Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1142 ATGGCGGAACTGGAGGATTCAAGATTGCCACCGCCACAAACCATGCAACACGAGGACAAAGCTCAAACACAGACACAGAGAAAACCAAACTTCTGGGACAAGGCTGTCAATATCGTTGTTGGTTCTCAGATATGGGTGGGAGATATAGAGTCTGTTTGGATTGATGGACTCGTATTGAACATCACTGGGGAAGATGCTGAGATTCAAACTAGTGATGGGAGACAGGTGGTTGTAAAAATGTCAAATCTATATCCAAGGGATGCAGAATCTCCTGCTACTGGAATTGATGATATGACTAGAATGTCATATTTGAATGAGCCAGGGTTGCTGCATAATTTGGCTATCAGATATGCAATAAATGAAATCTATACTTACACTGGAAATATTCTTATTGCCATCAACCCATTCCAAAGTATATCAAATCTGTATGATTCCTTTGTGATGGAGCAGTACAAGGGAGCACCAATTGGGGAGCTGAAGCCGCATGTTTTTGCAATTGCTGATGTTGCATATAGGGCTATGATAAATTATGGGAAAAGCAACTCCATTCTGGTAAGTGGTGAAAGTGGGGCGGGTAAGACTGAAACCACCAAAATGCTTATGTGTTACCTTGCATTTTTGGGCGGCCATGCTGCATCAGGAGGACGGACTGTTGAACAACAAGTTTTAGAATCAAATCCAGTTCTTGAAGCTTTTGGCAATGCAAAAACAGTAAGGAACAACAATTCAAGCCGTTTTGGGAAATTTGTTGAGATCCAATTTGACGAGAATGGAAGAATATCAGGAGCTGCCATCAGAACTTATCTTCTTGAGAGATCACGGGTTTGCCAAATATCAGACCCTGAGCGCAACTATCATTGCTTTTATCTTCTCTGTGCAGCTCCACCTCAGGAGAGAGAGAGATATAAGCTGGGAAATCCAAAATCATTCCACTATCTAAACCAATCAAATTGTTATGAACTGGCTGGTGTGAATGATGCTCATGACTATCTTGCTACAAAGAGAGCCATGGATATTGTTGGAATAGGTGAACAAGAGCAGGATGCAATTTTCAGAGTTGTGGCTGCAATTCTTCATCTTGGTAATATTGACTTTGCAAAAGGAGAAGAGTCTGATTCATCATTTGTAAAAGATGAAGAATCAAAATTTCATCTTCACATGACAGCAGAGCTTCTCATGTGTGATCCCCAAGCATTAGAAGATGCTCTTTGCAAGCGCATGATGGTTACACCAGAGGAAATCATCAAGAGAAGTCTTGATCCGCTTGGTGCAACAGTTAACAGGGATGGATTAGCCAAGACAATATATTCTCGTTTGTTTGACTGGTTGGTAGGTAAAATCAATGTTTCCATCGGACAAGATCCTTGCTCTAAATATCTGATCGGAGTCCTGGATATTTATGGTTTTGAGAGCTTTAAAACTAATAGTTTTGAGCAATTCTGCATCAATTACACAAACGAAAAGCTGCAGCAACATTTCAACCAGCACGTATTCAAGATGGAGCAAGAAGAATATGTAAAAGAGGAAATTGATTGGAGCTACATAGAATTTGTTGATAATCAAGATGTCCTCGACCTCATTGAGAAGGACAGACTTATTCTCGGGGAACATGTGATTGAACGAGTTGATAAGAGACTTGGCAAGAGTAAATGCTATTCTACTGAAGGAGTGCCACTTTATTCTCGCGGTGGGTTTTGTACTACTAAAGATGCGTGGAACAAGAAGGAAGATTTGGTGGATCTAAACGGCGACGACGGAGACAACAACAATACAATGTGA 1779 40.75 MAELEDSRLPPPQTMQHEDKAQTQTQRKPNFWDKAVNIVVGSQIWVGDIESVWIDGLVLNITGEDAEIQTSDGRQVVVKMSNLYPRDAESPATGIDDMTRMSYLNEPGLLHNLAIRYAINEIYTYTGNILIAINPFQSISNLYDSFVMEQYKGAPIGELKPHVFAIADVAYRAMINYGKSNSILVSGESGAGKTETTKMLMCYLAFLGGHAASGGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDENGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPPQERERYKLGNPKSFHYLNQSNCYELAGVNDAHDYLATKRAMDIVGIGEQEQDAIFRVVAAILHLGNIDFAKGEESDSSFVKDEESKFHLHMTAELLMCDPQALEDALCKRMMVTPEEIIKRSLDPLGATVNRDGLAKTIYSRLFDWLVGKINVSIGQDPCSKYLIGVLDIYGFESFKTNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYVKEEIDWSYIEFVDNQDVLDLIEKDRLILGEHVIERVDKRLGKSKCYSTEGVPLYSRGGFCTTKDAWNKKEDLVDLNGDDGDNNNTM 592
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 11413587 11424521 - Tan0005609.1 Tan06g1142 755846
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1142 592 FunFam Myosin 2 343 460 - -
Tan06g1142 592 FunFam Myosin heavy chain 283 338 - -
Tan06g1142 592 Gene3D - 283 341 - -
Tan06g1142 592 Pfam Myosin head (motor domain) 96 530 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Tan06g1142 592 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 39 88 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Tan06g1142 592 Gene3D - 470 530 - -
Tan06g1142 592 SMART MYSc_2a 87 592 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Tan06g1142 592 Pfam Myosin N-terminal SH3-like domain 41 80 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Tan06g1142 592 Gene3D Kinesin motor domain 96 469 IPR036961 -
Tan06g1142 592 PANTHER MYOSIN 53 530 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Tan06g1142 592 Gene3D Myosin VI head, motor domain, U50 subdomain 343 453 - -
Tan06g1142 592 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 530 IPR027417 -
Tan06g1142 592 PRINTS Myosin heavy chain signature 227 254 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Tan06g1142 592 PRINTS Myosin heavy chain signature 513 541 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Tan06g1142 592 PRINTS Myosin heavy chain signature 180 205 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Tan06g1142 592 PRINTS Myosin heavy chain signature 123 142 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Tan06g1142 592 PRINTS Myosin heavy chain signature 460 488 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Tan06g1142 592 MobiDBLite consensus disorder prediction 1 27 - -
Tan06g1142 592 ProSiteProfiles Myosin motor domain profile. 93 592 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1142 Tan-Chr6:11413587 Tan08g0390 Tan-Chr8:3538437 8.10E-233 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1142 K10357 - csv:101220626 965.296