Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan06g1207 ATGGATGAAGATTTTGATATCCCTGCCGCCGCTGAAATGAACGAGGACTTGGATCTTCCTGATGAAACCGTTGCTCTCAAGGTTGGGGAGGAGAAAGAGATTGGAAATCAGGGGTTGAAGAAGAAGCTTTTGAAGGAAGGTGAAGGATGGGTCACTCCTGATAATGGCGATGAGGTTGAAGTTCACTATACTGGGACTTTGCTTGATGGGACTCAGTTTGATTCCAGCCGCGATCGTGGAACCCCGTTTAAGTTCACTCTTGGCCAAGGACAAGTGATTAAAGGATGGGATCTGGGCATCAAAACAATGAAGAAGAGTGAAAAAGCTCTTTTTACCATTCCTCCTGAGCTGGCATACGGTGAATCTGGCTCCCCACCAACCATTCCTCCTAGTGCTACGTTGCAGTTCGATGTTGAGCTACTATCTTGGACAAGCGTTAAGGATATATGTAAGGATGGAGGAATATTCAAGAAGATCCTAACTGAAGGGGACAAATGGGAAAATCCAAAGGACCTTGATGAAGTGCTAGTTAATTTTGAAGCTAAGCTAGAAGATGGAACACTTGTTGCAAAAGCTGATGGAGTGGAATTCACCGTTGGGGATGGTTACTTTTGCCCTGCTCTCGCAAAGGCTGTTAAAACCATGAAGCTAGGTGAAAAGGCACTCCTCACGGTGAAACCACAATATGGGTTTGGGGAGAAAGGTAAATCAGCCTCTAGCAATGAAGGTGCAGTTCCACCAAATGCATCTCTTGATATTACTTTAGAGTTGGTATCTTGGAAGGCCGTTTCAGAAGTTACCCCTGACAAAAAGGTTATCAAGAAAATTCTGAAAGAAGGAGAAGGGTATGAGAAGCCAAATGATGGAGCCATTGTCAAAGTGAAATTGATTGGGAAGTTGGGAGATGGCAAGATATTTTTGAAGAAGGGACATGATGATGGTGAAGAACCATTTGAGTTTAAAACAGATGAAGAACAAGTGATTGATGGCCTCGACAAAGCTGTGGCGACAATGAAGAAAGGTGAGACAGCCCTGCTGACAATAGCACCAGAGTATGCTTTTGGTTCGTCTGAGTCACAACAGGAGTTGGCTGTAGTTCCTCCGAACTCAACTGTGTATTACGAAGTTGAGCTGGTGGCTTTTGACAAGGAGAAGGAATCATGGGATATGAATAACCAGGAAAAGATTGAAGCCGCTGGTAAAAAGAAGGAAGAAGGAAATGTGTTGTTTAAGGCTGGAAAATTTGCTAGAGCTTCCAAGAGATATGAGAAGGCTGTGAAGTTCATTGAATACGATTCTTCATTTAGCGAAGAAGAGAAAAAGCAGGCGAAGGCATTGAAAGTTGCATGCAATTTGAACAATGCAGCTTGTAAATTGAAGCTAAAGCTGTACAACGAGGCAGAGAAATTGTGCACCAAGGTACTTGAACTTGAAAGTTCAAATGTTAAGGCTCTCTATAGAAGGGCACAAGCATACATCCAACTGGCTGATTTGGATTTGGCTGAATTTGACATCAAGAAAGCGCTCGATATCGAACCAAATAACAGGGATGTGAAATTGGAGTACAAAACTCTAAAGGAGAAGGTGAAGGAATACAACAAGAAGGATGCCAAGTTTTACGGCAACATGTTTGCCAAAATGAAGTAG 1647 42.93 MDEDFDIPAAAEMNEDLDLPDETVALKVGEEKEIGNQGLKKKLLKEGEGWVTPDNGDEVEVHYTGTLLDGTQFDSSRDRGTPFKFTLGQGQVIKGWDLGIKTMKKSEKALFTIPPELAYGESGSPPTIPPSATLQFDVELLSWTSVKDICKDGGIFKKILTEGDKWENPKDLDEVLVNFEAKLEDGTLVAKADGVEFTVGDGYFCPALAKAVKTMKLGEKALLTVKPQYGFGEKGKSASSNEGAVPPNASLDITLELVSWKAVSEVTPDKKVIKKILKEGEGYEKPNDGAIVKVKLIGKLGDGKIFLKKGHDDGEEPFEFKTDEEQVIDGLDKAVATMKKGETALLTIAPEYAFGSSESQQELAVVPPNSTVYYEVELVAFDKEKESWDMNNQEKIEAAGKKKEEGNVLFKAGKFARASKRYEKAVKFIEYDSSFSEEEKKQAKALKVACNLNNAACKLKLKLYNEAEKLCTKVLELESSNVKALYRRAQAYIQLADLDLAEFDIKKALDIEPNNRDVKLEYKTLKEKVKEYNKKDAKFYGNMFAKMK 548
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 12544498 12548996 + Tan0007265.1 Tan06g1207 755911
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan06g1207 548 FunFam Peptidylprolyl isomerase 148 261 - -
Tan06g1207 548 Gene3D - 31 147 IPR046357 GO:0003755(InterPro)
Tan06g1207 548 ProSiteProfiles TPR repeat profile. 482 515 IPR019734 GO:0005515(InterPro)
Tan06g1207 548 SMART tpr_5 399 432 IPR019734 GO:0005515(InterPro)
Tan06g1207 548 SMART tpr_5 448 481 IPR019734 GO:0005515(InterPro)
Tan06g1207 548 SMART tpr_5 482 515 IPR019734 GO:0005515(InterPro)
Tan06g1207 548 FunFam Peptidylprolyl isomerase 262 384 - -
Tan06g1207 548 SUPERFAMILY FKBP-like 148 263 - -
Tan06g1207 548 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 283 379 IPR001179 GO:0003755(InterPro)
Tan06g1207 548 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 51 141 IPR001179 GO:0003755(InterPro)
Tan06g1207 548 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 167 257 IPR001179 GO:0003755(InterPro)
Tan06g1207 548 Pfam Tetratricopeptide repeat 483 515 IPR019734 GO:0005515(InterPro)
Tan06g1207 548 FunFam Peptidylprolyl isomerase 29 147 - -
Tan06g1207 548 SUPERFAMILY FKBP-like 32 153 - -
Tan06g1207 548 SUPERFAMILY TPR-like 387 546 IPR011990 GO:0005515(InterPro)
Tan06g1207 548 PANTHER PEPTIDYLPROLYL ISOMERASE 30 143 IPR050754 -
Tan06g1207 548 Coils Coil 515 535 - -
Tan06g1207 548 Gene3D Tetratricopeptide repeat domain 385 542 IPR011990 GO:0005515(InterPro)
Tan06g1207 548 Gene3D - 262 383 IPR046357 GO:0003755(InterPro)
Tan06g1207 548 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 289 382 IPR001179 GO:0003755(InterPro)
Tan06g1207 548 FunFam Peptidylprolyl isomerase 387 542 - -
Tan06g1207 548 Gene3D - 148 261 IPR046357 GO:0003755(InterPro)
Tan06g1207 548 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 56 144 IPR001179 GO:0003755(InterPro)
Tan06g1207 548 SUPERFAMILY FKBP-like 264 399 - -
Tan06g1207 548 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 172 261 IPR001179 GO:0003755(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1207 Tan-Chr6:12544498 Tan10g1176 Tan-Chr10:11837588 6.80E-242 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan06g1207 K09571 - csv:101214513 1005.74