Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan06g1141 | ATGTTCCCAAAATCAAATCATGAAACATTTTCACAAAAGCTGTATCAGACCTTCAAAAATCATAAACGCTTCATCAAGCCAAAATTGGCTCGCTCAGATTTTGCGATTGTTCATTATGCAGGAGATGTGGGACCTATTAGATACAAAATTGAGAGTTTACTACCTCTTAGGCTGTTTTTAAAGTTTAAAAACCTTTTAGACACAACTTTGAAAAAACTTAGTCAATCTTCGTTACATGCACTTTTTCAGGTTCTATATCAGTCAGATCTGTTTCTGGACAAAAATAAAGATTATGTTGTTCCTGAACATCAAGATTTGTTAAGTGCTTCAAAATGTTCTTTTGTTGCTGGCCTCTTCCCTCCTTTTCCTGAGGAGACGGCCAAATCATCAAAGTTTTCTTCAATTGGCTCTCGTTTTAAGTTACAACTACAGCAGTTGATGGAAACATTAAACTCGACAGAGCCCCATTATATAAGATGCGTGAAGCCCAATACTGTCCTACAACCTGCCATATTTGAGAATGCTACTGTTATGCAACAATTACGTTCTGGTGGTGTTTTGGAGGCAGTTAGAATCAAATGTGCAGGATACCCTACTCATAGAACATTTTCCGAATTTTTATCTCGATTTGGAATTCTTGCACCCGAGGTATTGGAAGGGGACTATGAAGAGAAGGTAGCATGCGAAAAGATTCTTGAGAAGATTGGACTTAAAGGTTATCTGATAGGGACATCAAAAATTTTCCTAAGAGGTAATTTGATGGCTGAACTAGATGCACAAAGAACAAGAACGCATAGTGCCGCGGCCATAGCTATACAGAAGCGTATCAGAACTCGAATTGATCGTAAAAAGCACATTGCTACGCGAAAAGGTTGCATTCGTCTACAATCGTATTGGAGAGGTGTTCTTGCTCGTGAGTCATATGAAAGTATGAGAAGAGATGCAGCTGCCATTAAAATTCAAAAGCATATTCGTGGATACCTTGCCAGGAACGTCCATGTTAAAATAAGGATCTCTACCGTTGTTCTTCAGGCTGGTGTGCGAGCAATGATTGCTCGCAGTGAATACAGACATAGGAGGCAGGTTAAGGCTGCAATAGTTATTCAATCTTATTGGCGTCAGTATAGAACCTCTCCAAAGTATAAGATGATTAGAACATCATCAAGCAGTTCACAATGCGGATCGAACACAAGAACCGCTGGTGAAGGTCTTAAGAAGCAAAGGATGACTAACTTGGAAGATACAGAGGAGGATCTGGCCTTGCCTTGTTCGTTGCTCAACAGCAGTACAAACTCCATTGATGAAACAATTGAAAGGATTGCCAAGGAAAGCCATGTTTCTACGAAAGAAGTAGAAGAAGCATACTTTATTATTAAAGAGCCCACTAGTCCGGTTAAAGATGCAGAAAAGATGGCGACTCTCAGAGCAGAAGTGGTTAATCTAAAGGCCCTGTTGCAGGCTGAAAGGCAAAGAGCTAATGAATGTGAAAGGAAGTATGTAGCAGCACAGAGAGCAAGTGAGGAAGGACGTAGAAGACTAAATGAAAATGAAAGGAAGGTGCGTCAACTTCAAGACTGCATAAGCAGGATGGTACATTGCATGTCAAATCAAATCTCAGAGATGAAAATGATCATGAGTTCTAACTCATATGCATCTAGTTCTATTCCAAACGAGGTTCCGATGGATGCCACATCTAGTTGCTCTGATTCATCATCAGAAGACTTCACCTTTCCTGTTCCTAGTACGTCTACGCCAACTTTATCTTCATTTGGTACCAATGCTTTTCAGCTGATAGTGCAGGATATTTCAGCTGCAGGAATTCCAGTGTTCCATTTGCTTTTTGCAGGATCTGACAGTGACAGGGAAGGGGGATTCTCTGACTACTTCTAA | 1890 | 40.26 | MFPKSNHETFSQKLYQTFKNHKRFIKPKLARSDFAIVHYAGDVGPIRYKIESLLPLRLFLKFKNLLDTTLKKLSQSSLHALFQVLYQSDLFLDKNKDYVVPEHQDLLSASKCSFVAGLFPPFPEETAKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNTVLQPAIFENATVMQQLRSGGVLEAVRIKCAGYPTHRTFSEFLSRFGILAPEVLEGDYEEKVACEKILEKIGLKGYLIGTSKIFLRGNLMAELDAQRTRTHSAAAIAIQKRIRTRIDRKKHIATRKGCIRLQSYWRGVLARESYESMRRDAAAIKIQKHIRGYLARNVHVKIRISTVVLQAGVRAMIARSEYRHRRQVKAAIVIQSYWRQYRTSPKYKMIRTSSSSSQCGSNTRTAGEGLKKQRMTNLEDTEEDLALPCSLLNSSTNSIDETIERIAKESHVSTKEVEEAYFIIKEPTSPVKDAEKMATLRAEVVNLKALLQAERQRANECERKYVAAQRASEEGRRRLNENERKVRQLQDCISRMVHCMSNQISEMKMIMSSNSYASSSIPNEVPMDATSSCSDSSSEDFTFPVPSTSTPTLSSFGTNAFQLIVQDISAAGIPVFHLLFAGSDSDREGGFSDYF | 629 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 11365485 | 11383997 | - | Tan0007413.1 | Tan06g1141 | 755845 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan06g1141 | 629 | FunFam | unconventional myosin-Va | 315 | 362 | - | - | |
