Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan06g1142 | ATGGCGGAACTGGAGGATTCAAGATTGCCACCGCCACAAACCATGCAACACGAGGACAAAGCTCAAACACAGACACAGAGAAAACCAAACTTCTGGGACAAGGCTGTCAATATCGTTGTTGGTTCTCAGATATGGGTGGGAGATATAGAGTCTGTTTGGATTGATGGACTCGTATTGAACATCACTGGGGAAGATGCTGAGATTCAAACTAGTGATGGGAGACAGGTGGTTGTAAAAATGTCAAATCTATATCCAAGGGATGCAGAATCTCCTGCTACTGGAATTGATGATATGACTAGAATGTCATATTTGAATGAGCCAGGGTTGCTGCATAATTTGGCTATCAGATATGCAATAAATGAAATCTATACTTACACTGGAAATATTCTTATTGCCATCAACCCATTCCAAAGTATATCAAATCTGTATGATTCCTTTGTGATGGAGCAGTACAAGGGAGCACCAATTGGGGAGCTGAAGCCGCATGTTTTTGCAATTGCTGATGTTGCATATAGGGCTATGATAAATTATGGGAAAAGCAACTCCATTCTGGTAAGTGGTGAAAGTGGGGCGGGTAAGACTGAAACCACCAAAATGCTTATGTGTTACCTTGCATTTTTGGGCGGCCATGCTGCATCAGGAGGACGGACTGTTGAACAACAAGTTTTAGAATCAAATCCAGTTCTTGAAGCTTTTGGCAATGCAAAAACAGTAAGGAACAACAATTCAAGCCGTTTTGGGAAATTTGTTGAGATCCAATTTGACGAGAATGGAAGAATATCAGGAGCTGCCATCAGAACTTATCTTCTTGAGAGATCACGGGTTTGCCAAATATCAGACCCTGAGCGCAACTATCATTGCTTTTATCTTCTCTGTGCAGCTCCACCTCAGGAGAGAGAGAGATATAAGCTGGGAAATCCAAAATCATTCCACTATCTAAACCAATCAAATTGTTATGAACTGGCTGGTGTGAATGATGCTCATGACTATCTTGCTACAAAGAGAGCCATGGATATTGTTGGAATAGGTGAACAAGAGCAGGATGCAATTTTCAGAGTTGTGGCTGCAATTCTTCATCTTGGTAATATTGACTTTGCAAAAGGAGAAGAGTCTGATTCATCATTTGTAAAAGATGAAGAATCAAAATTTCATCTTCACATGACAGCAGAGCTTCTCATGTGTGATCCCCAAGCATTAGAAGATGCTCTTTGCAAGCGCATGATGGTTACACCAGAGGAAATCATCAAGAGAAGTCTTGATCCGCTTGGTGCAACAGTTAACAGGGATGGATTAGCCAAGACAATATATTCTCGTTTGTTTGACTGGTTGGTAGGTAAAATCAATGTTTCCATCGGACAAGATCCTTGCTCTAAATATCTGATCGGAGTCCTGGATATTTATGGTTTTGAGAGCTTTAAAACTAATAGTTTTGAGCAATTCTGCATCAATTACACAAACGAAAAGCTGCAGCAACATTTCAACCAGCACGTATTCAAGATGGAGCAAGAAGAATATGTAAAAGAGGAAATTGATTGGAGCTACATAGAATTTGTTGATAATCAAGATGTCCTCGACCTCATTGAGAAGGACAGACTTATTCTCGGGGAACATGTGATTGAACGAGTTGATAAGAGACTTGGCAAGAGTAAATGCTATTCTACTGAAGGAGTGCCACTTTATTCTCGCGGTGGGTTTTGTACTACTAAAGATGCGTGGAACAAGAAGGAAGATTTGGTGGATCTAAACGGCGACGACGGAGACAACAACAATACAATGTGA | 1779 | 40.75 | MAELEDSRLPPPQTMQHEDKAQTQTQRKPNFWDKAVNIVVGSQIWVGDIESVWIDGLVLNITGEDAEIQTSDGRQVVVKMSNLYPRDAESPATGIDDMTRMSYLNEPGLLHNLAIRYAINEIYTYTGNILIAINPFQSISNLYDSFVMEQYKGAPIGELKPHVFAIADVAYRAMINYGKSNSILVSGESGAGKTETTKMLMCYLAFLGGHAASGGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDENGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPPQERERYKLGNPKSFHYLNQSNCYELAGVNDAHDYLATKRAMDIVGIGEQEQDAIFRVVAAILHLGNIDFAKGEESDSSFVKDEESKFHLHMTAELLMCDPQALEDALCKRMMVTPEEIIKRSLDPLGATVNRDGLAKTIYSRLFDWLVGKINVSIGQDPCSKYLIGVLDIYGFESFKTNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYVKEEIDWSYIEFVDNQDVLDLIEKDRLILGEHVIERVDKRLGKSKCYSTEGVPLYSRGGFCTTKDAWNKKEDLVDLNGDDGDNNNTM | 592 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 11413587 | 11424521 | - | Tan0005609.1 | Tan06g1142 | 755846 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan06g1142 | 592 | FunFam | Myosin 2 | 343 | 460 | - | - | |
| Tan06g1142 | 592 | FunFam | Myosin heavy chain | 283 | 338 | - | - | |
| Tan06g1142 | 592 | Gene3D | - | 283 | 341 | - | - | |
| Tan06g1142 | 592 | Pfam | Myosin head (motor domain) | 96 | 530 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g1142 | 592 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 39 | 88 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g1142 | 592 | Gene3D | - | 470 | 530 | - | - | |
| Tan06g1142 | 592 | SMART | MYSc_2a | 87 | 592 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g1142 | 592 | Pfam | Myosin N-terminal SH3-like domain | 41 | 80 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g1142 | 592 | Gene3D | Kinesin motor domain | 96 | 469 | IPR036961 | - | |
| Tan06g1142 | 592 | PANTHER | MYOSIN | 53 | 530 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Tan06g1142 | 592 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 343 | 453 | - | - | |
| Tan06g1142 | 592 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 67 | 530 | IPR027417 | - | |
| Tan06g1142 | 592 | PRINTS | Myosin heavy chain signature | 227 | 254 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g1142 | 592 | PRINTS | Myosin heavy chain signature | 513 | 541 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g1142 | 592 | PRINTS | Myosin heavy chain signature | 180 | 205 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g1142 | 592 | PRINTS | Myosin heavy chain signature | 123 | 142 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g1142 | 592 | PRINTS | Myosin heavy chain signature | 460 | 488 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan06g1142 | 592 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Tan06g1142 | 592 | ProSiteProfiles | Myosin motor domain profile. | 93 | 592 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan06g1142 | Tan-Chr6:11413587 | Tan08g0390 | Tan-Chr8:3538437 | 8.10E-233 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan06g1142 | K10357 | - | csv:101220626 | 965.296 |