Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan06g1127 | ATGGATTCGGCGAGGAGTTGGTTTAATAAGCTTCAGCCAAGAGATAGGTTGAGGGGTTCTACGAAGAAGAAGGATAATAGTATGGGAGAGAATCCTGAGGATTCTACTGATCAAACGGATGAAGAAGCGCTTTCTAATATCACTAAGCAGAAGGTTGCTGCGGCAAAGCAGTATATCGAGAATCATTACAAGGAGCAAATGAAGAATCTGCAAGACAGAAAGGAAAGACGAAATGTATTGGAAAGGAAGTTGGCTGATGCTGATGTTTCTGAAGAAGATCAAAACAATTTACTTAAGTTTTTAGAGAAGAAGGAAACTGAATACATGCGCCTCCAAAGGCACAAAATGGGCGTCGATGATTTTGATTTACTAACAATTATTGGCAAAGGTGCTTTTGGGGAGGTTCGTGTTTGTAGAGAGAAGACTACAGGTCAGGTGTATGCTATGAAAAAGCTTAAAAAATCAGAGATGCTTCGAAGGGGCCAGGTGGAGCATGTGAGAGCTGAAAGAAATCTGCTTGCTGAAGTAGACAGTAATTGCATCGTGAAACTCTATTGTTCTTTTCAAGATGATGAGTTTCTTTACCTTATTATGGAGTACCTACCTGGTGGAGATATGATGACTTTATTGATGAGAAAGGATACTTTGACTGAAGATGAAGCAAGGTTTTATGTTGGAGAGATAGTTTTGGCTATTGAATCTATTCATAAGCACAATTACATTCATAGAGATATTAAGCCAGACAACTTGCTGCTTGATAAATTTGGGCACTTGAGACTCTCAGACTTTGGACTATGCAAGCCATTAGATTGCAGTATTCTCCAAGAACAAGATTTTGATGTAGGGAATGTTCGTAATGGAGCTGGACAAACTGATGAGCGCAATGCAGCTCCTACACGTACTCAACAAGAGCAACTGCAACATTGGCAGAAGAATCGCAGAATGCTTGCTTATTCAACAGTTGGAACCCCAGATTATATTGCTCCAGAGGTTTTGTTGAAGAAAGGTTACGGAATGGAATGTGACTGGTGGTCACTTGGAGCAATTATGTATGAAATGCTTGTTGGCTACCCACCGTTTTACTCTGATGATCCAATGTCGACATGTCGGAAGATAGTGAACTGGAGAACTCATTTGAAGTTTCCTGACGAGGCAAAGCTATCTCCCTTGGCAAAAGATCTCATCAGCAAACTACTATGCAATGTTAACCAGAGGCTAGGTACAAATGGCCCGGATGAAATTAAGGTTCATCCGTGGTTTGAATGTACTGAATGGGATAAGCTATACGAAATGGAAGCTGCATTTGTTCCTGAGGTTAAAGATGAGCTAGACACTCAAAATTTTGAAAAGTTCGAAGAGTCTGATTCGCAAAGCAGTACATCATCTAAAACTGGTCCATGGAGAAAGATGCTCTCATCTAAGGACATCAACTTTGTTGGATACACTTACAAGAACTTCGAAATTGTCAACGATTATCAATTGCCTGGGATGGCTGAATTGAAGAAAAAATGCAGCAAACCAAAAAGACCCTCAATCAAGTCACTCTTTGAGGGCGAGTCGGAGGCATCAGATGCCTCTGATATATCTGATCCTCAGCCCACTGGAGGCAGCTTTTCGAACTCAATGACATCTCAACTGGATGTACTTGAAGAGACGAAAGAGTCGATGTAA | 1671 | 40.87 | MDSARSWFNKLQPRDRLRGSTKKKDNSMGENPEDSTDQTDEEALSNITKQKVAAAKQYIENHYKEQMKNLQDRKERRNVLERKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFDLLTIIGKGAFGEVRVCREKTTGQVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGEIVLAIESIHKHNYIHRDIKPDNLLLDKFGHLRLSDFGLCKPLDCSILQEQDFDVGNVRNGAGQTDERNAAPTRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPDEAKLSPLAKDLISKLLCNVNQRLGTNGPDEIKVHPWFECTEWDKLYEMEAAFVPEVKDELDTQNFEKFEESDSQSSTSSKTGPWRKMLSSKDINFVGYTYKNFEIVNDYQLPGMAELKKKCSKPKRPSIKSLFEGESEASDASDISDPQPTGGSFSNSMTSQLDVLEETKESM | 556 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 11113320 | 11123682 | + | Tan0020471.1 | Tan06g1127 | 755831 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan06g1127 | 556 | ProSiteProfiles | Protein kinase domain profile. | 121 | 420 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan06g1127 | 556 | CDD | MobB_NDR_LATS-like | 55 | 116 | - | - | |
Tan06g1127 | 556 | Gene3D | Transferase(Phosphotransferase) domain 1 | 319 | 438 | - | - | |
Tan06g1127 | 556 | Gene3D | Transferase(Phosphotransferase) domain 1 | 205 | 270 | - | - | |
Tan06g1127 | 556 | Coils | Coil | 63 | 83 | - | - | |
Tan06g1127 | 556 | FunFam | Non-specific serine/threonine protein kinase | 319 | 438 | - | - | |
Tan06g1127 | 556 | SUPERFAMILY | Protein kinase-like (PK-like) | 94 | 473 | IPR011009 | - | |
Tan06g1127 | 556 | Gene3D | Phosphorylase Kinase; domain 1 | 439 | 449 | - | - | |
Tan06g1127 | 556 | Gene3D | Phosphorylase Kinase; domain 1 | 119 | 204 | - | - | |
Tan06g1127 | 556 | SMART | pkinase_C_6 | 421 | 485 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan06g1127 | 556 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 240 | 252 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan06g1127 | 556 | MobiDBLite | consensus disorder prediction | 525 | 550 | - | - | |
Tan06g1127 | 556 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 421 | 493 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan06g1127 | 556 | SMART | serkin_6 | 121 | 420 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan06g1127 | 556 | ProSitePatterns | Protein kinases ATP-binding region signature. | 127 | 150 | IPR017441 | GO:0005524(InterPro) | |
Tan06g1127 | 556 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 28 | 488 | IPR050236 | GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER) | |
Tan06g1127 | 556 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
Tan06g1127 | 556 | MobiDBLite | consensus disorder prediction | 503 | 556 | - | - | |
Tan06g1127 | 556 | FunFam | Non-specific serine/threonine protein kinase | 92 | 204 | - | - | |
Tan06g1127 | 556 | CDD | STKc_NDR_like | 119 | 484 | - | - | |
Tan06g1127 | 556 | Pfam | Protein kinase domain | 317 | 420 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan06g1127 | 556 | Pfam | Protein kinase domain | 123 | 270 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan06g1127 | 556 | FunFam | Non-specific serine/threonine protein kinase | 205 | 272 | - | - | |
Tan06g1127 | 556 | Pfam | Protein kinase C terminal domain | 439 | 483 | IPR017892 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan06g1127 | 556 | MobiDBLite | consensus disorder prediction | 9 | 31 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g1127 | Tan-Chr6:11113320 | Tan06g2405 | Tan-Chr6:76338891 | 2.10E-246 | dispersed | |
Tan06g1127 | Tan-Chr6:11113320 | Tan06g1128 | Tan-Chr6:11113320 | 2.40E-303 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67770 | PF00069 | Pkinase | 5.90E-63 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan06g1127 | K08790 | - | csv:101221720 | 1014.22 |