGGGCTTTGCAGGAGCTTGTTCCAAGTGTCAATAAGACGGATAGAGCTGCAATGCTCGATGAAATAGTGGACTACGTAAAGTTCCTACGCCTCCAAGTAAAGGTTCTGAGCATGAGTAGATTGGGTGGAGCTGGTGCTGTGGCACCACTTGTAACGGACATTCCACTATCATCAGTTGAGGAAGAAGGAAGTGAAGGTGGTAGGAATCAACCTGCGTGGGAGAAGTGGTCGAACGACGGTACAGAGAGACAAGTTGCTAAGCTTATGGAAGAGAACGTGGGAGCTGCGATGCAATTCCTACAATCAAAGGCGCTCTGCATCATGCCCATCTCGTTGGCTTCAGCAATTTATCACACGCAACCGCCCGATAGCTCAAGTGTCGTGAAGCCAGAGAGTAACCCTCCATCATAG 942 52.87 MANNHSETPADDFLEQILGISPFGSAEQGLAGTDGGLAGAAAAAAAAAAQGQAPMMLQLSSGDGAGHIATLGSGSVGGAGFHGGPPFPLGLSLDQGKSGFLKAEEASGSGKRYCGEVVDVRASSVKNVYQGQQMHATMGATPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHTQPPDSSSVVKPESNPPS 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9374203 9378717 + Tan0018114.1 Tan06g1037 755741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1037 313 Gene3D - 152 214 IPR036638 GO:0046983(InterPro)
Tan06g1037 313 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 155 216 IPR036638 GO:0046983(InterPro)
Tan06g1037 313 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 98 292 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Tan06g1037 313 MobiDBLite consensus disorder prediction 137 161 - -
Tan06g1037 313 FunFam Basic helix-loop-helix transcription factor 152 214 - -
Tan06g1037 313 MobiDBLite consensus disorder prediction 237 256 - -
Tan06g1037 313 Pfam Helix-loop-helix DNA-binding domain 162 207 IPR011598 GO:0046983(InterPro)
Tan06g1037 313 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 157 206 IPR011598 GO:0046983(InterPro)
Tan06g1037 313 SMART finulus 163 212 IPR011598 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1037 Tan-Chr6:9374203 Tan09g0529 Tan-Chr9:48153103 4.50E-73 dispersed
Tan06g1037 Tan-Chr6:9374203 Tan09g1547 Tan-Chr9:67332375 2.10E-46 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27734 PF00010 HLH 1.20E-07 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1037 - - - 0.0