Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan06g1057 | ATGGAAGAGGTTGAAGAAGCTAACAGAGAAGCTGTGGAGAGTTGTCATAAAGTGTTGAATCTGTTGACTGTGGCGTCGCCTCAAGATCATCAGTCGAAGCTTAGGAGTTGTTTAATGGCGGAAACTGGAGAGGCTGTGTTTAAGTTTAGGAAGGTTTTGTGTCTTCTTGATTCTTCTGGGTTGGGTCATGCAAGGGTCAGGAAAAAGAAGGTTAAGAGTTCTTCCTCCCCCTTTTCTCTTCCCCAATCCATGTTCTTAGAAACTTCTTCCCCTAATTGCAGAATGGACCTTCTCCAGGGGAGGAATTTGCAGATGGGTCCTCTTTCTTTGGGGAACCCATCTTTGGAATTGAGCTCTAATGGCAAAAGTTGTTCAATCCATCAACATCAACAACCTCAATCTGCTGCTGCTCATTATCATCATCATTTCCTTCAGAACAGGGTGTTGTTGAACAATAATCCTAATCCTAATCCTAATGCTCCACAGCCTGAAATGATGCATCTTAGGAGCAATAGTGGCATTAGCTTGAATTTTGATAGCTCTAGCTGCACACAACACACAATGTCATCCACTAGGTCTTTCATTTCTTCATTGAGCATTGATGGGAGTGTGGCTAACTTGGATGGGAGTGCCTTTCATTTGATTGGGGCGCCCCGGTCTTCCGATCAGAATTCGCACCATAAGAGGAAGTGCAGCGGGAGAGGGGAAGATGGGAGTGTTAAATGTGGAAGCACTGGGAGATGTCACTGCTCAAAGAAGAGGAAACATAGAGTGAAGCGGTCGATCAAGGTGCCTGCAATAAGTAATAAGCTTGCAGATATTCCTCCTGATGATTATTCATGGAGGAAATATGGCCAAAAGCCAATCAAGGGTTCTCCTCACCCAAGAGGATACTATAAGTGCAGCAGCATGAGAGGTTGTCCAGCAAGGAAGCACGTCGAGAGGTGTCTCGAGGAACCTTCAATGCTCATTGTTACATATGAAGGTGAACACAACCATCCCAGAATACCTTCTCAATCTACAAATACTTGA | 1032 | 44.57 | MEEVEEANREAVESCHKVLNLLTVASPQDHQSKLRSCLMAETGEAVFKFRKVLCLLDSSGLGHARVRKKKVKSSSSPFSLPQSMFLETSSPNCRMDLLQGRNLQMGPLSLGNPSLELSSNGKSCSIHQHQQPQSAAAHYHHHFLQNRVLLNNNPNPNPNAPQPEMMHLRSNSGISLNFDSSSCTQHTMSSTRSFISSLSIDGSVANLDGSAFHLIGAPRSSDQNSHHKRKCSGRGEDGSVKCGSTGRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIPSQSTNT | 343 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 9693702 | 9696331 | - | Tan0008406.1 | Tan06g1057 | 755761 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan06g1057 | 343 | Gene3D | WRKY domain | 260 | 336 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan06g1057 | 343 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 1 | 340 | IPR044810 | GO:0003700(InterPro) | |
Tan06g1057 | 343 | SMART | WRKY_cls | 275 | 335 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan06g1057 | 343 | MobiDBLite | consensus disorder prediction | 222 | 236 | - | - | |
Tan06g1057 | 343 | ProSiteProfiles | WRKY domain profile. | 270 | 336 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan06g1057 | 343 | FunFam | WRKY transcription factor 65 | 259 | 336 | - | - | |
Tan06g1057 | 343 | MobiDBLite | consensus disorder prediction | 216 | 239 | - | - | |
Tan06g1057 | 343 | Pfam | Plant zinc cluster domain | 228 | 273 | IPR018872 | - | |
Tan06g1057 | 343 | SUPERFAMILY | WRKY DNA-binding domain | 273 | 335 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan06g1057 | 343 | Pfam | WRKY DNA -binding domain | 277 | 334 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g1057 | Tan-Chr6:9693702 | Tan07g2262 | Tan-Chr7:74010122 | 3.50E-71 | dispersed | |
Tan06g1057 | Tan-Chr6:9693702 | Tan06g1058 | Tan-Chr6:9693702 | 2.60E-122 | tandem | |
Tan06g1057 | Tan-Chr6:9693702 | Tan07g2261 | Tan-Chr7:74010122 | 8.90E-99 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27740 | PF03106 | WRKY | 3.40E-26 | CL0274 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan06g1057 | - | - | - | 0.0 |