| Tan06g1141 | 629 | Pfam | IQ calmodulin-binding motif | 289 | 308 | IPR000048 | GO:0005515(InterPro) | |
| Tan06g1141 | 629 | Pfam | IQ calmodulin-binding motif | 363 | 376 | IPR000048 | GO:0005515(InterPro) | |
| Tan06g1141 | 629 | Pfam | IQ calmodulin-binding motif | 339 | 357 | IPR000048 | GO:0005515(InterPro) | |
| Tan06g1141 | 629 | Pfam | IQ calmodulin-binding motif | 315 | 331 | IPR000048 | GO:0005515(InterPro) | |
| Tan06g1141 | 629 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 315 | 385 | IPR027417 | - | |
| Tan06g1141 | 629 | ProSiteProfiles | IQ motif profile. | 313 | 340 | - | - | |
| Tan06g1141 | 629 | ProSiteProfiles | IQ motif profile. | 336 | 365 | - | - | |
| Tan06g1141 | 629 | Coils | Coil | 471 | 505 | - | - | |
| Tan06g1141 | 629 | Gene3D | - | 264 | 315 | - | - | |
| Tan06g1141 | 629 | Gene3D | - | 316 | 365 | - | - | |
| Tan06g1141 | 629 | SMART | MYSc_2a | 4 | 263 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g1141 | 629 | SMART | iq_5 | 360 | 382 | IPR000048 | GO:0005515(InterPro) | |
| Tan06g1141 | 629 | SMART | iq_5 | 264 | 286 | IPR000048 | GO:0005515(InterPro) | |
| Tan06g1141 | 629 | SMART | iq_5 | 335 | 357 | IPR000048 | GO:0005515(InterPro) | |
| Tan06g1141 | 629 | SMART | iq_5 | 287 | 309 | IPR000048 | GO:0005515(InterPro) | |
| Tan06g1141 | 629 | SMART | iq_5 | 312 | 334 | IPR000048 | GO:0005515(InterPro) | |
| Tan06g1141 | 629 | ProSiteProfiles | IQ motif profile. | 288 | 317 | - | - | |
| Tan06g1141 | 629 | Gene3D | - | 1 | 112 | - | - | |
| Tan06g1141 | 629 | Gene3D | Kinesin motor domain | 125 | 196 | IPR036961 | - | |
| Tan06g1141 | 629 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 315 | IPR027417 | - | |
| Tan06g1141 | 629 | ProSiteProfiles | Myosin motor domain profile. | 1 | 262 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g1141 | 629 | Pfam | Myosin head (motor domain) | 81 | 250 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g1141 | 629 | Gene3D | - | 197 | 263 | - | - | |
| Tan06g1141 | 629 | ProSiteProfiles | IQ motif profile. | 361 | 390 | - | - | |
| Tan06g1141 | 629 | PANTHER | MYOSIN | 1 | 537 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan06g1141 | Tan-Chr6:11365485 | Tan09g1110 | Tan-Chr9:63396910 | 3.40E-104 | dispersed | |
| Tan06g1140 | Tan-Chr6:11365293 | Tan06g1141 | Tan-Chr6:11365485 | 6.40E-278 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan06g1141 | K10357 | - | csv:101220626 | 893.264 |